Factsheet for VIT_11s0065g00570.t01

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 2
golgi 1
cytosol 3
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, golgi, mitochondrion, nucleus
BaCelLo:	nucleus
EpiLoc:	golgi
MultiLoc:	cytosol
Plant-mPloc:	nucleus
PProwler:	mitochondrion
WoLF PSORT:	cytosol
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
VIT_00s0285g00060.t01	Wine grape	cytosol	77.6	25.59
HORVU6Hr1G029960.1	Barley	mitochondrion	27.2	17.71
HORVU3Hr1G080240.1	Barley	plastid	36.0	14.95
HORVU3Hr1G104570.2	Barley	plastid	34.4	14.29
HORVU5Hr1G007810.6	Barley	endoplasmic reticulum, plasma membrane, plastid	34.4	14.24
Solyc11g045250.1.1	Tomato	plastid	53.6	11.41
KRH68064	Soybean	endoplasmic reticulum	56.0	10.09
KRG96329	Soybean	plasma membrane	55.2	9.91
EER93326	Sorghum	plasma membrane, vacuole	50.4	8.86
KRH32940	Soybean	plastid	48.0	8.63
TraesCS5D01G435600.1	Wheat	endoplasmic reticulum, plasma membrane, plastid	48.0	8.43
CDX76133	Canola	cytosol	31.2	8.42
Zm00001d034383_P003	Maize	plasma membrane, plastid, vacuole	48.0	8.42
TraesCS5B01G429500.1	Wheat	endoplasmic reticulum, plasma membrane, vacuole	47.2	8.29
TraesCS5A01G427500.1	Wheat	endoplasmic reticulum, plasma membrane	46.4	8.15
Bra007091.1-P	Field mustard	plastid	45.6	8.09
CDX73456	Canola	plastid	44.8	7.98
CDX78257	Canola	plastid	43.2	7.66
AT3G54720.1	Thale cress	plastid	42.4	7.52
Os03t0790600-01	Rice	mitochondrion	46.4	7.51
Bra014794.1-P	Field mustard	plastid	40.8	7.3
VIT_11s0016g03010.t01	Wine grape	cytosol	31.2	5.06
KRH03146	Soybean	mitochondrion	3.2	4.04
GSMUA_Achr5P02690_001	Banana	mitochondrion	20.0	3.58
KRH07659	Soybean	cytosol, extracellular, plastid	1.6	1.68
VIT_00s0319g00060.t01	Wine grape	endoplasmic reticulum, plasma membrane	4.0	1.64
VIT_00s0352g00020.t01	Wine grape	mitochondrion	2.4	1.05
VIT_00s0327g00020.t01	Wine grape	endoplasmic reticulum, plasma membrane	2.4	1.05
CDX76132	Canola	plastid	0.8	0.5
VIT_08s0032g00670.t01	Wine grape	cytosol	1.6	0.49
HORVU5Hr1G103900.13	Barley	cytosol	0.8	0.25
GSMUA_Achr4P31300_001	Banana	cytosol	0.0	0.0
Solyc11g045240.1.1	Tomato	cytosol	0.0	0.0

Protein Annotations

ArrayExpress:VIT_11s0065g00570	EMBL:FN595502	EnsemblPlants:VIT_11s0065g00570.t01	EnsemblPlantsGene:VIT_11s0065g00570	Gene3D:3.50.30.30	PANTHER:PTHR10404
PANTHER:PTHR10404:SF63	ProteinID:CCB48928	ProteinID:CCB48928.1	SEG:seg	SUPFAM:SSF52025	UniParc:UPI000210843A
UniProt:F6H9K7	MapMan:19.4.5.7.3	:	:	:	:

Description

No Description!

Coordinates

chr11:+:14449169..14449546

Molecular Weight (calculated)

13495.2 Da

IEP (calculated)

4.486

GRAVY (calculated)

-0.260

Length

125 amino acids

Sequence
(BLAST)

001: MVRMGEESRE GVVGRAAEEG AVAVLMYTKG ESMSGVERET VMKGLGDPLT PGWGGVEGGE ALDLEDSQIL NRFPKIPSMP ISLEVAYSIL RSLEGPQMPH
101: HWRGDALGPQ PGRVELGPTL LNFTY

Best Arabidopsis Sequence Match ( AT3G54720.1 )
(BLAST)

001: MSQPLTTRPT VTGISIIPFR QPPPLCSFLF VIVLFVATFY TLHHPDAVTP PLLFSRNAYN ALRLRRLFLS SASNATISSY LRELTRHPHL AGTKPSLDTL
101: HYVFNHFQSL GLETHVAEYE ALLSYPTHIS VTASFSNTTT LEFDLNDVPG DSPVVRPYHA YSPSGSAQGN VVFVNHGEER DYHALESIGV SVKGCVVLAR
201: KGENLGRGAI VKIAEAKGAL GVLIYAENDG GGFGGIERGT VMRGIGDPVS PGWPGVVGGE KLSLDDELVT RRFPKIPSLP LSLRNAEIIL ASLGGARAPL
301: EWRNSGRVGP GQRVGPGRMV INMTFQGEMK MKKINNVVVT IRGSEEADRY VILGNHRDAW TYGAVDPNSG TSALLDISRR FALLLKSGWR PRRTILLCSW
401: DAEEFGMIGS TEWIEENVLN LGASAVAYLN VDCAVQGSGF FAGATPQLDG LLVDVLKLVQ DPDAVGLTVE ETFKSQNNII QRLSRVDSDF SGFLHHAGIP
501: SIDMYYGADY PVYHTAFDSY DWMIHNADPL FHRHVAMAGI WGLLGILLAD EPLIPFDYIS YADQLQAHRD KLSKLLEGKV SVNPLSMAIQ EFSLVAKEAA
601: DEAKKLKGKS YSKNDVAAAA KRRELNDRLM LVERGFLDAE GIKGKEWFKH LVYGPAAEPE SKLGFFPGIA DAIAMNASEG IIEHEIWRVA RAIQRASKAL
701: KGGFT

Arabidopsis Description

AMP1Probable glutamate carboxypeptidase AMP1 [Source:UniProtKB/Swiss-Prot;Acc:Q9M1S8]
SUBAcon: [plastid]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.