Factsheet for HORVU5Hr1G103900.13

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

cytosol 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol
MultiLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
GSMUA_Achr4P31300_001	Banana	cytosol	55.25	56.81
HORVU0Hr1G020860.1	Barley	cytosol	18.0	54.14
KRH07659	Soybean	cytosol, extracellular, plastid	15.75	52.94
VIT_08s0032g00670.t01	Wine grape	cytosol	54.25	52.67
VIT_00s0327g00020.t01	Wine grape	endoplasmic reticulum, plasma membrane	36.75	51.4
VIT_00s0352g00020.t01	Wine grape	mitochondrion	36.5	51.23
Solyc11g045240.1.1	Tomato	cytosol	10.0	49.38
TraesCS5D01G435600.1	Wheat	endoplasmic reticulum, plasma membrane, plastid	87.25	49.02
VIT_00s0319g00060.t01	Wine grape	endoplasmic reticulum, plasma membrane	36.75	48.36
TraesCS5A01G427500.1	Wheat	endoplasmic reticulum, plasma membrane	86.0	48.31
TraesCS5B01G429500.1	Wheat	endoplasmic reticulum, plasma membrane, vacuole	85.25	47.89
KRH03146	Soybean	mitochondrion	11.5	46.46
HORVU3Hr1G070540.14	Barley	cytosol, extracellular	41.0	43.5
CDX76133	Canola	cytosol	50.25	43.41
EER93326	Sorghum	plasma membrane, vacuole	70.0	39.38
VIT_00s0285g00060.t01	Wine grape	cytosol	37.25	39.31
Zm00001d034383_P003	Maize	plasma membrane, plastid, vacuole	69.5	38.99
Os03t0790600-01	Rice	mitochondrion	71.0	36.79
GSMUA_Achr5P02690_001	Banana	mitochondrion	58.0	33.24
KRH32940	Soybean	plastid	56.5	32.52
KRG96329	Soybean	plasma membrane	52.0	29.89
KRH68064	Soybean	endoplasmic reticulum	51.25	29.54
AT3G54720.1	Thale cress	plastid	50.75	28.79
Bra014794.1-P	Field mustard	plastid	50.25	28.76
Bra007091.1-P	Field mustard	plastid	50.5	28.65
CDX78257	Canola	plastid	49.5	28.09
CDX73456	Canola	plastid	49.25	28.06
Solyc11g045250.1.1	Tomato	plastid	39.5	26.92
HORVU3Hr1G070550.5	Barley	mitochondrion	41.75	22.3
HORVU3Hr1G070790.1	Barley	peroxisome, plasma membrane	40.25	21.07
HORVU0Hr1G020840.1	Barley	plastid	3.5	7.18
HORVU0Hr1G020850.2	Barley	plastid	3.25	3.25
HORVU5Hr1G103870.2	Barley	mitochondrion	1.25	1.31
HORVU6Hr1G029960.1	Barley	mitochondrion	0.5	1.04
HORVU3Hr1G104570.2	Barley	plastid	0.75	1.0
HORVU3Hr1G080240.1	Barley	plastid	0.75	1.0
HORVU5Hr1G007810.6	Barley	endoplasmic reticulum, plasma membrane, plastid	0.75	0.99
VIT_11s0065g00570.t01	Wine grape	cytosol	0.25	0.8
HORVU3Hr1G070560.2	Barley	plastid	0.5	0.54
CDX76132	Canola	plastid	0.0	0.0

Protein Annotations

EnsemblPlants:HORVU5Hr1G103900.13	EnsemblPlantsGene:HORVU5Hr1G103900	Gene3D:1.20.930.40	Gene3D:3.40.630.10	InterPro:IPR036757	InterPro:Peptidase_M28
InterPro:TFR-like_dimer_dom	InterPro:TFR-like_dimer_dom_sf	ncoils:Coil	PANTHER:PTHR10404	PANTHER:PTHR10404:SF63	PFAM:PF04253
PFAM:PF04389	SEG:seg	SUPFAM:SSF47672	SUPFAM:SSF53187	MapMan:19.4.5.7.3	:

Description

No Description!

Coordinates

chrchr5H:-:617557308..617562757

Molecular Weight (calculated)

43395.4 Da

IEP (calculated)

5.151

GRAVY (calculated)

-0.278

Length

400 amino acids

Sequence
(BLAST)

001: MTLSKNLSLE EIDEXXXXXX XXXXXXXXGN HRDAWTYGAV DPNSGTAALL DVACRLGIML RSGWTPRRTI ILSSWDAEEF GMIGSTEWVE ENLGDLQSKA
101: VAYLNVDCAV QGMGLFAGST PQLDKLLIDV TRQVKDPDVE GKTVHDTWST MNGGINIERL ARTDSDFAPF LHHAGIPCVD LYYGKEFPGY HTALDSYNWM
201: EKHGDPLFLR HLAITEIWGL LALRLADDLV LPFDYQTYAS QLQEHTNVLA DMVNNSQSVS IINGFINDLS SAATEVQKEA KELKLLDIHD GHDLMRRRLL
301: NDRLMLAERS FLHAEGLQGR TWYKHLLYSP PEDYESELSF FPGIADAISR SGKQSAKQRQ AVVRQELWRV TMAIQRAANV LRGEFGAHNK PINFRGEFAV

Best Arabidopsis Sequence Match ( AT3G54720.1 )
(BLAST)

001: MSQPLTTRPT VTGISIIPFR QPPPLCSFLF VIVLFVATFY TLHHPDAVTP PLLFSRNAYN ALRLRRLFLS SASNATISSY LRELTRHPHL AGTKPSLDTL
101: HYVFNHFQSL GLETHVAEYE ALLSYPTHIS VTASFSNTTT LEFDLNDVPG DSPVVRPYHA YSPSGSAQGN VVFVNHGEER DYHALESIGV SVKGCVVLAR
201: KGENLGRGAI VKIAEAKGAL GVLIYAENDG GGFGGIERGT VMRGIGDPVS PGWPGVVGGE KLSLDDELVT RRFPKIPSLP LSLRNAEIIL ASLGGARAPL
301: EWRNSGRVGP GQRVGPGRMV INMTFQGEMK MKKINNVVVT IRGSEEADRY VILGNHRDAW TYGAVDPNSG TSALLDISRR FALLLKSGWR PRRTILLCSW
401: DAEEFGMIGS TEWIEENVLN LGASAVAYLN VDCAVQGSGF FAGATPQLDG LLVDVLKLVQ DPDAVGLTVE ETFKSQNNII QRLSRVDSDF SGFLHHAGIP
501: SIDMYYGADY PVYHTAFDSY DWMIHNADPL FHRHVAMAGI WGLLGILLAD EPLIPFDYIS YADQLQAHRD KLSKLLEGKV SVNPLSMAIQ EFSLVAKEAA
601: DEAKKLKGKS YSKNDVAAAA KRRELNDRLM LVERGFLDAE GIKGKEWFKH LVYGPAAEPE SKLGFFPGIA DAIAMNASEG IIEHEIWRVA RAIQRASKAL
701: KGGFT

Arabidopsis Description

AMP1Probable glutamate carboxypeptidase AMP1 [Source:UniProtKB/Swiss-Prot;Acc:Q9M1S8]
SUBAcon: [plastid]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.