Subcellular Localization
min:
: max
Winner_takes_all: mitochondrion
Predictor Summary:
Predictor Summary:
- mitochondrion 4
- plasma membrane 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| TraesCS3D01G276900.1 | Wheat | plastid | 90.79 | 91.15 |
| HORVU0Hr1G020840.1 | Barley | plastid | 23.5 | 90.26 |
| Os01t0740600-01 | Rice | cytosol | 10.41 | 89.66 |
| TraesCS3B01G310900.1 | Wheat | cytosol | 86.38 | 80.88 |
| TraesCS3A01G276700.1 | Wheat | cytosol | 85.98 | 80.3 |
| Zm00001d043517_P002 | Maize | mitochondrion | 79.17 | 79.81 |
| Os01t0740650-00 | Rice | cytosol, mitochondrion, plasma membrane, plastid | 44.99 | 74.56 |
| HORVU0Hr1G020860.1 | Barley | cytosol | 12.15 | 68.42 |
| HORVU3Hr1G070560.2 | Barley | plastid | 30.31 | 61.68 |
| HORVU3Hr1G070540.14 | Barley | cytosol, extracellular | 29.51 | 58.62 |
| GSMUA_Achr9P06030_001 | Banana | endoplasmic reticulum | 53.0 | 58.55 |
| HORVU3Hr1G070790.1 | Barley | peroxisome, plasma membrane | 57.54 | 56.41 |
| HORVU0Hr1G020850.2 | Barley | plastid | 25.5 | 47.75 |
| HORVU5Hr1G103900.13 | Barley | cytosol | 22.3 | 41.75 |
| HORVU3Hr1G104570.2 | Barley | plastid | 13.08 | 32.56 |
| HORVU6Hr1G029960.1 | Barley | mitochondrion | 8.28 | 32.29 |
| HORVU5Hr1G007810.6 | Barley | endoplasmic reticulum, plasma membrane, plastid | 12.68 | 31.46 |
| HORVU3Hr1G080240.1 | Barley | plastid | 12.28 | 30.56 |
| HORVU5Hr1G103870.2 | Barley | mitochondrion | 8.81 | 17.28 |
Protein Annotations
| Gene3D:1.20.930.40 | MapMan:19.4.5.7.3 | Gene3D:3.40.630.10 | Gene3D:3.50.30.30 | UniProt:A0A287LJH9 | EnsemblPlantsGene:HORVU3Hr1G070550 |
| EnsemblPlants:HORVU3Hr1G070550.5 | InterPro:IPR006311 | InterPro:IPR036757 | InterPro:PA_domain | PFAM:PF02225 | PFAM:PF04253 |
| PFAM:PF04389 | PFscan:PS51318 | PANTHER:PTHR10404 | PANTHER:PTHR10404:SF45 | InterPro:Peptidase_M28 | SUPFAM:SSF47672 |
| SUPFAM:SSF52025 | SUPFAM:SSF53187 | InterPro:TAT_signal | InterPro:TFR-like_dimer_dom | InterPro:TFR-like_dimer_dom_sf | UniParc:UPI000B4774A3 |
| SEG:seg | : | : | : | : | : |
Description
No Description!
Coordinates
chrchr3H:+:533296638..533300589
Molecular Weight (calculated)
81276.7 Da
IEP (calculated)
6.959
GRAVY (calculated)
-0.165
Length
749 amino acids
Sequence
(BLAST)
(BLAST)
001: MSGHGKQQPL LRHPAAAAGG TGRRRFLAFL AIAAALVASH HLLHAPAPSS RYHALFLTLG SNASAAAHLR ALTLRPHVAG TPANALAAEY VRAALASLSF
101: PTRVTPYSVL LSYPVHRSLS LSAGPGRATK SFSLTQDTYP NDPYADAAAE VIPTYFAYSG SGSVAAEVVY ANYGDRKDYA YLASRGVDVA GKVVLARYGD
201: IHCEDMVRNA RDAGAAAAII YTDAKDFGGP GAKGKRKYFP KARWLPPSGV QVGTLYYGNG DPTTPMWPSC AAGEDCERLT MEEVEGSEAM PGIPALPVSG
301: RDGETIQKAM GGGVAPPEWQ GGEGAPVYRI GPGPAVLNLT YIGNDTLATI ENVFAVIQGK EEPDRYVIIG NHRDAWTFGA VDPNSGTAAM LEIAERLSKL
401: EKKGWRPRRT IIVCSWDAEE FALTGSTEWV EDNMDMLASR AVAYLNVDIS VFGPGGLMPR ATPQLDELIK EASRMVPDPD DPSHTLYDYM IRQNPPIARV
501: AGAGTDFAAF VQHIGVPSLD MSYGLCSINV TPLASALNIV VLAVSEYPVY HSLYDDFVWM ERFGDPLFHR HVALASVWGL IALRLADDEI IPFNYVSYAS
601: ELEESSKVVE EGCRGCAVSF TPLHKSIKQL EKAATKIHMD KKVLQAQKWG QNTRERTLKV REINDRLMMA ERAFTNREGL AGRPWYKHMI YASSDQDDWG
701: TKAFPGIVSA IANAQKLNTS ESWRLLQHEI YRGARAVSKA SAVLDGRLT
101: PTRVTPYSVL LSYPVHRSLS LSAGPGRATK SFSLTQDTYP NDPYADAAAE VIPTYFAYSG SGSVAAEVVY ANYGDRKDYA YLASRGVDVA GKVVLARYGD
201: IHCEDMVRNA RDAGAAAAII YTDAKDFGGP GAKGKRKYFP KARWLPPSGV QVGTLYYGNG DPTTPMWPSC AAGEDCERLT MEEVEGSEAM PGIPALPVSG
301: RDGETIQKAM GGGVAPPEWQ GGEGAPVYRI GPGPAVLNLT YIGNDTLATI ENVFAVIQGK EEPDRYVIIG NHRDAWTFGA VDPNSGTAAM LEIAERLSKL
401: EKKGWRPRRT IIVCSWDAEE FALTGSTEWV EDNMDMLASR AVAYLNVDIS VFGPGGLMPR ATPQLDELIK EASRMVPDPD DPSHTLYDYM IRQNPPIARV
501: AGAGTDFAAF VQHIGVPSLD MSYGLCSINV TPLASALNIV VLAVSEYPVY HSLYDDFVWM ERFGDPLFHR HVALASVWGL IALRLADDEI IPFNYVSYAS
601: ELEESSKVVE EGCRGCAVSF TPLHKSIKQL EKAATKIHMD KKVLQAQKWG QNTRERTLKV REINDRLMMA ERAFTNREGL AGRPWYKHMI YASSDQDDWG
701: TKAFPGIVSA IANAQKLNTS ESWRLLQHEI YRGARAVSKA SAVLDGRLT
001: MSKSKSLAFV IAALSYSFFS LFSSPPKSHY HELFISTSFS DNASVALNLH TLTRRPHVAG TVANAEAAEY VRSVFTSSAL KSHVVAYQVS LTYPVHRSLV
101: LTPTDSAKPI TFLLEQEKLG DNPYANEVMP TFHGYAKSGN VSGPVVYANY GRVEDFVRLK KDMGVNVSGA VVIARYGQIY RGDIVKNAYE AGAVGVVIYT
201: DKRDYGGDEW FPASKWMPPS GVQVGTVYNG LGDPTTPGWA SVDGCERLSD EAVELSGDVP LIPSLPVSAA DAEVILKTVV GDVSDGDVYP VGPGPGVLNL
301: SYIGETVIAK IENVIGVIEG EEEPDRYVIL GNHRDAWTFG AVDPNSGTAV LMEIAQRLDK LQKRGWKPRR TIILCNWDAE EYGLIGSTEW VEENREMLSS
401: RAVAYLNVDC AVSGPGFHAS ATPQLDELIK VAAQEVRDPD NATQTIYESW IGSSDSVVIR RLGGGGSDYA SFVQHVGVPG VDMSFGRGYP VYHSMYDDFT
501: WMEKFGDPMF QRHVAMASVL GLVALRLADE EIIPFNYTSY ALELKKSAED LENEKLGHNI DVSTLIKSIE DLSTAAKHIS LEKEAIKGAL KVRELNDRLM
601: MAERALTDRD GLSERPWYKH LIYGPSKYDD YGSKSFPGVD DAIDNAKKLN TKASWENVQH QIWRVSRAIR HASLVLKGEL I
101: LTPTDSAKPI TFLLEQEKLG DNPYANEVMP TFHGYAKSGN VSGPVVYANY GRVEDFVRLK KDMGVNVSGA VVIARYGQIY RGDIVKNAYE AGAVGVVIYT
201: DKRDYGGDEW FPASKWMPPS GVQVGTVYNG LGDPTTPGWA SVDGCERLSD EAVELSGDVP LIPSLPVSAA DAEVILKTVV GDVSDGDVYP VGPGPGVLNL
301: SYIGETVIAK IENVIGVIEG EEEPDRYVIL GNHRDAWTFG AVDPNSGTAV LMEIAQRLDK LQKRGWKPRR TIILCNWDAE EYGLIGSTEW VEENREMLSS
401: RAVAYLNVDC AVSGPGFHAS ATPQLDELIK VAAQEVRDPD NATQTIYESW IGSSDSVVIR RLGGGGSDYA SFVQHVGVPG VDMSFGRGYP VYHSMYDDFT
501: WMEKFGDPMF QRHVAMASVL GLVALRLADE EIIPFNYTSY ALELKKSAED LENEKLGHNI DVSTLIKSIE DLSTAAKHIS LEKEAIKGAL KVRELNDRLM
601: MAERALTDRD GLSERPWYKH LIYGPSKYDD YGSKSFPGVD DAIDNAKKLN TKASWENVQH QIWRVSRAIR HASLVLKGEL I
Arabidopsis Description
LAMP1Probable glutamate carboxypeptidase LAMP1 [Source:UniProtKB/Swiss-Prot;Acc:Q7Y228]
SUBAcon: [vacuole]
SUBAcon: [vacuole]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.