Factsheet for Zm00001d034383_P003

Subcellular Localization

min:

: max

Winner_takes_all: plasma membrane, plastid, vacuole

Predictor Summary:

plastid 2
extracellular 2
endoplasmic reticulum 2
vacuole 3
plasma membrane 3
golgi 2
mitochondrion 2

Predictors

GFP

MS/MS

Papers

Winner Takes All:	plasma membrane, plastid, vacuole
Any Predictor:	mitochondrion, plastid, secretory
ChloroP:	plastid
iPSORT:	secretory
MultiLoc:	vacuole
Predotar:	secretory
PProwler:	mitochondrion
TargetP:	mitochondrion
WoLF PSORT:	plastid
YLoc:	plasma membrane

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
EER93326	Sorghum	plasma membrane, vacuole	89.34	89.59
TraesCS5D01G435600.1	Wheat	endoplasmic reticulum, plasma membrane, plastid	73.07	73.17
TraesCS5B01G429500.1	Wheat	endoplasmic reticulum, plasma membrane, vacuole	72.93	73.03
TraesCS5A01G427500.1	Wheat	endoplasmic reticulum, plasma membrane	72.51	72.61
HORVU5Hr1G103900.13	Barley	cytosol	38.99	69.5
Os03t0790600-01	Rice	mitochondrion	72.23	66.71
HORVU6Hr1G029960.1	Barley	mitochondrion	17.67	65.62
KRH03146	Soybean	mitochondrion	8.84	63.64
HORVU5Hr1G007810.6	Barley	endoplasmic reticulum, plasma membrane, plastid	26.93	63.58
GSMUA_Achr4P31300_001	Banana	cytosol	33.94	62.21
HORVU3Hr1G104570.2	Barley	plastid	25.81	61.13
HORVU3Hr1G080240.1	Barley	plastid	25.11	59.47
VIT_00s0285g00060.t01	Wine grape	cytosol	30.29	56.99
VIT_08s0032g00670.t01	Wine grape	cytosol	32.54	56.31
KRH07659	Soybean	cytosol, extracellular, plastid	9.4	56.3
VIT_00s0352g00020.t01	Wine grape	mitochondrion	21.88	54.74
VIT_00s0327g00020.t01	Wine grape	endoplasmic reticulum, plasma membrane	21.74	54.2
GSMUA_Achr5P02690_001	Banana	mitochondrion	53.02	54.15
CDX76133	Canola	cytosol	34.92	53.78
VIT_00s0319g00060.t01	Wine grape	endoplasmic reticulum, plasma membrane	22.16	51.97
KRH32940	Soybean	plastid	50.35	51.65
KRG96329	Soybean	plasma membrane	49.79	51.01
Solyc11g045240.1.1	Tomato	cytosol	5.75	50.62
KRH68064	Soybean	endoplasmic reticulum	49.09	50.43
Solyc11g045250.1.1	Tomato	plastid	40.53	49.23
Bra007091.1-P	Field mustard	plastid	48.25	48.79
VIT_11s0065g00570.t01	Wine grape	cytosol	8.42	48.0
AT3G54720.1	Thale cress	plastid	47.27	47.8
CDX73456	Canola	plastid	46.7	47.44
CDX78257	Canola	plastid	46.84	47.38
Bra014794.1-P	Field mustard	plastid	46.42	47.35
Zm00001d012765_P005	Maize	extracellular	40.11	39.45
Zm00001d043519_P004	Maize	plastid	38.57	37.57
Zm00001d043517_P002	Maize	mitochondrion	38.29	36.74
CDX76132	Canola	plastid	9.12	32.66

Protein Annotations

Gene3D:1.20.930.40	EntrezGene:100147738	MapMan:19.4.5.7.3	Gene3D:3.40.630.10	Gene3D:3.50.30.30	UniProt:A0A1D6L709
UniProt:A0A1R3MNF4	ncoils:Coil	EMBL:EU401893	GO:GO:0000003	GO:GO:0003674	GO:GO:0003824
GO:GO:0004181	GO:GO:0005488	GO:GO:0005575	GO:GO:0005623	GO:GO:0005886	GO:GO:0006508
GO:GO:0007275	GO:GO:0008150	GO:GO:0008152	GO:GO:0008233	GO:GO:0008237	GO:GO:0009628
GO:GO:0009640	GO:GO:0009653	GO:GO:0009790	GO:GO:0009791	GO:GO:0009793	GO:GO:0009908
GO:GO:0010074	GO:GO:0010080	GO:GO:0010081	GO:GO:0010082	GO:GO:0010305	GO:GO:0016020
GO:GO:0016021	GO:GO:0016787	GO:GO:0019538	GO:GO:0040007	GO:GO:0040008	GO:GO:0046872
GO:GO:0048364	GO:GO:0048507	GO:GO:2000034	InterPro:IPR036757	MEROPS:M28.007	ProteinID:ONM10079.1
PFAM:PF04253	PFAM:PF04389	PANTHER:PTHR10404	PANTHER:PTHR10404:SF63	InterPro:Peptidase_M28	SUPFAM:SSF47672
SUPFAM:SSF52025	SUPFAM:SSF53187	InterPro:TFR-like_dimer_dom	InterPro:TFR-like_dimer_dom_sf	TMHMM:TMhelix	UniParc:UPI000220E1EF
EnsemblPlantsGene:Zm00001d034383	EnsemblPlants:Zm00001d034383_P003	EnsemblPlants:Zm00001d034383_T003	SEG:seg	:	:

Description

viviparous8Putative membrane localized peptidase

Coordinates

chr1:+:291472477..291480873

Molecular Weight (calculated)

77455.7 Da

IEP (calculated)

7.084

GRAVY (calculated)

-0.147

Length

713 amino acids

Sequence
(BLAST)

001: MPHSVLARLP PGSVRLVAAF GLLLLVSLLV LHRRPGRPHV AAAAASDRLT DPSRSRLFLS QSPGANASIA ADLRALTAGP HLAGTPASAG AAAHVLARLR
101: AAGLQTLTRE YEPLLSYPGH ASLALLRPDG SLLARLSLEE PADEGRRVVP PYHAYAPSGG AVAEAVFVNL GREEDYVVLE RLGVGVRGRV AVARRGGGYR
201: GGVVARAADK GAVAVLIAGN ADGGVERGVV LLGGPGDPLT PGWAATSGAE RLKFDDKAVK QRFPSIPSMP VSAKTAAAII RSLGGPAIPA EWKDGLGVDT
301: GGLGPGPTLV NFTYQEDRKF YKIRDIFGII KGQEEPDRYV ILGNHRDAWT YGAVDPNSGT AALLDIARRL GIMLQSGWKP RRSIILCSWD GEEFGMIGST
401: EWVEDNLEDL HSKAVAYLNV DCAVQGVGFF AGSTPQLDKL LVDITRQVRD PDVTGKMVHD TWNEMSGGIK IERLARTDSD FAPFLHHAGI PSVDLYYGEE
501: FPGYHTALDT YNWMEKHGDP FFLRHLAITE IWGLLALRLA NDPVLPFDYQ AYTSQLQEHI KTLSALTSNG HAVNLMNGCV NDLSGAAMEV LKEMKKLQQM
601: DLYDEHARMR RRLLNDRLLL AERSFLQPEG LQGRGWFKHL LYSPPEDYES KLSFFPGIAD AISRSANLSD KEQEVAMQHE VWKVCRAIQR AASVLRGEFS
701: EQKPTNFSSL VTP

Best Arabidopsis Sequence Match ( AT3G54720.1 )
(BLAST)

001: MSQPLTTRPT VTGISIIPFR QPPPLCSFLF VIVLFVATFY TLHHPDAVTP PLLFSRNAYN ALRLRRLFLS SASNATISSY LRELTRHPHL AGTKPSLDTL
101: HYVFNHFQSL GLETHVAEYE ALLSYPTHIS VTASFSNTTT LEFDLNDVPG DSPVVRPYHA YSPSGSAQGN VVFVNHGEER DYHALESIGV SVKGCVVLAR
201: KGENLGRGAI VKIAEAKGAL GVLIYAENDG GGFGGIERGT VMRGIGDPVS PGWPGVVGGE KLSLDDELVT RRFPKIPSLP LSLRNAEIIL ASLGGARAPL
301: EWRNSGRVGP GQRVGPGRMV INMTFQGEMK MKKINNVVVT IRGSEEADRY VILGNHRDAW TYGAVDPNSG TSALLDISRR FALLLKSGWR PRRTILLCSW
401: DAEEFGMIGS TEWIEENVLN LGASAVAYLN VDCAVQGSGF FAGATPQLDG LLVDVLKLVQ DPDAVGLTVE ETFKSQNNII QRLSRVDSDF SGFLHHAGIP
501: SIDMYYGADY PVYHTAFDSY DWMIHNADPL FHRHVAMAGI WGLLGILLAD EPLIPFDYIS YADQLQAHRD KLSKLLEGKV SVNPLSMAIQ EFSLVAKEAA
601: DEAKKLKGKS YSKNDVAAAA KRRELNDRLM LVERGFLDAE GIKGKEWFKH LVYGPAAEPE SKLGFFPGIA DAIAMNASEG IIEHEIWRVA RAIQRASKAL
701: KGGFT

Arabidopsis Description

AMP1Probable glutamate carboxypeptidase AMP1 [Source:UniProtKB/Swiss-Prot;Acc:Q9M1S8]
SUBAcon: [plastid]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.