Factsheet for Solyc11g045240.1.1

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 1
vacuole 1
cytosol 3
mitochondrion 2
plastid 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Solyc12g008550.1.1	Tomato	cytosol, endoplasmic reticulum, extracellular, golgi, plasma membrane, vacuole	39.51	12.36
VIT_08s0032g00670.t01	Wine grape	cytosol	61.73	12.14
GSMUA_Achr4P31300_001	Banana	cytosol	55.56	11.57
HORVU5Hr1G103900.13	Barley	cytosol	49.38	10.0
CDX76133	Canola	cytosol	50.62	8.86
GSMUA_Achr5P02690_001	Banana	mitochondrion	59.26	6.88
KRH32940	Soybean	plastid	56.79	6.62
KRG96329	Soybean	plasma membrane	56.79	6.61
CDX78257	Canola	plastid	56.79	6.52
CDX73456	Canola	plastid	55.56	6.41
KRH68064	Soybean	endoplasmic reticulum	53.09	6.2
Bra007091.1-P	Field mustard	plastid	51.85	5.96
AT3G54720.1	Thale cress	plastid	51.85	5.96
Bra014794.1-P	Field mustard	plastid	50.62	5.87
TraesCS5B01G429500.1	Wheat	endoplasmic reticulum, plasma membrane, vacuole	50.62	5.76
Zm00001d034383_P003	Maize	plasma membrane, plastid, vacuole	50.62	5.75
EER93326	Sorghum	plasma membrane, vacuole	49.38	5.63
TraesCS5D01G435600.1	Wheat	endoplasmic reticulum, plasma membrane, plastid	49.38	5.62
Os03t0790600-01	Rice	mitochondrion	53.09	5.57
TraesCS5A01G427500.1	Wheat	endoplasmic reticulum, plasma membrane	48.15	5.48
VIT_00s0319g00060.t01	Wine grape	endoplasmic reticulum, plasma membrane	3.7	0.99
KRH07659	Soybean	cytosol, extracellular, plastid	1.23	0.84
VIT_00s0285g00060.t01	Wine grape	cytosol	2.47	0.53
CDX76132	Canola	plastid	0.0	0.0
KRH03146	Soybean	mitochondrion	0.0	0.0
VIT_11s0065g00570.t01	Wine grape	cytosol	0.0	0.0
VIT_00s0352g00020.t01	Wine grape	mitochondrion	0.0	0.0
VIT_00s0327g00020.t01	Wine grape	endoplasmic reticulum, plasma membrane	0.0	0.0
HORVU3Hr1G080240.1	Barley	plastid	0.0	0.0
HORVU3Hr1G104570.2	Barley	plastid	0.0	0.0
Solyc12g008540.1.1	Tomato	extracellular	0.0	0.0
Solyc11g045250.1.1	Tomato	plastid	0.0	0.0
HORVU5Hr1G007810.6	Barley	endoplasmic reticulum, plasma membrane, plastid	0.0	0.0
HORVU6Hr1G029960.1	Barley	mitochondrion	0.0	0.0

Protein Annotations

EnsemblPlants:Solyc11g045240.1.1	EnsemblPlantsGene:Solyc11g045240.1	Gene3D:1.20.930.40	InterPro:IPR036757	InterPro:TFR-like_dimer_dom	InterPro:TFR-like_dimer_dom_sf
PANTHER:PTHR10404	PANTHER:PTHR10404:SF63	PFAM:PF04253	SUPFAM:SSF47672	UniParc:UPI000276A76B	UniProt:K4D8I8
MapMan:35.1	:	:	:	:	:

Description

No Description!

Coordinates

chr11:+:31376333..31377548

Molecular Weight (calculated)

9004.6 Da

IEP (calculated)

6.244

GRAVY (calculated)

-0.432

Length

81 amino acids

Sequence
(BLAST)

1: MFAERGFLDA EGLQGRPWFK HMVYGPRNDG ESELYFFPGI ANAISKSSGG EEQNAAIQHE IWRSARAIER AAHALKGELI A

Best Arabidopsis Sequence Match ( AT3G54720.1 )
(BLAST)

001: MSQPLTTRPT VTGISIIPFR QPPPLCSFLF VIVLFVATFY TLHHPDAVTP PLLFSRNAYN ALRLRRLFLS SASNATISSY LRELTRHPHL AGTKPSLDTL
101: HYVFNHFQSL GLETHVAEYE ALLSYPTHIS VTASFSNTTT LEFDLNDVPG DSPVVRPYHA YSPSGSAQGN VVFVNHGEER DYHALESIGV SVKGCVVLAR
201: KGENLGRGAI VKIAEAKGAL GVLIYAENDG GGFGGIERGT VMRGIGDPVS PGWPGVVGGE KLSLDDELVT RRFPKIPSLP LSLRNAEIIL ASLGGARAPL
301: EWRNSGRVGP GQRVGPGRMV INMTFQGEMK MKKINNVVVT IRGSEEADRY VILGNHRDAW TYGAVDPNSG TSALLDISRR FALLLKSGWR PRRTILLCSW
401: DAEEFGMIGS TEWIEENVLN LGASAVAYLN VDCAVQGSGF FAGATPQLDG LLVDVLKLVQ DPDAVGLTVE ETFKSQNNII QRLSRVDSDF SGFLHHAGIP
501: SIDMYYGADY PVYHTAFDSY DWMIHNADPL FHRHVAMAGI WGLLGILLAD EPLIPFDYIS YADQLQAHRD KLSKLLEGKV SVNPLSMAIQ EFSLVAKEAA
601: DEAKKLKGKS YSKNDVAAAA KRRELNDRLM LVERGFLDAE GIKGKEWFKH LVYGPAAEPE SKLGFFPGIA DAIAMNASEG IIEHEIWRVA RAIQRASKAL
701: KGGFT

Arabidopsis Description

AMP1Probable glutamate carboxypeptidase AMP1 [Source:UniProtKB/Swiss-Prot;Acc:Q9M1S8]
SUBAcon: [plastid]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.