CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: plastid

Predictor Summary:

plastid 4
extracellular 3
endoplasmic reticulum 4
vacuole 3
plasma membrane 4
golgi 3

Predictors

GFP

MS/MS

Papers

Winner Takes All:	plastid
Any Predictor:	plastid, secretory
BaCelLo:	plastid
ChloroP:	plastid
iPSORT:	secretory
MultiLoc:	endoplasmic reticulum
Predotar:	plastid
PProwler:	secretory
TargetP:	secretory
WoLF PSORT:	plastid
YLoc:	plasma membrane

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
KRH68064	Soybean	endoplasmic reticulum	71.22	71.33
KRG96329	Soybean	plasma membrane	70.65	70.55
KRH03146	Soybean	mitochondrion	9.93	69.7
VIT_08s0032g00670.t01	Wine grape	cytosol	40.14	67.72
VIT_00s0352g00020.t01	Wine grape	mitochondrion	26.76	65.26
VIT_00s0327g00020.t01	Wine grape	endoplasmic reticulum, plasma membrane	26.76	65.03
KRH07659	Soybean	cytosol, extracellular, plastid	10.94	63.87
VIT_00s0285g00060.t01	Wine grape	cytosol	34.82	63.85
VIT_00s0319g00060.t01	Wine grape	endoplasmic reticulum, plasma membrane	26.76	61.18
GSMUA_Achr4P31300_001	Banana	cytosol	34.1	60.93
CDX76133	Canola	cytosol	40.43	60.69
Solyc11g045250.1.1	Tomato	plastid	48.92	57.92
Solyc11g045240.1.1	Tomato	cytosol	6.62	56.79
HORVU5Hr1G103900.13	Barley	cytosol	32.52	56.5
Bra007091.1-P	Field mustard	plastid	56.98	56.17
AT3G54720.1	Thale cress	plastid	56.83	56.03
CDX78257	Canola	plastid	56.4	55.6
CDX73456	Canola	plastid	55.54	54.99
Bra014794.1-P	Field mustard	plastid	55.25	54.94
TraesCS5D01G435600.1	Wheat	endoplasmic reticulum, plasma membrane, plastid	52.52	51.26
EER93326	Sorghum	plasma membrane, vacuole	52.09	50.91
TraesCS5A01G427500.1	Wheat	endoplasmic reticulum, plasma membrane	51.8	50.56
TraesCS5B01G429500.1	Wheat	endoplasmic reticulum, plasma membrane, vacuole	51.65	50.42
Zm00001d034383_P003	Maize	plasma membrane, plastid, vacuole	51.65	50.35
GSMUA_Achr5P02690_001	Banana	mitochondrion	48.92	48.71
VIT_11s0065g00570.t01	Wine grape	cytosol	8.63	48.0
Os03t0790600-01	Rice	mitochondrion	52.52	47.28
CDX76132	Canola	plastid	12.81	44.72
KRH74227	Soybean	cytosol	12.52	42.23
KRH74232	Soybean	endoplasmic reticulum, plastid	29.78	41.32
HORVU6Hr1G029960.1	Barley	mitochondrion	11.22	40.62
HORVU5Hr1G007810.6	Barley	endoplasmic reticulum, plasma membrane, plastid	15.97	36.76
HORVU3Hr1G104570.2	Barley	plastid	15.54	35.88
HORVU3Hr1G080240.1	Barley	plastid	14.39	33.22

Protein Annotations

Gene3D:1.20.930.40	EntrezGene:100817485	MapMan:19.4.5.7.3	Gene3D:3.40.630.10	Gene3D:3.50.30.30	UniProt:A0A0R0HR10
EMBL:ACUP02006205	EnsemblPlantsGene:GLYMA_10G088000	GO:GO:0005575	GO:GO:0016020	GO:GO:0016021	InterPro:IPR036757
EnsemblPlants:KRH32940	ProteinID:KRH32940	ProteinID:KRH32940.1	MEROPS:M28.007	PFAM:PF04253	PFAM:PF04389
PANTHER:PTHR10404	PANTHER:PTHR10404:SF63	InterPro:Peptidase_M28	SUPFAM:SSF47672	SUPFAM:SSF52025	SUPFAM:SSF53187
InterPro:TFR-like_dimer_dom	InterPro:TFR-like_dimer_dom_sf	TMHMM:TMhelix	UniParc:UPI000233D3DA	SEG:seg	:

Description

hypothetical protein

Coordinates

chr10:+:11454208..11460666

Molecular Weight (calculated)

76130.2 Da

IEP (calculated)

6.050

GRAVY (calculated)

-0.145

Length

695 amino acids

Sequence
(BLAST)

001: MVPSNTVTAF TAKPSPLLTF VMLIVLGVVG FYSLHFPPRP TTSPDPSRFR HVFVSSSSNS TVASYLRALT VHPHLSGTKP ASLTARYVVN HFTTLGFQTK
101: TVQHSALLSY PVRSSLAAHF SDGTSFEFQL TEPDTEKEVV APYHAYSPSG AAEAAAVFVN YGREEDYRQL VAAGVEVAGC VVVARGGALP RGAVVEAAER
201: HGAAAAAVFV ERDTWREGFE RGHVMRGGIG DPLSPGWSGV EGGESLGLED SEVLKRFPKI PSLPLSAEAA ERILESLGGA PLPLDWRGTL KSSKVKNVGP
301: GPTILNFTYQ GELKVATIEN VFAIIKGREE PDRYVLLGNH RDAWTYGAVD PNSGTAALLD IAGRFSILLR LGWTPRRTII LCSWDAEEFG MIGSTEWVEQ
401: NLVNLRSKAV AYLNVDCAVQ GPGFFAGSTP QLDDLLVEVI KQVKDPDTEG TTIYENWAAA GGNSNIQRLS GVDSDFAPFV QHAGVPSVDV YYGKDYPVYH
501: TAFDSYNWMT KFGDPFFQRH EAVTGIWGLL ALRLADDSII PFNYLSYANQ LQVYNNILSN LLDKQITLHP LNTSIQEFAS AAKEANDESK KLKWQEASDR
601: SIDMKMRALN DRLMLAERGF LDVDGLQGRQ WFKHLVFGPP SDHESKLDFF PGIADSLSGM DKMSEKERLA AIQHEIWRVA RAIQRAASAL RGDLA

Best Arabidopsis Sequence Match ( AT3G54720.1 )
(BLAST)

001: MSQPLTTRPT VTGISIIPFR QPPPLCSFLF VIVLFVATFY TLHHPDAVTP PLLFSRNAYN ALRLRRLFLS SASNATISSY LRELTRHPHL AGTKPSLDTL
101: HYVFNHFQSL GLETHVAEYE ALLSYPTHIS VTASFSNTTT LEFDLNDVPG DSPVVRPYHA YSPSGSAQGN VVFVNHGEER DYHALESIGV SVKGCVVLAR
201: KGENLGRGAI VKIAEAKGAL GVLIYAENDG GGFGGIERGT VMRGIGDPVS PGWPGVVGGE KLSLDDELVT RRFPKIPSLP LSLRNAEIIL ASLGGARAPL
301: EWRNSGRVGP GQRVGPGRMV INMTFQGEMK MKKINNVVVT IRGSEEADRY VILGNHRDAW TYGAVDPNSG TSALLDISRR FALLLKSGWR PRRTILLCSW
401: DAEEFGMIGS TEWIEENVLN LGASAVAYLN VDCAVQGSGF FAGATPQLDG LLVDVLKLVQ DPDAVGLTVE ETFKSQNNII QRLSRVDSDF SGFLHHAGIP
501: SIDMYYGADY PVYHTAFDSY DWMIHNADPL FHRHVAMAGI WGLLGILLAD EPLIPFDYIS YADQLQAHRD KLSKLLEGKV SVNPLSMAIQ EFSLVAKEAA
601: DEAKKLKGKS YSKNDVAAAA KRRELNDRLM LVERGFLDAE GIKGKEWFKH LVYGPAAEPE SKLGFFPGIA DAIAMNASEG IIEHEIWRVA RAIQRASKAL
701: KGGFT

Arabidopsis Description

AMP1Probable glutamate carboxypeptidase AMP1 [Source:UniProtKB/Swiss-Prot;Acc:Q9M1S8]
SUBAcon: [plastid]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.