Factsheet for VIT_00s0319g00060.t01

Subcellular Localization

min:

: max

Winner_takes_all: endoplasmic reticulum, plasma membrane

Predictor Summary:

plastid 3
golgi 4
extracellular 4
endoplasmic reticulum 4
vacuole 4
plasma membrane 5
cytosol 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	endoplasmic reticulum, plasma membrane
Any Predictor:	cytosol, plastid, secretory
BaCelLo:	plastid
EpiLoc:	golgi
iPSORT:	secretory
MultiLoc:	endoplasmic reticulum
Plant-mPloc:	cytosol, extracellular, plasma membrane, plastid, vacuole
PProwler:	secretory
TargetP:	secretory
WoLF PSORT:	plastid
YLoc:	plasma membrane

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
VIT_00s0327g00020.t01	Wine grape	endoplasmic reticulum, plasma membrane	76.32	81.12
VIT_00s0352g00020.t01	Wine grape	mitochondrion	75.0	80.0
KRH03146	Soybean	mitochondrion	21.38	65.66
VIT_00s0285g00060.t01	Wine grape	cytosol	75.0	60.16
VIT_08s0032g00670.t01	Wine grape	cytosol	75.99	56.07
KRH07659	Soybean	cytosol, extracellular, plastid	20.39	52.1
GSMUA_Achr4P31300_001	Banana	cytosol	56.25	43.96
HORVU5Hr1G103900.13	Barley	cytosol	48.36	36.75
CDX76133	Canola	cytosol	55.92	36.72
Solyc11g045250.1.1	Tomato	plastid	65.46	33.9
KRH68064	Soybean	endoplasmic reticulum	62.5	27.38
KRG96329	Soybean	plasma membrane	62.5	27.3
KRH32940	Soybean	plastid	61.18	26.76
Bra014794.1-P	Field mustard	plastid	55.59	24.18
CDX78257	Canola	plastid	55.92	24.11
CDX73456	Canola	plastid	55.59	24.07
Bra007091.1-P	Field mustard	plastid	55.59	23.97
AT3G54720.1	Thale cress	plastid	55.26	23.83
GSMUA_Achr5P02690_001	Banana	mitochondrion	54.61	23.78
TraesCS5D01G435600.1	Wheat	endoplasmic reticulum, plasma membrane, plastid	54.61	23.31
TraesCS5A01G427500.1	Wheat	endoplasmic reticulum, plasma membrane	54.28	23.17
TraesCS5B01G429500.1	Wheat	endoplasmic reticulum, plasma membrane, vacuole	54.28	23.17
EER93326	Sorghum	plasma membrane, vacuole	52.3	22.36
Zm00001d034383_P003	Maize	plasma membrane, plastid, vacuole	51.97	22.16
Os03t0790600-01	Rice	mitochondrion	54.61	21.5
VIT_11s0016g03010.t01	Wine grape	cytosol	47.37	18.68
VIT_11s0065g00570.t01	Wine grape	cytosol	1.64	4.0
Solyc11g045240.1.1	Tomato	cytosol	0.99	3.7
HORVU3Hr1G104570.2	Barley	plastid	1.97	1.99
HORVU3Hr1G080240.1	Barley	plastid	1.97	1.99
HORVU5Hr1G007810.6	Barley	endoplasmic reticulum, plasma membrane, plastid	1.97	1.99
HORVU6Hr1G029960.1	Barley	mitochondrion	0.99	1.56
CDX76132	Canola	plastid	0.0	0.0

Protein Annotations

ArrayExpress:VIT_00s0319g00060	EMBL:FN595536	EnsemblPlants:VIT_00s0319g00060.t01	EnsemblPlantsGene:VIT_00s0319g00060	Gene3D:3.40.630.10	InterPro:Peptidase_M28
PANTHER:PTHR10404	PANTHER:PTHR10404:SF63	PFAM:PF04389	ProteinID:CCB50127	ProteinID:CCB50127.1	SUPFAM:SSF53187
UniParc:UPI000210A3E9	UniProt:F6HD32	MapMan:19.4.5.7.3	:	:	:

Description

No Description!

Coordinates

chrUn:+:23156525..23162744

Molecular Weight (calculated)

34463.3 Da

IEP (calculated)

5.754

GRAVY (calculated)

-0.039

Length

304 amino acids

Sequence
(BLAST)

001: MSGRLLLKPT CGKLIEMFLH LFYFFPLFQA EKKIATIHNV FAVIRGSEEP DRYVLLGNHR DAWTYGAVDP NSGTAGLLDI ACRYALMMRQ GWQPRRTIVL
101: CSWDAEEFGM IGSTEWVEQN LLNLGSEVVA YLNVDCAVQG PGFFAAATPQ LDNLLIEVAK KVQDPDSESM TIYDNWMITN KVINIQRLSG VDSDFSPLLQ
201: HAGVPSVDLY YGRDFPVYHT AFDSYNWMTN HGDPLFQRHV AVAGVWGLLA LHLADDPILP FNYVSYIEQL WNYTNLLRNL GERYCIPAPY NCIHSGTHLC
301: SRRS

Best Arabidopsis Sequence Match ( AT3G54720.1 )
(BLAST)

001: MSQPLTTRPT VTGISIIPFR QPPPLCSFLF VIVLFVATFY TLHHPDAVTP PLLFSRNAYN ALRLRRLFLS SASNATISSY LRELTRHPHL AGTKPSLDTL
101: HYVFNHFQSL GLETHVAEYE ALLSYPTHIS VTASFSNTTT LEFDLNDVPG DSPVVRPYHA YSPSGSAQGN VVFVNHGEER DYHALESIGV SVKGCVVLAR
201: KGENLGRGAI VKIAEAKGAL GVLIYAENDG GGFGGIERGT VMRGIGDPVS PGWPGVVGGE KLSLDDELVT RRFPKIPSLP LSLRNAEIIL ASLGGARAPL
301: EWRNSGRVGP GQRVGPGRMV INMTFQGEMK MKKINNVVVT IRGSEEADRY VILGNHRDAW TYGAVDPNSG TSALLDISRR FALLLKSGWR PRRTILLCSW
401: DAEEFGMIGS TEWIEENVLN LGASAVAYLN VDCAVQGSGF FAGATPQLDG LLVDVLKLVQ DPDAVGLTVE ETFKSQNNII QRLSRVDSDF SGFLHHAGIP
501: SIDMYYGADY PVYHTAFDSY DWMIHNADPL FHRHVAMAGI WGLLGILLAD EPLIPFDYIS YADQLQAHRD KLSKLLEGKV SVNPLSMAIQ EFSLVAKEAA
601: DEAKKLKGKS YSKNDVAAAA KRRELNDRLM LVERGFLDAE GIKGKEWFKH LVYGPAAEPE SKLGFFPGIA DAIAMNASEG IIEHEIWRVA RAIQRASKAL
701: KGGFT

Arabidopsis Description

AMP1Probable glutamate carboxypeptidase AMP1 [Source:UniProtKB/Swiss-Prot;Acc:Q9M1S8]
SUBAcon: [plastid]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.