Factsheet for Solyc11g045250.1.1

Subcellular Localization

min:

: max

Winner_takes_all: plastid

Predictor Summary:

plastid 4
vacuole 4
extracellular 4
endoplasmic reticulum 3
plasma membrane 4
golgi 3
cytosol 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	plastid
Any Predictor:	cytosol, plastid, secretory
BaCelLo:	plastid
ChloroP:	plastid
EpiLoc:	vacuole
iPSORT:	secretory
MultiLoc:	extracellular
Plant-mPloc:	cytosol
Predotar:	plastid
PProwler:	secretory
TargetP:	secretory
WoLF PSORT:	plastid
YLoc:	plasma membrane

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
VIT_00s0327g00020.t01	Wine grape	endoplasmic reticulum, plasma membrane	33.73	69.23
VIT_00s0352g00020.t01	Wine grape	mitochondrion	33.56	69.12
KRH03146	Soybean	mitochondrion	11.41	67.68
VIT_00s0285g00060.t01	Wine grape	cytosol	43.27	67.02
VIT_00s0319g00060.t01	Wine grape	endoplasmic reticulum, plasma membrane	33.9	65.46
KRH07659	Soybean	cytosol, extracellular, plastid	11.75	57.98
VIT_11s0065g00570.t01	Wine grape	cytosol	11.41	53.6
Solyc12g008540.1.1	Tomato	extracellular	7.67	53.57
VIT_08s0032g00670.t01	Wine grape	cytosol	37.14	52.91
KRG96329	Soybean	plasma membrane	60.31	50.86
KRH68064	Soybean	endoplasmic reticulum	59.11	50.0
KRH32940	Soybean	plastid	57.92	48.92
CDX76133	Canola	cytosol	37.82	47.95
GSMUA_Achr4P31300_001	Banana	cytosol	31.35	47.3
AT3G54720.1	Thale cress	plastid	55.54	46.24
CDX73456	Canola	plastid	54.51	45.58
Bra014794.1-P	Field mustard	plastid	53.66	45.06
Bra007091.1-P	Field mustard	plastid	53.32	44.4
CDX78257	Canola	plastid	52.98	44.11
TraesCS5D01G435600.1	Wheat	endoplasmic reticulum, plasma membrane, plastid	49.4	40.73
TraesCS5A01G427500.1	Wheat	endoplasmic reticulum, plasma membrane	49.23	40.59
TraesCS5B01G429500.1	Wheat	endoplasmic reticulum, plasma membrane, vacuole	49.23	40.59
Zm00001d034383_P003	Maize	plasma membrane, plastid, vacuole	49.23	40.53
EER93326	Sorghum	plasma membrane, vacuole	48.72	40.23
HORVU5Hr1G103900.13	Barley	cytosol	26.92	39.5
GSMUA_Achr5P02690_001	Banana	mitochondrion	46.68	39.26
CDX76132	Canola	plastid	13.12	38.69
HORVU6Hr1G029960.1	Barley	mitochondrion	12.44	38.02
Os03t0790600-01	Rice	mitochondrion	48.55	36.92
HORVU3Hr1G080240.1	Barley	plastid	16.7	32.56
HORVU5Hr1G007810.6	Barley	endoplasmic reticulum, plasma membrane, plastid	16.7	32.45
HORVU3Hr1G104570.2	Barley	plastid	16.52	32.23
Solyc12g008550.1.1	Tomato	cytosol, endoplasmic reticulum, extracellular, golgi, plasma membrane, vacuole	10.56	23.94
Solyc11g045240.1.1	Tomato	cytosol	0.0	0.0

Protein Annotations

EnsemblPlants:Solyc11g045250.1.1	EnsemblPlantsGene:Solyc11g045250.1	Gene3D:3.40.630.10	Gene3D:3.50.30.30	GO:GO:0005575	GO:GO:0016020
GO:GO:0016021	InterPro:Peptidase_M28	PANTHER:PTHR10404	PANTHER:PTHR10404:SF63	PFAM:PF04389	SUPFAM:SSF52025
SUPFAM:SSF53187	TMHMM:TMhelix	UniParc:UPI000276A76C	UniProt:K4D8I9	MapMan:19.4.5.7.3	:

Description

No Description!

Coordinates

chr11:+:31356638..31370457

Molecular Weight (calculated)

65232.0 Da

IEP (calculated)

7.046

GRAVY (calculated)

-0.089

Length

587 amino acids

Sequence
(BLAST)

001: MLHLCSDLHF SIKTWSFFSM LFILAFFTTL NYYQHSTPTS LFYFNSFISS ATNYTLATYL RHLTLHPHLA GTAPSLHTAL YVKSHFQSLN LQTHVANYSV
101: LLSYPLFSSV ILHFPNGSVL SLGLVEPGFS SSGVVKPYHA YSPSGSAYGE PCFLNYGREK DYIALGASGV KVKGCVGIVR RGGGLSRNEM VEKAAARGVK
201: AVLMFTEGEF ENGVERGTVM NGLGDPLSPG WGGVENGEKL RMDDPLVMQR FPSIHSLPIS MKSAEIILKS LEGPEMPYEW RKSLRCSTSG RLGPGPIMIN
301: FTYQGEKKMA TVHNVFAVIR GSQEPDRFVL LGNHRDAWTY GAVDPNSGTA ALLDIARRYA LLMRLGWNPR RTIILCSWDA EEFGMIGSTE WVEQNLINLG
401: SKSVAYLNVD CAVQGPGFFP STTPQFDNLL TEITKKINDP DSEGMTLYER WTAADRGIKI QRLSGVDSDF APFLHHAGVP SVDLYYGRDF PVYHTAFDSY
501: NWMVNFGDPF FQRHVAVTGV WGLLALRLAD DPILPFNYRP YAAELQDYTR ILSKLLEGRN ISLHPITAAT QELAATAKET LDEAKSQ

Best Arabidopsis Sequence Match ( AT3G54720.1 )
(BLAST)

001: MSQPLTTRPT VTGISIIPFR QPPPLCSFLF VIVLFVATFY TLHHPDAVTP PLLFSRNAYN ALRLRRLFLS SASNATISSY LRELTRHPHL AGTKPSLDTL
101: HYVFNHFQSL GLETHVAEYE ALLSYPTHIS VTASFSNTTT LEFDLNDVPG DSPVVRPYHA YSPSGSAQGN VVFVNHGEER DYHALESIGV SVKGCVVLAR
201: KGENLGRGAI VKIAEAKGAL GVLIYAENDG GGFGGIERGT VMRGIGDPVS PGWPGVVGGE KLSLDDELVT RRFPKIPSLP LSLRNAEIIL ASLGGARAPL
301: EWRNSGRVGP GQRVGPGRMV INMTFQGEMK MKKINNVVVT IRGSEEADRY VILGNHRDAW TYGAVDPNSG TSALLDISRR FALLLKSGWR PRRTILLCSW
401: DAEEFGMIGS TEWIEENVLN LGASAVAYLN VDCAVQGSGF FAGATPQLDG LLVDVLKLVQ DPDAVGLTVE ETFKSQNNII QRLSRVDSDF SGFLHHAGIP
501: SIDMYYGADY PVYHTAFDSY DWMIHNADPL FHRHVAMAGI WGLLGILLAD EPLIPFDYIS YADQLQAHRD KLSKLLEGKV SVNPLSMAIQ EFSLVAKEAA
601: DEAKKLKGKS YSKNDVAAAA KRRELNDRLM LVERGFLDAE GIKGKEWFKH LVYGPAAEPE SKLGFFPGIA DAIAMNASEG IIEHEIWRVA RAIQRASKAL
701: KGGFT

Arabidopsis Description

AMP1Probable glutamate carboxypeptidase AMP1 [Source:UniProtKB/Swiss-Prot;Acc:Q9M1S8]
SUBAcon: [plastid]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.