CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: plasma membrane

Predictor Summary:

plastid 2
vacuole 4
extracellular 4
endoplasmic reticulum 4
plasma membrane 5
golgi 3
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	plasma membrane
Any Predictor:	mitochondrion, plastid, secretory
BaCelLo:	plastid
ChloroP:	plastid
EpiLoc:	vacuole
iPSORT:	secretory
MultiLoc:	endoplasmic reticulum
Plant-mPloc:	extracellular
Predotar:	mitochondrion
PProwler:	secretory
TargetP:	secretory
WoLF PSORT:	plasma membrane
YLoc:	plasma membrane

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
KRH68064	Soybean	endoplasmic reticulum	86.78	87.03
KRH03146	Soybean	mitochondrion	11.21	78.79
KRH07659	Soybean	cytosol, extracellular, plastid	12.21	71.43
KRH32940	Soybean	plastid	70.55	70.65
VIT_08s0032g00670.t01	Wine grape	cytosol	40.09	67.72
VIT_00s0327g00020.t01	Wine grape	endoplasmic reticulum, plasma membrane	27.44	66.78
VIT_00s0285g00060.t01	Wine grape	cytosol	36.35	66.75
VIT_00s0352g00020.t01	Wine grape	mitochondrion	27.16	66.32
VIT_00s0319g00060.t01	Wine grape	endoplasmic reticulum, plasma membrane	27.3	62.5
GSMUA_Achr4P31300_001	Banana	cytosol	34.05	60.93
Solyc11g045250.1.1	Tomato	plastid	50.86	60.31
CDX76133	Canola	cytosol	39.66	59.61
Solyc11g045240.1.1	Tomato	cytosol	6.61	56.79
Bra007091.1-P	Field mustard	plastid	56.03	55.32
CDX73456	Canola	plastid	55.75	55.27
VIT_11s0065g00570.t01	Wine grape	cytosol	9.91	55.2
CDX78257	Canola	plastid	55.6	54.89
AT3G54720.1	Thale cress	plastid	55.32	54.61
Bra014794.1-P	Field mustard	plastid	54.02	53.79
HORVU5Hr1G103900.13	Barley	cytosol	29.89	52.0
EER93326	Sorghum	plasma membrane, vacuole	51.15	50.07
Zm00001d034383_P003	Maize	plasma membrane, plastid, vacuole	51.01	49.79
TraesCS5A01G427500.1	Wheat	endoplasmic reticulum, plasma membrane	50.86	49.72
TraesCS5B01G429500.1	Wheat	endoplasmic reticulum, plasma membrane, vacuole	50.57	49.44
TraesCS5D01G435600.1	Wheat	endoplasmic reticulum, plasma membrane, plastid	50.57	49.44
GSMUA_Achr5P02690_001	Banana	mitochondrion	47.99	47.85
Os03t0790600-01	Rice	mitochondrion	51.15	46.11
KRH74232	Soybean	endoplasmic reticulum, plastid	30.17	41.92
CDX76132	Canola	plastid	11.64	40.7
KRH74227	Soybean	cytosol	11.93	40.29
HORVU6Hr1G029960.1	Barley	mitochondrion	11.06	40.1
HORVU5Hr1G007810.6	Barley	endoplasmic reticulum, plasma membrane, plastid	17.24	39.74
HORVU3Hr1G104570.2	Barley	plastid	15.95	36.88
HORVU3Hr1G080240.1	Barley	plastid	15.66	36.21

Protein Annotations

Gene3D:1.20.930.40	EntrezGene:100798131	MapMan:19.4.5.7.3	Gene3D:3.40.630.10	Gene3D:3.50.30.30	EMBL:ACUP02012151
ncoils:Coil	EnsemblPlantsGene:GLYMA_19G203400	GO:GO:0005575	GO:GO:0016020	GO:GO:0016021	UniProt:I1NAY2
InterPro:IPR036757	EnsemblPlants:KRG96329	ProteinID:KRG96329	ProteinID:KRG96329.1	MEROPS:M28.007	InterPro:PA_domain
PFAM:PF02225	PFAM:PF04253	PFAM:PF04389	PANTHER:PTHR10404	PANTHER:PTHR10404:SF63	InterPro:Peptidase_M28
SUPFAM:SSF47672	SUPFAM:SSF52025	SUPFAM:SSF53187	InterPro:TFR-like_dimer_dom	InterPro:TFR-like_dimer_dom_sf	TMHMM:TMhelix
UniParc:UPI00023DDFE7	SEG:seg	:	:	:	:

Description

hypothetical protein

Coordinates

chr19:+:45998791..46004470

Molecular Weight (calculated)

75819.7 Da

IEP (calculated)

7.565

GRAVY (calculated)

-0.068

Length

696 amino acids

Sequence
(BLAST)

001: MMPKPMNVLT TKPSPLSTMV VLLILCILGF YALHLPHSST PSFTSKSLSQ LEKLFLSTSS NSTISSYLRA LTLHPHLAGT KPASDTTRHV LNHFTSLGLQ
101: AHTTTYTTLL SFPVRSSLSA HFSDGASVSL RLTEASGPGV VAAYHAYSPS GKVHARAVFA NYGRERDYLA LAAMGVNVSG CVVVVRKGGR MGRGAVVERA
201: EANGAAAVLV YGEGDTWRKG FERGHVMRGG IGDPLTPGWA GVEGGETLGL EDGEVLKRFP KIPSMPLSAE VADIILSSLG GVPLPLQWRG TLKSMVRNVG
301: PGPTILNFTY QGEKKVATIQ NVFAVIKGSE EPDRYVLLGN HRDAWTYGAV DPSSGTAALL DIARRFSALL GLGWKPRRTI ILCSWDAEEF GMIGSTEWVE
401: QNLINLGSKA VAYLNVDCAV QGPGFFVGST PQLDSLILEV TKKVKDPDSE GVSLYENWAA AAGGGNNIQR LSGVDSDFAP FVQHAGVPSI DMYYGRDFPV
501: YHTAFDSYNW MAEYGDPFFH RHVAVTGVWG LLALHLADDP VLPFNYVPYA NELQLYKNTL SNLIDQKISL HPLTLSIEEF ASAAKEANDE LKKLRLQESE
601: SCFVDMKKRA LNDRLMLAEK GFLDADGLQG RQWFKHLVFG PSSNHEKLNF FPGISDSITR LSGISERERL SSIQHEIWRV ARAIRRAASA LSGEFT

Best Arabidopsis Sequence Match ( AT3G54720.1 )
(BLAST)

001: MSQPLTTRPT VTGISIIPFR QPPPLCSFLF VIVLFVATFY TLHHPDAVTP PLLFSRNAYN ALRLRRLFLS SASNATISSY LRELTRHPHL AGTKPSLDTL
101: HYVFNHFQSL GLETHVAEYE ALLSYPTHIS VTASFSNTTT LEFDLNDVPG DSPVVRPYHA YSPSGSAQGN VVFVNHGEER DYHALESIGV SVKGCVVLAR
201: KGENLGRGAI VKIAEAKGAL GVLIYAENDG GGFGGIERGT VMRGIGDPVS PGWPGVVGGE KLSLDDELVT RRFPKIPSLP LSLRNAEIIL ASLGGARAPL
301: EWRNSGRVGP GQRVGPGRMV INMTFQGEMK MKKINNVVVT IRGSEEADRY VILGNHRDAW TYGAVDPNSG TSALLDISRR FALLLKSGWR PRRTILLCSW
401: DAEEFGMIGS TEWIEENVLN LGASAVAYLN VDCAVQGSGF FAGATPQLDG LLVDVLKLVQ DPDAVGLTVE ETFKSQNNII QRLSRVDSDF SGFLHHAGIP
501: SIDMYYGADY PVYHTAFDSY DWMIHNADPL FHRHVAMAGI WGLLGILLAD EPLIPFDYIS YADQLQAHRD KLSKLLEGKV SVNPLSMAIQ EFSLVAKEAA
601: DEAKKLKGKS YSKNDVAAAA KRRELNDRLM LVERGFLDAE GIKGKEWFKH LVYGPAAEPE SKLGFFPGIA DAIAMNASEG IIEHEIWRVA RAIQRASKAL
701: KGGFT

Arabidopsis Description

AMP1Probable glutamate carboxypeptidase AMP1 [Source:UniProtKB/Swiss-Prot;Acc:Q9M1S8]
SUBAcon: [plastid]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.