Factsheet for Bra014794.1-P

Subcellular Localization

min:

: max

Winner_takes_all: plastid

Predictor Summary:

plastid 5
vacuole 2
endoplasmic reticulum 2
golgi 2
extracellular 2
cytosol 1
plasma membrane 2

Predictors

GFP

MS/MS

Papers

Winner Takes All:	plastid
Any Predictor:	cytosol, plastid, secretory
BaCelLo:	plastid
ChloroP:	plastid
EpiLoc:	vacuole
iPSORT:	plastid
MultiLoc:	endoplasmic reticulum
Plant-mPloc:	cytosol, extracellular, golgi
Predotar:	plastid
PProwler:	secretory
WoLF PSORT:	plastid
YLoc:	plasma membrane

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDX76133	Canola	cytosol	64.23	96.98
CDX76132	Canola	plastid	26.47	92.96
Bra007091.1-P	Field mustard	plastid	86.12	85.39
AT3G54720.1	Thale cress	plastid	84.26	83.55
KRH03146	Soybean	mitochondrion	8.87	62.63
VIT_08s0032g00670.t01	Wine grape	cytosol	34.62	58.74
GSMUA_Achr4P31300_001	Banana	cytosol	32.33	58.1
VIT_00s0327g00020.t01	Wine grape	endoplasmic reticulum, plasma membrane	23.46	57.34
VIT_00s0352g00020.t01	Wine grape	mitochondrion	23.18	56.84
VIT_00s0285g00060.t01	Wine grape	cytosol	30.62	56.46
KRH07659	Soybean	cytosol, extracellular, plastid	9.59	56.3
VIT_00s0319g00060.t01	Wine grape	endoplasmic reticulum, plasma membrane	24.18	55.59
KRH32940	Soybean	plastid	54.94	55.25
KRG96329	Soybean	plasma membrane	53.79	54.02
Solyc11g045250.1.1	Tomato	plastid	45.06	53.66
KRH68064	Soybean	endoplasmic reticulum	52.93	53.31
Solyc11g045240.1.1	Tomato	cytosol	5.87	50.62
HORVU5Hr1G103900.13	Barley	cytosol	28.76	50.25
EER93326	Sorghum	plasma membrane, vacuole	47.5	46.69
Zm00001d034383_P003	Maize	plasma membrane, plastid, vacuole	47.35	46.42
TraesCS5B01G429500.1	Wheat	endoplasmic reticulum, plasma membrane, vacuole	47.21	46.35
TraesCS5D01G435600.1	Wheat	endoplasmic reticulum, plasma membrane, plastid	46.92	46.07
TraesCS5A01G427500.1	Wheat	endoplasmic reticulum, plasma membrane	46.64	45.79
GSMUA_Achr5P02690_001	Banana	mitochondrion	45.06	45.13
Os03t0790600-01	Rice	mitochondrion	47.21	42.75
VIT_11s0065g00570.t01	Wine grape	cytosol	7.3	40.8
HORVU6Hr1G029960.1	Barley	mitochondrion	10.3	37.5
HORVU5Hr1G007810.6	Barley	endoplasmic reticulum, plasma membrane, plastid	14.16	32.78
HORVU3Hr1G104570.2	Barley	plastid	13.59	31.56
HORVU3Hr1G080240.1	Barley	plastid	13.45	31.23

Protein Annotations

Gene3D:1.20.930.40	MapMan:19.4.5.7.3	Gene3D:3.40.630.10	Gene3D:3.50.30.30	EnsemblPlantsGene:Bra014794	EnsemblPlants:Bra014794.1
EnsemblPlants:Bra014794.1-P	GO:GO:0005575	GO:GO:0016020	GO:GO:0016021	InterPro:IPR036757	UniProt:M4DE75
InterPro:PA_domain	PFAM:PF02225	PFAM:PF04253	PFAM:PF04389	PANTHER:PTHR10404	PANTHER:PTHR10404:SF63
InterPro:Peptidase_M28	SUPFAM:SSF47672	SUPFAM:SSF52025	SUPFAM:SSF53187	InterPro:TFR-like_dimer_dom	InterPro:TFR-like_dimer_dom_sf
TMHMM:TMhelix	UniParc:UPI0002544D07	SEG:seg	:	:	:

Description

AT3G54720 (E=0.0) AMP1, COP2, HPT, PT | AMP1 (ALTERED MERISTEM PROGRAM 1); carboxypeptidase/ dipeptidase

Coordinates

chrA04:+:3200395..3203351

Molecular Weight (calculated)

76472.0 Da

IEP (calculated)

6.335

GRAVY (calculated)

-0.112

Length

699 amino acids

Sequence
(BLAST)

001: MSQPLTTVAG ISFRHPPPLC SFLFVIVLLV ATFYTLHHPD ATPPHLFSPN THNSLTLRRL FLSSASNATV SSYLHSLTRH PHLAGTKPSL DTLTYVLTHF
101: QSLRLDDTRV ADYEALLSYP THISVTARFS NNTTVEFDLN DDVSSSSDVV TPYHAYSPSG SAQGSVVFVN HGEERDYRAL EMIGVSVRGC LVLARKGETL
201: GRGVIVKIAE TQGALGVLIY DENDGGGLGG IERGTVMRGI GDPVSPGWPG VTGGEKLSVD DDRVSRRFPK IPSLPLSLNN AEILLASLGG ARAPVEWRSG
301: RVGSSQRVGP GRVVVNMTLQ GEMKMKKIHN VVATIRGSEE PDRFVILGNH RDAWTYGAVD PNSGTSALLD IGRRFALLLE SGWRPRRTIL LCSWDAEEFG
401: MIGSTEWVEE HVLNLGASAV AYLNVDCAVQ GSGFFAGATP QLDSVLVDAL KLVQDPDDVT LTVEETFKSQ NNIIERLSRV DSDFSGFLHH AGIPSIDMYY
501: GADYPVYHTA FDSYDWMIRN ADPLFHRHVA MAGIWGLLGI ILADEPVLPF DYISYAEQLQ AHRDALSKLL EGKVSIDPLS VAIQEFSLVA KEVADEAKKL
601: KEGAYRKNDV AAAARRRELN DRMMLAERGF LDSEGIKGKE WFKHLVYGPA AEPESKLGFF PGITDAIATN SSEGTIKHEI WRVARAIQRA SKALKGGFT

Best Arabidopsis Sequence Match ( AT3G54720.1 )
(BLAST)

001: MSQPLTTRPT VTGISIIPFR QPPPLCSFLF VIVLFVATFY TLHHPDAVTP PLLFSRNAYN ALRLRRLFLS SASNATISSY LRELTRHPHL AGTKPSLDTL
101: HYVFNHFQSL GLETHVAEYE ALLSYPTHIS VTASFSNTTT LEFDLNDVPG DSPVVRPYHA YSPSGSAQGN VVFVNHGEER DYHALESIGV SVKGCVVLAR
201: KGENLGRGAI VKIAEAKGAL GVLIYAENDG GGFGGIERGT VMRGIGDPVS PGWPGVVGGE KLSLDDELVT RRFPKIPSLP LSLRNAEIIL ASLGGARAPL
301: EWRNSGRVGP GQRVGPGRMV INMTFQGEMK MKKINNVVVT IRGSEEADRY VILGNHRDAW TYGAVDPNSG TSALLDISRR FALLLKSGWR PRRTILLCSW
401: DAEEFGMIGS TEWIEENVLN LGASAVAYLN VDCAVQGSGF FAGATPQLDG LLVDVLKLVQ DPDAVGLTVE ETFKSQNNII QRLSRVDSDF SGFLHHAGIP
501: SIDMYYGADY PVYHTAFDSY DWMIHNADPL FHRHVAMAGI WGLLGILLAD EPLIPFDYIS YADQLQAHRD KLSKLLEGKV SVNPLSMAIQ EFSLVAKEAA
601: DEAKKLKGKS YSKNDVAAAA KRRELNDRLM LVERGFLDAE GIKGKEWFKH LVYGPAAEPE SKLGFFPGIA DAIAMNASEG IIEHEIWRVA RAIQRASKAL
701: KGGFT

Arabidopsis Description

AMP1Probable glutamate carboxypeptidase AMP1 [Source:UniProtKB/Swiss-Prot;Acc:Q9M1S8]
SUBAcon: [plastid]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.