Factsheet for HORVU3Hr1G080240.1

Subcellular Localization

min:

: max

Winner_takes_all: plastid

Predictor Summary:

plastid 3
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	plastid
Any Predictor:	mitochondrion, plastid
ChloroP:	plastid
iPSORT:	plastid
MultiLoc:	plastid
TargetP:	mitochondrion

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
HORVU3Hr1G104570.2	Barley	plastid	78.07	78.07
HORVU5Hr1G007810.6	Barley	endoplasmic reticulum, plasma membrane, plastid	77.08	76.82
HORVU6Hr1G029960.1	Barley	mitochondrion	45.51	71.35
VIT_11s0065g00570.t01	Wine grape	cytosol	14.95	36.0
TraesCS5B01G429500.1	Wheat	endoplasmic reticulum, plasma membrane, vacuole	68.11	28.79
TraesCS5D01G435600.1	Wheat	endoplasmic reticulum, plasma membrane, plastid	67.77	28.65
TraesCS5A01G427500.1	Wheat	endoplasmic reticulum, plasma membrane	66.78	28.23
CDX76132	Canola	plastid	17.94	27.14
EER93326	Sorghum	plasma membrane, vacuole	61.79	26.16
Zm00001d034383_P003	Maize	plasma membrane, plastid, vacuole	59.47	25.11
Os03t0790600-01	Rice	mitochondrion	60.47	23.58
HORVU3Hr1G070560.2	Barley	plastid	28.57	23.37
HORVU0Hr1G020850.2	Barley	plastid	26.58	20.0
Solyc11g045250.1.1	Tomato	plastid	32.56	16.7
GSMUA_Achr5P02690_001	Banana	mitochondrion	37.54	16.19
KRG96329	Soybean	plasma membrane	36.21	15.66
HORVU0Hr1G020840.1	Barley	plastid	9.97	15.38
Bra007091.1-P	Field mustard	plastid	35.55	15.18
KRH68064	Soybean	endoplasmic reticulum	34.88	15.13
HORVU5Hr1G103870.2	Barley	mitochondrion	18.94	14.92
AT3G54720.1	Thale cress	plastid	34.88	14.89
CDX73456	Canola	plastid	34.55	14.81
CDX78257	Canola	plastid	34.55	14.75
KRH32940	Soybean	plastid	33.22	14.39
Bra014794.1-P	Field mustard	plastid	31.23	13.45
VIT_00s0285g00060.t01	Wine grape	cytosol	16.28	12.93
HORVU3Hr1G070790.1	Barley	peroxisome, plasma membrane	32.56	12.83
HORVU3Hr1G070550.5	Barley	mitochondrion	30.56	12.28
KRH03146	Soybean	mitochondrion	1.99	6.06
CDX76133	Canola	cytosol	9.3	6.05
HORVU0Hr1G020860.1	Barley	cytosol	1.33	3.01
VIT_00s0352g00020.t01	Wine grape	mitochondrion	1.99	2.11
VIT_00s0319g00060.t01	Wine grape	endoplasmic reticulum, plasma membrane	1.99	1.97
VIT_08s0032g00670.t01	Wine grape	cytosol	2.33	1.7
KRH07659	Soybean	cytosol, extracellular, plastid	0.66	1.68
HORVU3Hr1G070540.14	Barley	cytosol, extracellular	1.99	1.59
VIT_00s0327g00020.t01	Wine grape	endoplasmic reticulum, plasma membrane	1.33	1.4
GSMUA_Achr4P31300_001	Banana	cytosol	1.66	1.29
HORVU5Hr1G103900.13	Barley	cytosol	1.0	0.75
Solyc11g045240.1.1	Tomato	cytosol	0.0	0.0

Protein Annotations

EnsemblPlants:HORVU3Hr1G080240.1	EnsemblPlantsGene:HORVU3Hr1G080240	Gene3D:3.50.30.30	ncoils:Coil	PANTHER:PTHR10404	PANTHER:PTHR10404:SF63
SEG:seg	SignalP:SignalP-noTM	SUPFAM:SSF52025	UniParc:UPI000B4720D3	UniProt:A0A287LVW7	MapMan:19.4.5.7.3

Description

No Description!

Coordinates

chrchr3H:+:587825936..587827071

Molecular Weight (calculated)

29217.3 Da

IEP (calculated)

12.067

GRAVY (calculated)

0.114

Length

301 amino acids

Sequence
(BLAST)

001: AAPLLVAFLA AAAAPPRARP PALRPAAPRL LARPPRPTAG ARSGADPAAL FLSLSPGANA SIAADLRALT AGLHLAGTPG AAGVAAHVHA RFRAAGLRTL
101: TREYAPLLSY RAHASLALLA ANRSLLARLS TDKPADPDRR VVRPYHAYSP SGAAXXXXXX XXXXXXEDLA ALDRLGMSVR GRVAVAVRGG GYRDGVVARA
201: AGKGAVAVLI PGHADGGVER GAVLLGGPGD PLTPGWAVAD GAERLGFDHE AVRRRFPTIP SMPVSADTAV AIVRSLGGLA LPRAGRPSAR SPYAASRIAT
301: G

Best Arabidopsis Sequence Match ( AT3G54720.1 )
(BLAST)

001: MSQPLTTRPT VTGISIIPFR QPPPLCSFLF VIVLFVATFY TLHHPDAVTP PLLFSRNAYN ALRLRRLFLS SASNATISSY LRELTRHPHL AGTKPSLDTL
101: HYVFNHFQSL GLETHVAEYE ALLSYPTHIS VTASFSNTTT LEFDLNDVPG DSPVVRPYHA YSPSGSAQGN VVFVNHGEER DYHALESIGV SVKGCVVLAR
201: KGENLGRGAI VKIAEAKGAL GVLIYAENDG GGFGGIERGT VMRGIGDPVS PGWPGVVGGE KLSLDDELVT RRFPKIPSLP LSLRNAEIIL ASLGGARAPL
301: EWRNSGRVGP GQRVGPGRMV INMTFQGEMK MKKINNVVVT IRGSEEADRY VILGNHRDAW TYGAVDPNSG TSALLDISRR FALLLKSGWR PRRTILLCSW
401: DAEEFGMIGS TEWIEENVLN LGASAVAYLN VDCAVQGSGF FAGATPQLDG LLVDVLKLVQ DPDAVGLTVE ETFKSQNNII QRLSRVDSDF SGFLHHAGIP
501: SIDMYYGADY PVYHTAFDSY DWMIHNADPL FHRHVAMAGI WGLLGILLAD EPLIPFDYIS YADQLQAHRD KLSKLLEGKV SVNPLSMAIQ EFSLVAKEAA
601: DEAKKLKGKS YSKNDVAAAA KRRELNDRLM LVERGFLDAE GIKGKEWFKH LVYGPAAEPE SKLGFFPGIA DAIAMNASEG IIEHEIWRVA RAIQRASKAL
701: KGGFT

Arabidopsis Description

AMP1Probable glutamate carboxypeptidase AMP1 [Source:UniProtKB/Swiss-Prot;Acc:Q9M1S8]
SUBAcon: [plastid]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.