Factsheet for HORVU3Hr1G070560.2

Subcellular Localization

min:

: max

Winner_takes_all: plastid

Predictor Summary:

plastid 4
mitochondrion 1
endoplasmic reticulum 1
plasma membrane 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
HORVU0Hr1G020850.2	Barley	plastid	69.84	64.25
HORVU0Hr1G020840.1	Barley	plastid	27.45	51.79
TraesCS3B01G311000.1	Wheat	plastid	94.57	47.74
TraesCS3A01G276800.2	Wheat	plastid	86.14	43.48
Os01t0740500-00	Rice	plastid	73.91	37.21
Zm00001d043519_P004	Maize	plastid	73.37	36.89
KXG33331	Sorghum	endoplasmic reticulum, plasma membrane, plastid	72.01	36.2
HORVU6Hr1G029960.1	Barley	mitochondrion	17.12	32.81
HORVU5Hr1G007810.6	Barley	endoplasmic reticulum, plasma membrane, plastid	26.09	31.79
HORVU3Hr1G104570.2	Barley	plastid	25.27	30.9
HORVU3Hr1G070550.5	Barley	mitochondrion	61.68	30.31
HORVU3Hr1G070790.1	Barley	peroxisome, plasma membrane	59.51	28.66
HORVU3Hr1G080240.1	Barley	plastid	23.37	28.57
GSMUA_Achr9P06030_001	Banana	endoplasmic reticulum	45.38	24.63
HORVU5Hr1G103870.2	Barley	mitochondrion	19.02	18.32
HORVU0Hr1G020860.1	Barley	cytosol	1.09	3.01
HORVU3Hr1G070540.14	Barley	cytosol, extracellular	1.63	1.59
HORVU5Hr1G103900.13	Barley	cytosol	0.54	0.5

Protein Annotations

EnsemblPlants:HORVU3Hr1G070560.2	EnsemblPlantsGene:HORVU3Hr1G070560	Gene3D:3.50.30.30	GO:GO:0005575	GO:GO:0016020	GO:GO:0016021
InterPro:PA_domain	PANTHER:PTHR10404	PANTHER:PTHR10404:SF45	PFAM:PF02225	SEG:seg	SUPFAM:SSF52025
SUPFAM:SSF53187	TMHMM:TMhelix	UniParc:UPI000B481E4C	UniProt:A0A287LJJ6	MapMan:19.4.5.7.3	:

Description

No Description!

Coordinates

chrchr3H:+:533394687..533396192

Molecular Weight (calculated)

38554.7 Da

IEP (calculated)

6.605

GRAVY (calculated)

0.020

Length

368 amino acids

Sequence
(BLAST)

001: MSRLDTASLL SPSPPPIKPR RRGRLLPSIL AVLAAAVSLF LLAVLRSPPT PSRNLGSLFL SLGSNNTAAF HLRALTLHPH VAGTKANSLT AAYVLHAFSS
101: LSIPAHITPY SVLLSYPVHR SLSLSAGPGR AAKPFSLTQD TYPNDPYAVA AAEVTPTFFA YSASGSVSAE AVYANYGREE DFAHLASRGV DVAGKVALAR
201: YGRIHCEDIV HNARAAGAAA ALVYPDPLEY GGPAGEGTFP NSRWLPPSGV QVGSLFRGVG DPTTPMWASS EGCERVSVED AMATDDMPGI PALPVSARDA
301: AEIQRVLGGA EAPAGWQGRD GSPVYRLGPG PAVLNLTYQG NDTMATIENV FAVIQGAEEP DRYDILAS

Best Arabidopsis Sequence Match ( AT3G54720.1 )
(BLAST)

001: MSQPLTTRPT VTGISIIPFR QPPPLCSFLF VIVLFVATFY TLHHPDAVTP PLLFSRNAYN ALRLRRLFLS SASNATISSY LRELTRHPHL AGTKPSLDTL
101: HYVFNHFQSL GLETHVAEYE ALLSYPTHIS VTASFSNTTT LEFDLNDVPG DSPVVRPYHA YSPSGSAQGN VVFVNHGEER DYHALESIGV SVKGCVVLAR
201: KGENLGRGAI VKIAEAKGAL GVLIYAENDG GGFGGIERGT VMRGIGDPVS PGWPGVVGGE KLSLDDELVT RRFPKIPSLP LSLRNAEIIL ASLGGARAPL
301: EWRNSGRVGP GQRVGPGRMV INMTFQGEMK MKKINNVVVT IRGSEEADRY VILGNHRDAW TYGAVDPNSG TSALLDISRR FALLLKSGWR PRRTILLCSW
401: DAEEFGMIGS TEWIEENVLN LGASAVAYLN VDCAVQGSGF FAGATPQLDG LLVDVLKLVQ DPDAVGLTVE ETFKSQNNII QRLSRVDSDF SGFLHHAGIP
501: SIDMYYGADY PVYHTAFDSY DWMIHNADPL FHRHVAMAGI WGLLGILLAD EPLIPFDYIS YADQLQAHRD KLSKLLEGKV SVNPLSMAIQ EFSLVAKEAA
601: DEAKKLKGKS YSKNDVAAAA KRRELNDRLM LVERGFLDAE GIKGKEWFKH LVYGPAAEPE SKLGFFPGIA DAIAMNASEG IIEHEIWRVA RAIQRASKAL
701: KGGFT

Arabidopsis Description

AMP1Probable glutamate carboxypeptidase AMP1 [Source:UniProtKB/Swiss-Prot;Acc:Q9M1S8]
SUBAcon: [plastid]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.