Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- nucleus 2
- cytosol 5
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers |
|---|---|---|---|
PPI
Inferred distinct locusB in Crop
Inferred from Arabidopsis experimental PPI
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| GSMUA_Achr8P16990_001 | Banana | cytosol | 96.61 | 96.61 |
| GSMUA_Achr7P18000_001 | Banana | cytosol | 92.94 | 92.94 |
| EES05529 | Sorghum | cytosol | 85.03 | 81.79 |
| GSMUA_AchrUn_... | Banana | cytosol | 68.64 | 81.68 |
| Os02t0746000-01 | Rice | cytosol | 84.6 | 81.39 |
| TraesCS6B01G335200.1 | Wheat | cytosol | 84.46 | 81.25 |
| TraesCS6D01G285800.1 | Wheat | cytosol | 84.32 | 81.11 |
| TraesCS6A01G306600.1 | Wheat | cytosol | 84.18 | 80.98 |
| Zm00001d018043_P001 | Maize | cytosol | 84.04 | 80.84 |
| PGSC0003DMT400003338 | Potato | cytosol | 83.33 | 80.49 |
| KRH18483 | Soybean | cytosol | 83.33 | 80.49 |
| Solyc02g087900.2.1 | Tomato | cytosol | 83.19 | 80.35 |
| KRG93520 | Soybean | cytosol | 83.19 | 80.35 |
| VIT_01s0026g02230.t01 | Wine grape | cytosol | 83.05 | 80.22 |
| HORVU6Hr1G075720.2 | Barley | cytosol | 83.9 | 79.62 |
| Solyc01g010820.2.1 | Tomato | cytosol | 82.2 | 79.29 |
| PGSC0003DMT400016765 | Potato | cytosol | 81.78 | 78.88 |
| KRH45896 | Soybean | cytosol | 79.94 | 77.32 |
| KRG99095 | Soybean | cytosol | 79.94 | 77.32 |
| VIT_14s0108g00490.t01 | Wine grape | cytosol | 85.59 | 77.3 |
| AT1G69670.1 | Thale cress | cytosol | 79.66 | 77.05 |
| AT1G26830.1 | Thale cress | cytosol | 78.95 | 76.37 |
| Bra016291.1-P | Field mustard | cytosol | 78.95 | 76.37 |
| CDY45004 | Canola | cytosol | 78.81 | 76.23 |
| CDY46437 | Canola | cytosol | 78.81 | 76.23 |
| CDY16196 | Canola | cytosol | 78.67 | 76.09 |
| CDY50732 | Canola | cytosol | 78.67 | 76.09 |
| Bra024680.1-P | Field mustard | cytosol | 78.39 | 75.82 |
| KRH70713 | Soybean | cytosol | 70.62 | 68.78 |
| GSMUA_Achr2P07360_001 | Banana | mitochondrion | 34.32 | 62.79 |
| GSMUA_Achr4P22850_001 | Banana | cytosol | 40.68 | 35.87 |
| GSMUA_AchrUn_... | Banana | cytosol | 36.44 | 35.49 |
| GSMUA_Achr7P03700_001 | Banana | cytosol | 37.01 | 35.22 |
| GSMUA_Achr1P14740_001 | Banana | cytosol | 36.72 | 34.95 |
| GSMUA_Achr7P01270_001 | Banana | cytosol | 40.4 | 32.69 |
| GSMUA_Achr1P26690_001 | Banana | cytosol | 33.9 | 32.21 |
| GSMUA_Achr9P17620_001 | Banana | cytosol | 32.2 | 30.94 |
Protein Annotations
| Gene3D:1.10.10.10 | Gene3D:1.10.10.2620 | Gene3D:1.20.1310.10 | MapMan:19.2.2.8.2.1 | InterPro:Cullin_N | InterPro:Cullin_homology |
| InterPro:Cullin_homology_sf | InterPro:Cullin_neddylation_domain | InterPro:Cullin_repeat-like_dom_sf | GO:GO:0003674 | GO:GO:0005488 | GO:GO:0005515 |
| GO:GO:0006511 | GO:GO:0008150 | GO:GO:0008152 | GO:GO:0009056 | GO:GO:0009987 | GO:GO:0019538 |
| GO:GO:0031625 | EnsemblPlantsGene:GSMUA_AchrUn_randomG01370_001 | EnsemblPlants:GSMUA_AchrUn_randomP01370_001 | EnsemblPlants:GSMUA_AchrUn_randomT01370_001 | InterPro:IPR016158 | InterPro:IPR036388 |
| UniProt:M0U5E9 | PFAM:PF00888 | PFAM:PF10557 | PFscan:PS50069 | PANTHER:PTHR11932 | PANTHER:PTHR11932:SF74 |
| SMART:SM00182 | SMART:SM00884 | SUPFAM:SSF46785 | SUPFAM:SSF74788 | SUPFAM:SSF75632 | UniParc:UPI000296B09D |
| InterPro:WH-like_DNA-bd_sf | InterPro:WH_DNA-bd_sf | SEG:seg | : | : | : |
Description
Cullin-3A [Source:GMGC_GENE;Acc:GSMUA_AchrUn_randomG01370_001]
Coordinates
chrchrUn_random:-:5331288..5336638
Molecular Weight (calculated)
82228.1 Da
IEP (calculated)
7.636
GRAVY (calculated)
-0.443
Length
708 amino acids
Sequence
(BLAST)
(BLAST)
001: MSAQKKRNFK IEAFKHRVEL DPNYAERTWR VLEHAIHEIY NHNASGLSFE ELYRNAYNMV LHKYGEKLYT GLVNTMTGHL KEIARSIESA QGGFFLEELN
101: VKWGDHNKAL QMIRDILMYM DRTFVHSSHK TPVHELGLNL WRDNIIHSSK IQSRLLDMLL DLIHRERTGE VINRGLMRNI TKMLMDLGSS VYQEDFEKPF
201: LEVSASFYSV ESQQLIECCD CGEYLRKAER RLSEEIERVS HYLDVKSEVK ITSVVEGEMI ANHMQRLVHM ENSGLVSMLV DDKYEDLSRM YNLFRRVPDG
301: LSTIKDVMTS HLRDTGKQLV SDPEKLKDPV DFVQNLLDEK DKYDKIITKA FNNDKTFQNA LNSSFEYFIN LNNRSPEFIS LYVDDKLRKG LKGVSEEDVE
401: VVLDKVMMLF RYLQEKDVFE KYYKQHLAKR LLAGKSVSDD TERSMIVKLK TECGYQFTSK LEGMFTDMKT SVDTMQGFYT SQYSEIGDGP TLAVQVLTTG
501: SWPTQPSAPC NLPAEILVIC EKFRTYYLGT RTGRRLTWQT NMGTADIKAT FGKGQRHELN VSTYQMCILM LFNSVDRLTY GEIEQATEIP PSDLKRCLQS
601: LACVKGKNVL RKEPMSKDIA EDDAFYFNDK FTSKFIKVKI GTIEAAIVRI MKSRRVLDHN TIVTEVTSQL QSRFLPNPVV IKKRIESLIE REFLERDKVD
701: RKLYRYLA
101: VKWGDHNKAL QMIRDILMYM DRTFVHSSHK TPVHELGLNL WRDNIIHSSK IQSRLLDMLL DLIHRERTGE VINRGLMRNI TKMLMDLGSS VYQEDFEKPF
201: LEVSASFYSV ESQQLIECCD CGEYLRKAER RLSEEIERVS HYLDVKSEVK ITSVVEGEMI ANHMQRLVHM ENSGLVSMLV DDKYEDLSRM YNLFRRVPDG
301: LSTIKDVMTS HLRDTGKQLV SDPEKLKDPV DFVQNLLDEK DKYDKIITKA FNNDKTFQNA LNSSFEYFIN LNNRSPEFIS LYVDDKLRKG LKGVSEEDVE
401: VVLDKVMMLF RYLQEKDVFE KYYKQHLAKR LLAGKSVSDD TERSMIVKLK TECGYQFTSK LEGMFTDMKT SVDTMQGFYT SQYSEIGDGP TLAVQVLTTG
501: SWPTQPSAPC NLPAEILVIC EKFRTYYLGT RTGRRLTWQT NMGTADIKAT FGKGQRHELN VSTYQMCILM LFNSVDRLTY GEIEQATEIP PSDLKRCLQS
601: LACVKGKNVL RKEPMSKDIA EDDAFYFNDK FTSKFIKVKI GTIEAAIVRI MKSRRVLDHN TIVTEVTSQL QSRFLPNPVV IKKRIESLIE REFLERDKVD
701: RKLYRYLA
001: MSNQKKRNFQ IEAFKHRVVV DPKYADKTWQ ILERAIHQIY NQDASGLSFE ELYRNAYNMV LHKFGEKLYT GFIATMTSHL KEKSKLIEAA QGGSFLEELN
101: KKWNEHNKAL EMIRDILMYM DRTYIESTKK THVHPMGLNL WRDNVVHFTK IHTRLLNTLL DLVQKERIGE VIDRGLMRNV IKMFMDLGES VYQEDFEKPF
201: LDASSEFYKV ESQEFIESCD CGDYLKKSEK RLTEEIERVA HYLDAKSEEK ITSVVEKEMI ANHMQRLVHM ENSGLVNMLL NDKYEDLGRM YNLFRRVTNG
301: LVTVRDVMTS HLREMGKQLV TDPEKSKDPV EFVQRLLDER DKYDKIINTA FGNDKTFQNA LNSSFEYFIN LNARSPEFIS LFVDDKLRKG LKGITDVDVE
401: VILDKVMMLF RYLQEKDVFE KYYKQHLAKR LLSGKTVSDD AERSLIVKLK TECGYQFTSK LEGMFTDMKT SEDTMRGFYG SHPELSEGPT LIVQVLTTGS
501: WPTQPAVPCN LPAEVSVLCE KFRSYYLGTH TGRRLSWQTN MGTADIKAIF GKGQKHELNV STFQMCVLML FNNSDRLSYK EIEQATEIPA ADLKRCLQSL
601: ACVKGKNVIK KEPMSKDIGE EDLFVVNDKF TSKFYKVKIG TVVAQKETEP EKQETRQRVE EDRKPQIEAA IVRIMKSRKI LDHNNIIAEV TKQLQPRFLA
701: NPTEIKKRIE SLIERDFLER DSTDRKLYRY LA
101: KKWNEHNKAL EMIRDILMYM DRTYIESTKK THVHPMGLNL WRDNVVHFTK IHTRLLNTLL DLVQKERIGE VIDRGLMRNV IKMFMDLGES VYQEDFEKPF
201: LDASSEFYKV ESQEFIESCD CGDYLKKSEK RLTEEIERVA HYLDAKSEEK ITSVVEKEMI ANHMQRLVHM ENSGLVNMLL NDKYEDLGRM YNLFRRVTNG
301: LVTVRDVMTS HLREMGKQLV TDPEKSKDPV EFVQRLLDER DKYDKIINTA FGNDKTFQNA LNSSFEYFIN LNARSPEFIS LFVDDKLRKG LKGITDVDVE
401: VILDKVMMLF RYLQEKDVFE KYYKQHLAKR LLSGKTVSDD AERSLIVKLK TECGYQFTSK LEGMFTDMKT SEDTMRGFYG SHPELSEGPT LIVQVLTTGS
501: WPTQPAVPCN LPAEVSVLCE KFRSYYLGTH TGRRLSWQTN MGTADIKAIF GKGQKHELNV STFQMCVLML FNNSDRLSYK EIEQATEIPA ADLKRCLQSL
601: ACVKGKNVIK KEPMSKDIGE EDLFVVNDKF TSKFYKVKIG TVVAQKETEP EKQETRQRVE EDRKPQIEAA IVRIMKSRKI LDHNNIIAEV TKQLQPRFLA
701: NPTEIKKRIE SLIERDFLER DSTDRKLYRY LA
Arabidopsis Description
CUL3ACUL3A [Source:UniProtKB/TrEMBL;Acc:A0A178WM88]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.