Subcellular Localization
min:
: max
Winner_takes_all: plastid
Predictor Summary:
Predictor Summary:
- plastid 5
- mitochondrion 1
- cytosol 2
| Predictors | GFP | MS/MS | Papers |
|---|---|---|---|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| KXG25976 | Sorghum | cytosol | 22.89 | 78.51 |
| AT5G21010.1 | Thale cress | cytosol | 76.39 | 77.32 |
| HORVU5Hr1G104190.1 | Barley | cytosol | 64.1 | 65.84 |
| GSMUA_Achr5P08970_001 | Banana | cytosol | 63.61 | 65.67 |
| PGSC0003DMT400058456 | Potato | cytosol | 63.86 | 65.43 |
| GSMUA_Achr7P27230_001 | Banana | cytosol | 61.93 | 65.39 |
| VIT_06s0009g01030.t01 | Wine grape | cytosol | 66.27 | 65.01 |
| PGSC0003DMT400070468 | Potato | cytosol | 63.61 | 64.71 |
| Solyc01g009060.2.1 | Tomato | cytosol | 63.13 | 64.69 |
| KRH73429 | Soybean | cytosol, plastid | 61.45 | 64.39 |
| GSMUA_Achr4P14800_001 | Banana | cytosol | 60.96 | 64.38 |
| Solyc11g072070.1.1 | Tomato | cytosol | 63.13 | 64.22 |
| KRH14738 | Soybean | cytosol | 60.96 | 63.89 |
| Zm00001d034400_P003 | Maize | cytosol | 64.58 | 62.62 |
| Zm00001d013094_P001 | Maize | cytosol | 64.1 | 62.15 |
| Os07t0167200-01 | Rice | cytosol | 62.89 | 61.56 |
| TraesCS2D01G246900.1 | Wheat | cytosol, plastid | 63.13 | 61.5 |
| TraesCS5A01G429400.2 | Wheat | cytosol | 64.58 | 61.33 |
| EER90755 | Sorghum | cytosol | 63.37 | 61.31 |
| TraesCS2B01G262200.1 | Wheat | cytosol | 62.89 | 61.27 |
| TraesCS2A01G237800.1 | Wheat | cytosol | 62.65 | 61.03 |
| TraesCS5B01G431400.2 | Wheat | cytosol | 63.86 | 60.64 |
| Zm00001d018887_P002 | Maize | cytosol | 61.45 | 59.03 |
| KXG34465 | Sorghum | cytosol | 62.41 | 58.73 |
| TraesCS5D01G437400.1 | Wheat | cytosol | 63.86 | 57.48 |
| HORVU2Hr1G055140.1 | Barley | cytosol | 62.65 | 56.64 |
| AT3G03740.1 | Thale cress | cytosol | 62.89 | 56.13 |
| AT3G06190.1 | Thale cress | cytosol | 49.88 | 50.99 |
| AT2G39760.1 | Thale cress | cytosol | 48.67 | 49.51 |
| AT5G19000.2 | Thale cress | plastid | 50.12 | 47.06 |
Protein Annotations
| Gene3D:1.25.40.420 | Gene3D:2.60.210.10 | Gene3D:3.30.710.10 | MapMan:35.1 | EntrezGene:823478 | UniProt:A0A178VLP8 |
| UniProt:A1L4W5 | ProteinID:AEE77819.1 | ArrayExpress:AT3G43700 | EnsemblPlantsGene:AT3G43700 | RefSeq:AT3G43700 | TAIR:AT3G43700 |
| RefSeq:AT3G43700-TAIR-G | EnsemblPlants:AT3G43700.1 | TAIR:AT3G43700.1 | Symbol:ATBPM6 | EMBL:BT029752 | InterPro:BTB/POZ_dom |
| ProteinID:CAB83071.1 | GO:GO:0003674 | GO:GO:0005488 | GO:GO:0005515 | GO:GO:0005575 | GO:GO:0005622 |
| GO:GO:0005623 | GO:GO:0005634 | GO:GO:0005737 | GO:GO:0005829 | GO:GO:0006464 | GO:GO:0006950 |
| GO:GO:0006970 | GO:GO:0008150 | GO:GO:0008152 | GO:GO:0009628 | GO:GO:0009987 | GO:GO:0016567 |
| GO:GO:0019538 | GO:GO:0071472 | InterPro:IPR000210 | InterPro:IPR002083 | InterPro:IPR008974 | InterPro:MATH/TRAF_dom |
| RefSeq:NP_189956.2 | ProteinID:OAP06674.1 | PFAM:PF00651 | PFAM:PF00917 | PO:PO:0000013 | PO:PO:0000014 |
| PO:PO:0000037 | PO:PO:0000230 | PO:PO:0000293 | PO:PO:0001016 | PO:PO:0001017 | PO:PO:0001054 |
| PO:PO:0001078 | PO:PO:0001081 | PO:PO:0001185 | PO:PO:0004507 | PO:PO:0007064 | PO:PO:0007095 |
| PO:PO:0007098 | PO:PO:0007103 | PO:PO:0007115 | PO:PO:0007123 | PO:PO:0007611 | PO:PO:0007616 |
| PO:PO:0008019 | PO:PO:0009005 | PO:PO:0009006 | PO:PO:0009009 | PO:PO:0009010 | PO:PO:0009025 |
| PO:PO:0009029 | PO:PO:0009030 | PO:PO:0009031 | PO:PO:0009032 | PO:PO:0009046 | PO:PO:0009047 |
| PO:PO:0009052 | PO:PO:0020030 | PO:PO:0020100 | PO:PO:0020137 | PO:PO:0025022 | PO:PO:0025195 |
| PO:PO:0025281 | PFscan:PS50097 | PFscan:PS50144 | PANTHER:PTHR24411 | PANTHER:PTHR24411:SF52 | InterPro:SKP1/BTB/POZ_sf |
| SMART:SM00061 | SMART:SM00225 | SUPFAM:SSF49599 | SUPFAM:SSF54695 | InterPro:TRAF-like | UniParc:UPI0000196F3B |
Description
BPM6BTB/POZ and MATH domain-containing protein 6 [Source:UniProtKB/Swiss-Prot;Acc:A1L4W5]
Coordinates
chr3:+:15601754..15603888
Molecular Weight (calculated)
45750.2 Da
IEP (calculated)
7.339
GRAVY (calculated)
-0.253
Length
415 amino acids
Sequence
(BLAST)
(BLAST)
001: MSKLMTRTSG SSSPNTIPDQ IESPTSSRSV TQTTNGSHQF VIQGYSLAKG IGVGKHIASD NFSVGGYQWT IFVYPDGKNP EDNSSYVSVF IVLASECTEV
101: RALFELSLVD QSGKGKHKVH SHFNRSLDGG PYTLKYRGSM WGYKRFFRRS LLETSDYLKD DCLKINCTVG VVVSEMHCPR LLSIHVPDSE LGSHFGKLLD
201: TLQGSDVTFD VAGEKFQAHK LVLAARSQFF RSMFYNTLAE NNSDVVISDL EPKVFKALLH FMYKDSLPGD VEPLTAHSFD LLRPSEIDDT LIVKLLAAAE
301: MYNLSRLRLL CESHICKGIS ISSVSKILAL SDKYNASELK SVSLKFTAEN LAAVLQTKAY EDLKDDCPNL QSELLKAVAG YDDTSSSGGG KSQSVWAQLS
401: NGGETSSRRV RQRTT
101: RALFELSLVD QSGKGKHKVH SHFNRSLDGG PYTLKYRGSM WGYKRFFRRS LLETSDYLKD DCLKINCTVG VVVSEMHCPR LLSIHVPDSE LGSHFGKLLD
201: TLQGSDVTFD VAGEKFQAHK LVLAARSQFF RSMFYNTLAE NNSDVVISDL EPKVFKALLH FMYKDSLPGD VEPLTAHSFD LLRPSEIDDT LIVKLLAAAE
301: MYNLSRLRLL CESHICKGIS ISSVSKILAL SDKYNASELK SVSLKFTAEN LAAVLQTKAY EDLKDDCPNL QSELLKAVAG YDDTSSSGGG KSQSVWAQLS
401: NGGETSSRRV RQRTT
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.