Factsheet for GSMUA_Achr9P06030_001

Subcellular Localization

min:

: max

Winner_takes_all: endoplasmic reticulum

Predictor Summary:

nucleus 1
vacuole 2
endoplasmic reticulum 3
golgi 2
extracellular 2
cytosol 1
plasma membrane 2

Predictors

GFP

MS/MS

Papers

Winner Takes All:	endoplasmic reticulum
Any Predictor:	cytosol, nucleus, secretory
BaCelLo:	nucleus
EpiLoc:	vacuole
MultiLoc:	endoplasmic reticulum
Plant-mPloc:	cytosol, extracellular, golgi
PProwler:	secretory
WoLF PSORT:	endoplasmic reticulum
YLoc:	plasma membrane

PPI

Inferred distinct locusB in Crop

locusB	locations
GSMUA_Achr7P18000_001
GSMUA_Achr8P16990_001
GSMUA_AchrUn_...
GSMUA_AchrUn_...

Inferred from Arabidopsis experimental PPI

Ath locusA	locusB	Ath locusB	Paper
AT4G07670.1	GSMUA_Achr7P18000_001	AT1G26830.1	15749712
AT4G07670.1	GSMUA_Achr8P16990_001	AT1G26830.1	15749712
AT4G07670.1	GSMUA_AchrUn_...	AT1G26830.1	15749712
AT4G07670.1	GSMUA_AchrUn_...	AT1G26830.1	15749712
AT4G07670.1	GSMUA_Achr7P18000_001	AT1G69670.1	15749712
AT4G07670.1	GSMUA_Achr8P16990_001	AT1G69670.1	15749712
AT4G07670.1	GSMUA_AchrUn_...	AT1G69670.1	15749712
AT4G07670.1	GSMUA_AchrUn_...	AT1G69670.1	15749712

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
HORVU0Hr1G020860.1	Barley	cytosol	14.01	71.43
Solyc12g008540.1.1	Tomato	extracellular	7.96	64.29
KRH74227	Soybean	cytosol	19.03	62.62
Solyc12g008550.1.1	Tomato	cytosol, endoplasmic reticulum, extracellular, golgi, plasma membrane, vacuole	23.3	61.0
Os01t0740600-01	Rice	cytosol	7.82	60.92
HORVU3Hr1G070540.14	Barley	cytosol, extracellular	33.19	59.68
PGSC0003DMT400000952	Potato	endoplasmic reticulum, plasma membrane, vacuole	60.91	59.6
CDY42292	Canola	endoplasmic reticulum, plasma membrane	57.82	57.99
Os01t0743300-01	Rice	cytosol, endoplasmic reticulum, plasma membrane	61.8	57.55
CDY35864	Canola	plasma membrane, plastid	56.64	57.48
CDX92505	Canola	plasma membrane, plastid	56.34	57.1
AT5G19740.1	Thale cress	vacuole	57.08	56.83
TraesCS3A01G275800.1	Wheat	cytosol, endoplasmic reticulum, plasma membrane	60.47	56.55
EES01459	Sorghum	cytosol, endoplasmic reticulum, peroxisome, plastid	59.88	55.92
KRH74232	Soybean	endoplasmic reticulum, plastid	41.15	55.69
Zm00001d012765_P005	Maize	extracellular	59.44	55.59
VIT_11s0016g03010.t01	Wine grape	cytosol	62.68	55.12
TraesCS3D01G275800.2	Wheat	cytosol, endoplasmic reticulum, plasma membrane	60.77	54.93
TraesCS3B01G309500.4	Wheat	cytosol, endoplasmic reticulum, plasma membrane	60.62	54.8
KXG33331	Sorghum	endoplasmic reticulum, plasma membrane, plastid	58.85	54.51
Os01t0740650-00	Rice	cytosol, mitochondrion, plasma membrane, plastid	35.99	53.98
TraesCS3A01G276800.2	Wheat	plastid	57.96	53.91
Zm00001d043517_P002	Maize	mitochondrion	59.0	53.84
TraesCS3B01G311000.1	Wheat	plastid	57.82	53.77
Os01t0740500-00	Rice	plastid	57.96	53.76
TraesCS3D01G277000.1	Wheat	plastid	57.37	53.36
HORVU3Hr1G070790.1	Barley	peroxisome, plasma membrane	60.03	53.27
HORVU3Hr1G070550.5	Barley	mitochondrion	58.55	53.0
Zm00001d043519_P004	Maize	plastid	56.93	52.73
TraesCS3D01G276900.1	Wheat	plastid	57.67	52.41
TraesCS3D01G275700.1	Wheat	cytosol, endoplasmic reticulum, mitochondrion, nucleus	59.73	52.19
AT4G07670.1	Thale cress	cytosol	21.24	51.43
TraesCS3B01G310900.1	Wheat	cytosol	58.55	49.62
TraesCS3A01G276700.1	Wheat	cytosol	57.96	49.0
HORVU0Hr1G020840.1	Barley	plastid	13.86	48.21
GSMUA_Achr4P31300_001	Banana	cytosol	27.14	47.3
HORVU3Hr1G070560.2	Barley	plastid	24.63	45.38
GSMUA_Achr5P02690_001	Banana	mitochondrion	41.0	39.83
HORVU0Hr1G020850.2	Barley	plastid	18.88	32.0
CDY44276	Canola	plastid	7.23	29.34

Protein Annotations

Gene3D:1.20.930.40	MapMan:19.4.5.7.3	Gene3D:3.40.630.10	Gene3D:3.50.30.30	ncoils:Coil	EnsemblPlantsGene:GSMUA_Achr9G06030_001
EnsemblPlants:GSMUA_Achr9P06030_001	EnsemblPlants:GSMUA_Achr9T06030_001	InterPro:IPR036757	UniProt:M0TXW2	InterPro:PA_domain	PFAM:PF02225
PFAM:PF04253	PFAM:PF04389	PANTHER:PTHR10404	PANTHER:PTHR10404:SF45	InterPro:Peptidase_M28	SUPFAM:SSF47672
SUPFAM:SSF52025	SUPFAM:SSF53187	InterPro:TFR-like_dimer_dom	InterPro:TFR-like_dimer_dom_sf	TMHMM:TMhelix	UniParc:UPI0002969F47
SEG:seg	:	:	:	:	:

Description

Putative Probable glutamate carboxypeptidase 2 [Source:GMGC_GENE;Acc:GSMUA_Achr9G06030_001]

Coordinates

chr9:-:3848856..3855704

Molecular Weight (calculated)

73676.3 Da

IEP (calculated)

5.990

GRAVY (calculated)

-0.141

Length

678 amino acids

Sequence
(BLAST)

001: METRMMDTSS LEKTPLLDRT ATGAPSARLL IAGVLLFILL LLGLTASPPS KATYHSLFLS LGDNATAARH LFALTRSPHV AGTPANADAA SYVRSALSAA
101: SCPAHVASYD VLLSYPIYPG VPYADAAAEA LPAFHAYARS GSAAGPAVYA NYGRVEDFAN LRAMGVNVTG AVVLARYGKI YRGEIVRNAA AVGAAAAVVY
201: TDSKDYSGDR WFPDGPGMPP SGVQAGSTAA EVATSGMTPG IPSLPVSARD GEAIQRSIGG QAAPHDWQGG EGAPVYRLGP GPGFLNLTYI GNETLATIEN
301: VCAMIEGEDE PDRYVILGNH RDAWTFGAVD PNSGTAALLE IAQRLGKLRK RGWRPRRTIV FCNWDAEEYG LIGSTEWVEE NKEMLASRAI AYLNVDCAAG
401: GPGFHASTTP QLDEIIKQAT KKVQDPDNFS QMVYDSWVNS NDSKLIGRLG GRGTDFAAFV QHVGVPSIDM FFGGGYPVYH SLYDDFVWMQ KFGDPLFHRQ
501: VAVASIWGLV ALRLADDEFL PFNYISYALE LQGSTKTLED RALGMPVTFT PLYRSIEELE KAATNIDKEK KALELEVGLV GRRKDLLKVR ELNDRLMMAE
601: RAFTDREGLF HREWYKHLIY GPSLHDDYGS NSFPGIDDAI EKAKSLNTSD SWRFVQHEVW RAARVVTQAS LVLHGKFT

Best Arabidopsis Sequence Match ( AT5G19740.1 )
(BLAST)

001: MSKSKSLAFV IAALSYSFFS LFSSPPKSHY HELFISTSFS DNASVALNLH TLTRRPHVAG TVANAEAAEY VRSVFTSSAL KSHVVAYQVS LTYPVHRSLV
101: LTPTDSAKPI TFLLEQEKLG DNPYANEVMP TFHGYAKSGN VSGPVVYANY GRVEDFVRLK KDMGVNVSGA VVIARYGQIY RGDIVKNAYE AGAVGVVIYT
201: DKRDYGGDEW FPASKWMPPS GVQVGTVYNG LGDPTTPGWA SVDGCERLSD EAVELSGDVP LIPSLPVSAA DAEVILKTVV GDVSDGDVYP VGPGPGVLNL
301: SYIGETVIAK IENVIGVIEG EEEPDRYVIL GNHRDAWTFG AVDPNSGTAV LMEIAQRLDK LQKRGWKPRR TIILCNWDAE EYGLIGSTEW VEENREMLSS
401: RAVAYLNVDC AVSGPGFHAS ATPQLDELIK VAAQEVRDPD NATQTIYESW IGSSDSVVIR RLGGGGSDYA SFVQHVGVPG VDMSFGRGYP VYHSMYDDFT
501: WMEKFGDPMF QRHVAMASVL GLVALRLADE EIIPFNYTSY ALELKKSAED LENEKLGHNI DVSTLIKSIE DLSTAAKHIS LEKEAIKGAL KVRELNDRLM
601: MAERALTDRD GLSERPWYKH LIYGPSKYDD YGSKSFPGVD DAIDNAKKLN TKASWENVQH QIWRVSRAIR HASLVLKGEL I

Arabidopsis Description

LAMP1Probable glutamate carboxypeptidase LAMP1 [Source:UniProtKB/Swiss-Prot;Acc:Q7Y228]
SUBAcon: [vacuole]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.