CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: plasma membrane, vacuole

Predictor Summary:

plastid 2
vacuole 5
extracellular 3
endoplasmic reticulum 3
plasma membrane 4
golgi 3
cytosol 1
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	plasma membrane, vacuole
Any Predictor:	cytosol, mitochondrion, plastid, secretory
BaCelLo:	plastid
EpiLoc:	vacuole
iPSORT:	secretory
MultiLoc:	vacuole
Plant-mPloc:	cytosol
Predotar:	secretory
PProwler:	secretory
TargetP:	mitochondrion
WoLF PSORT:	plastid
YLoc:	plasma membrane

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Zm00001d034383_P003	Maize	plasma membrane, plastid, vacuole	89.59	89.34
TraesCS5B01G429500.1	Wheat	endoplasmic reticulum, plasma membrane, vacuole	73.42	73.31
TraesCS5D01G435600.1	Wheat	endoplasmic reticulum, plasma membrane, plastid	73.28	73.17
TraesCS5A01G427500.1	Wheat	endoplasmic reticulum, plasma membrane	72.43	72.33
HORVU5Hr1G007810.6	Barley	endoplasmic reticulum, plasma membrane, plastid	29.96	70.53
HORVU5Hr1G103900.13	Barley	cytosol	39.38	70.0
Os03t0790600-01	Rice	mitochondrion	75.95	69.95
HORVU6Hr1G029960.1	Barley	mitochondrion	18.42	68.23
KRH03146	Soybean	mitochondrion	8.86	63.64
HORVU3Hr1G104570.2	Barley	plastid	26.58	62.79
HORVU3Hr1G080240.1	Barley	plastid	26.16	61.79
GSMUA_Achr4P31300_001	Banana	cytosol	33.61	61.44
VIT_00s0285g00060.t01	Wine grape	cytosol	30.8	57.78
KRH07659	Soybean	cytosol, extracellular, plastid	9.56	57.14
VIT_08s0032g00670.t01	Wine grape	cytosol	32.35	55.83
VIT_00s0352g00020.t01	Wine grape	mitochondrion	22.22	55.44
VIT_00s0327g00020.t01	Wine grape	endoplasmic reticulum, plasma membrane	22.08	54.9
CDX76133	Canola	cytosol	35.44	54.43
GSMUA_Achr5P02690_001	Banana	mitochondrion	52.6	53.58
VIT_00s0319g00060.t01	Wine grape	endoplasmic reticulum, plasma membrane	22.36	52.3
KRH32940	Soybean	plastid	50.91	52.09
KRG96329	Soybean	plasma membrane	50.07	51.15
KRH68064	Soybean	endoplasmic reticulum	49.79	51.01
VIT_11s0065g00570.t01	Wine grape	cytosol	8.86	50.4
Solyc11g045240.1.1	Tomato	cytosol	5.63	49.38
Bra007091.1-P	Field mustard	plastid	48.52	48.94
Solyc11g045250.1.1	Tomato	plastid	40.23	48.72
AT3G54720.1	Thale cress	plastid	47.4	47.8
CDX73456	Canola	plastid	46.98	47.58
CDX78257	Canola	plastid	47.12	47.52
Bra014794.1-P	Field mustard	plastid	46.69	47.5
EES01459	Sorghum	cytosol, endoplasmic reticulum, peroxisome, plastid	39.66	38.84
KXG33331	Sorghum	endoplasmic reticulum, plasma membrane, plastid	39.94	38.8
CDX76132	Canola	plastid	9.14	32.66

Protein Annotations

Gene3D:1.20.930.40	MapMan:19.4.5.7.3	Gene3D:3.40.630.10	Gene3D:3.50.30.30	EntrezGene:8084129	UniProt:C5WY45
EnsemblPlants:EER93326	ProteinID:EER93326	ProteinID:EER93326.1	GO:GO:0000003	GO:GO:0003674	GO:GO:0003824
GO:GO:0004181	GO:GO:0006508	GO:GO:0007275	GO:GO:0008150	GO:GO:0008152	GO:GO:0009628
GO:GO:0009640	GO:GO:0009653	GO:GO:0009790	GO:GO:0009791	GO:GO:0009793	GO:GO:0009908
GO:GO:0010080	GO:GO:0010081	GO:GO:0010082	GO:GO:0010305	GO:GO:0016787	GO:GO:0019538
GO:GO:0040007	GO:GO:0048364	GO:GO:0048507	InterPro:IPR036757	PFAM:PF04253	PFAM:PF04389
PANTHER:PTHR10404	PANTHER:PTHR10404:SF63	InterPro:Peptidase_M28	EnsemblPlantsGene:SORBI_3001G062900	SUPFAM:SSF47672	SUPFAM:SSF52025
SUPFAM:SSF53187	InterPro:TFR-like_dimer_dom	InterPro:TFR-like_dimer_dom_sf	TMHMM:TMhelix	UniParc:UPI0001A82B6D	RefSeq:XP_002466328.1
SEG:seg	:	:	:	:	:

Description

hypothetical protein

Coordinates

chr1:-:4700934..4706989

Molecular Weight (calculated)

77138.4 Da

IEP (calculated)

7.614

GRAVY (calculated)

-0.110

Length

711 amino acids

Sequence
(BLAST)

001: MPHSVLARLP HGSIRLVVAF GLLLLVSLLV LHRRPGRPHA AAAAAGGRLS DPAGLFLSLS PGANASIAAD LRALTAGPHL AGTRASAGAA AHVLARLRAA
101: GLRTLTREYE PLLSYPGHAS LALLRPDGSL LARLSLEEPA DVGRRVVRPY HAYAPSGGAV AEAVFVNLGR EEDYAALERL GVGVRGRVAV ARRGGGYRGG
201: VVARAAEKGA VAVLIAGNAD GGVERGVVLL GGPGDPLTPG WAATSGAERL GFDDKAVKRR FPSIPSMPVS AKTAAAIIRS LGGPAMPAEW KDGLGVDVGG
301: VGPGPTLVNF TYQEDRKFYK IRDIFGIIKG QEEPDRYVIL GNHRDAWTYG AVDPNSGTAA LLDIARRLGT MLQSGWKPRR SIILCSWDAE EFGMIGSTEW
401: VEENLEDLHS KAVAYLNVDC AVQGVGFFAG STPQLDKLLV DITRQVKDPD VTGKMVHDTW NEMSGSIKIE RLARTDSDFA PFLHHAGIPS VDLYYGEEFP
501: GYHTALDTYN WMEKHGDPLF LRHLAITEIW GLLALRLAND PVLPFDYQAY TSDLQEHIKT FSALTDNGHA VNLMNGFVND LSGAAMEVVK EMKKLQQLDL
601: YDDHARMRRR LLNDRLLLAE RSFLQPEGLQ GRGWFKHLLY SPPEDYESKF SFFPGIADAI SRSANLSDKE REVAVQHEVW KVCRAIQRAA SVLRGEFSER
701: KPINFSSLVA P

Best Arabidopsis Sequence Match ( AT3G54720.1 )
(BLAST)

001: MSQPLTTRPT VTGISIIPFR QPPPLCSFLF VIVLFVATFY TLHHPDAVTP PLLFSRNAYN ALRLRRLFLS SASNATISSY LRELTRHPHL AGTKPSLDTL
101: HYVFNHFQSL GLETHVAEYE ALLSYPTHIS VTASFSNTTT LEFDLNDVPG DSPVVRPYHA YSPSGSAQGN VVFVNHGEER DYHALESIGV SVKGCVVLAR
201: KGENLGRGAI VKIAEAKGAL GVLIYAENDG GGFGGIERGT VMRGIGDPVS PGWPGVVGGE KLSLDDELVT RRFPKIPSLP LSLRNAEIIL ASLGGARAPL
301: EWRNSGRVGP GQRVGPGRMV INMTFQGEMK MKKINNVVVT IRGSEEADRY VILGNHRDAW TYGAVDPNSG TSALLDISRR FALLLKSGWR PRRTILLCSW
401: DAEEFGMIGS TEWIEENVLN LGASAVAYLN VDCAVQGSGF FAGATPQLDG LLVDVLKLVQ DPDAVGLTVE ETFKSQNNII QRLSRVDSDF SGFLHHAGIP
501: SIDMYYGADY PVYHTAFDSY DWMIHNADPL FHRHVAMAGI WGLLGILLAD EPLIPFDYIS YADQLQAHRD KLSKLLEGKV SVNPLSMAIQ EFSLVAKEAA
601: DEAKKLKGKS YSKNDVAAAA KRRELNDRLM LVERGFLDAE GIKGKEWFKH LVYGPAAEPE SKLGFFPGIA DAIAMNASEG IIEHEIWRVA RAIQRASKAL
701: KGGFT

Arabidopsis Description

AMP1Probable glutamate carboxypeptidase AMP1 [Source:UniProtKB/Swiss-Prot;Acc:Q9M1S8]
SUBAcon: [plastid]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.