Factsheet for TraesCS5B01G429500.1

Subcellular Localization

min:

: max

Winner_takes_all: plasma membrane, endoplasmic reticulum, vacuole

Predictor Summary:

plastid 2
endoplasmic reticulum 3
extracellular 2
golgi 2
plasma membrane 3
vacuole 3
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	endoplasmic reticulum, plasma membrane, vacuole
Any Predictor:	mitochondrion, plastid, secretory
ChloroP:	plastid
iPSORT:	plastid
MultiLoc:	endoplasmic reticulum
Predotar:	secretory
PProwler:	secretory
TargetP:	mitochondrion
WoLF PSORT:	vacuole
YLoc:	plasma membrane

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS5D01G435600.1	Wheat	endoplasmic reticulum, plasma membrane, plastid	95.93	95.93
TraesCS5A01G427500.1	Wheat	endoplasmic reticulum, plasma membrane	94.52	94.52
HORVU5Hr1G103900.13	Barley	cytosol	47.89	85.25
HORVU6Hr1G029960.1	Barley	mitochondrion	21.21	78.65
EER93326	Sorghum	plasma membrane, vacuole	73.31	73.42
HORVU5Hr1G007810.6	Barley	endoplasmic reticulum, plasma membrane, plastid	31.04	73.18
Zm00001d034383_P003	Maize	plasma membrane, plastid, vacuole	73.03	72.93
HORVU3Hr1G104570.2	Barley	plastid	29.35	69.44
HORVU3Hr1G080240.1	Barley	plastid	28.79	68.11
Os03t0790600-01	Rice	mitochondrion	73.03	67.36
KRH03146	Soybean	mitochondrion	9.13	65.66
GSMUA_Achr4P31300_001	Banana	cytosol	33.43	61.18
VIT_00s0285g00060.t01	Wine grape	cytosol	31.04	58.31
VIT_00s0327g00020.t01	Wine grape	endoplasmic reticulum, plasma membrane	23.17	57.69
VIT_08s0032g00670.t01	Wine grape	cytosol	33.15	57.28
VIT_00s0352g00020.t01	Wine grape	mitochondrion	22.89	57.19
KRH07659	Soybean	cytosol, extracellular, plastid	9.41	56.3
VIT_00s0319g00060.t01	Wine grape	endoplasmic reticulum, plasma membrane	23.17	54.28
CDX76133	Canola	cytosol	35.25	54.21
GSMUA_Achr5P02690_001	Banana	mitochondrion	52.95	54.01
KRH32940	Soybean	plastid	50.42	51.65
Solyc11g045240.1.1	Tomato	cytosol	5.76	50.62
KRG96329	Soybean	plasma membrane	49.44	50.57
KRH68064	Soybean	endoplasmic reticulum	49.02	50.29
Solyc11g045250.1.1	Tomato	plastid	40.59	49.23
Bra007091.1-P	Field mustard	plastid	47.89	48.37
AT3G54720.1	Thale cress	plastid	46.91	47.38
CDX78257	Canola	plastid	46.77	47.23
Bra014794.1-P	Field mustard	plastid	46.35	47.21
VIT_11s0065g00570.t01	Wine grape	cytosol	8.29	47.2
CDX73456	Canola	plastid	46.35	47.01
TraesCS3B01G311000.1	Wheat	plastid	40.31	39.37
TraesCS3B01G309500.4	Wheat	cytosol, endoplasmic reticulum, plasma membrane	40.17	38.13
TraesCS3B01G310900.1	Wheat	cytosol	40.45	36.0
CDX76132	Canola	plastid	9.13	32.66

Protein Annotations

Gene3D:1.20.930.40	MapMan:19.4.5.7.3	Gene3D:3.40.630.10	Gene3D:3.50.30.30	ncoils:Coil	GO:GO:0000003
GO:GO:0003674	GO:GO:0003824	GO:GO:0004181	GO:GO:0006508	GO:GO:0007275	GO:GO:0008150
GO:GO:0008152	GO:GO:0009628	GO:GO:0009640	GO:GO:0009653	GO:GO:0009790	GO:GO:0009791
GO:GO:0009793	GO:GO:0009908	GO:GO:0010080	GO:GO:0010081	GO:GO:0010082	GO:GO:0010305
GO:GO:0016787	GO:GO:0019538	GO:GO:0040007	GO:GO:0048364	GO:GO:0048507	InterPro:IPR036757
PFAM:PF04253	PFAM:PF04389	PANTHER:PTHR10404	PANTHER:PTHR10404:SF63	InterPro:Peptidase_M28	SUPFAM:SSF47672
SUPFAM:SSF52025	SUPFAM:SSF53187	SignalP:SignalP-noTM	InterPro:TFR-like_dimer_dom	InterPro:TFR-like_dimer_dom_sf	EnsemblPlantsGene:TraesCS5B01G429500
EnsemblPlants:TraesCS5B01G429500.1	TIGR:cd08022	SEG:seg	:	:	:

Description

No Description!

Coordinates

chr5B:+:604997518..605004149

Molecular Weight (calculated)

76737.8 Da

IEP (calculated)

6.999

GRAVY (calculated)

-0.085

Length

712 amino acids

Sequence
(BLAST)

001: MPHPSSPSSS PQQLRLARLL LPFGLLLLVS LLVLHGRPPG TRPGQSGTDP AALFLSLSPG ANASIAADLR ALTSGPHLAG TAGAAGVAAH VLSRLRAAGL
101: RTLTREYAPL LSYRAHASLA LLAADRSLLA YLSTDEPADP GRRVVRPYHA YAPSGAAVAE AVFVNLGREE DLAALDRLGV SLRGRVAVAV RGGGYRGGVV
201: ARAAGRGAVA VLIAGRADGG VERGTVLLGG PGDPLTPGWA AADGAERLGF DHEAVRRRLP TIPSMPVSAD TASVIVRSLG GPALPQEWRA GLGLEGHAGG
301: VGPGPTLVNF TYQEDRKMAT IKDIFAVIKG HEEPDRYVIL GNHRDAWTYG AVDPNSGTAA LLDVARRLGI MLQSGWTPRR TIILCSWDAE EFGMIGSTEW
401: VEENLGDLQS KAVAYLNVDC AVQGMGLFAG STPQLDKLLI DVTRLVKDPD VEGKTVHDTW STMNGGINIE RLARTDSDFA PFLHHAGIPC VDLYYGKEFP
501: GYHTALDSYI WMEKHGDPLF LRHLAITEIW GLLALRLAND LVLPFDYHTY ASQLQEHTNV LADRMDNSQS VSVINGFIND LSSAATEVQK EAKELKMLDI
601: HDGRGLIRRR LLNDRLLLAE RSFLHAEGLQ GRTWYKHLMY SPPEDYESEL SFFPGIADAI SRQGNQSTRQ RQAAVRQELW RVAMAIERAA NVLRGEFGAQ
701: SKPVNFSVSL AP

Best Arabidopsis Sequence Match ( AT3G54720.1 )
(BLAST)

001: MSQPLTTRPT VTGISIIPFR QPPPLCSFLF VIVLFVATFY TLHHPDAVTP PLLFSRNAYN ALRLRRLFLS SASNATISSY LRELTRHPHL AGTKPSLDTL
101: HYVFNHFQSL GLETHVAEYE ALLSYPTHIS VTASFSNTTT LEFDLNDVPG DSPVVRPYHA YSPSGSAQGN VVFVNHGEER DYHALESIGV SVKGCVVLAR
201: KGENLGRGAI VKIAEAKGAL GVLIYAENDG GGFGGIERGT VMRGIGDPVS PGWPGVVGGE KLSLDDELVT RRFPKIPSLP LSLRNAEIIL ASLGGARAPL
301: EWRNSGRVGP GQRVGPGRMV INMTFQGEMK MKKINNVVVT IRGSEEADRY VILGNHRDAW TYGAVDPNSG TSALLDISRR FALLLKSGWR PRRTILLCSW
401: DAEEFGMIGS TEWIEENVLN LGASAVAYLN VDCAVQGSGF FAGATPQLDG LLVDVLKLVQ DPDAVGLTVE ETFKSQNNII QRLSRVDSDF SGFLHHAGIP
501: SIDMYYGADY PVYHTAFDSY DWMIHNADPL FHRHVAMAGI WGLLGILLAD EPLIPFDYIS YADQLQAHRD KLSKLLEGKV SVNPLSMAIQ EFSLVAKEAA
601: DEAKKLKGKS YSKNDVAAAA KRRELNDRLM LVERGFLDAE GIKGKEWFKH LVYGPAAEPE SKLGFFPGIA DAIAMNASEG IIEHEIWRVA RAIQRASKAL
701: KGGFT

Arabidopsis Description

AMP1Probable glutamate carboxypeptidase AMP1 [Source:UniProtKB/Swiss-Prot;Acc:Q9M1S8]
SUBAcon: [plastid]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.