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Thale cress
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Thale cress
Subcellular Localization
min:
: max

 
Winner_takes_all: plastid

Predictor Summary:
  • plastid 5
  • endoplasmic reticulum 2
  • extracellular 1
  • vacuole 1
  • plasma membrane 2
  • golgi 1
Predictors GFP MS/MS Papers
Winner Takes All:plastid
Any Predictor:endoplasmic reticulum, plasma membrane, plastid
BaCelLo:plastid
ChloroP:plastid
iPSORT:plastid
MultiLoc:endoplasmic reticulum
Predotar:plastid
PProwler:secretory
WoLF PSORT:plastid
YLoc:plasma membrane
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
CDX76133 Canola cytosol 58.44 88.98
Bra007091.1-P Field mustard plastid 85.25 85.25
Bra014794.1-P Field mustard plastid 83.55 84.26
CDX73456 Canola plastid 83.4 83.76
CDX78257 Canola plastid 83.26 83.26
CDX76132 Canola plastid 20.0 70.85
KRH03146 Soybean mitochondrion 9.08 64.65
VIT_08s0032g00670.t01 Wine grape cytosol 35.04 59.95
GSMUA_Achr4P31300_001 Banana cytosol 32.48 58.87
VIT_00s0327g00020.t01 Wine grape endoplasmic reticulum, plasma membrane 23.26 57.34
KRH07659 Soybean cytosol, extracellular, plastid 9.65 57.14
VIT_00s0352g00020.t01 Wine grape mitochondrion 22.98 56.84
KRH32940 Soybean plastid 56.03 56.83
VIT_00s0285g00060.t01 Wine grape cytosol 30.5 56.73
Solyc11g045250.1.1 Tomato plastid 46.24 55.54
KRG96329 Soybean plasma membrane 54.61 55.32
VIT_00s0319g00060.t01 Wine grape endoplasmic reticulum, plasma membrane 23.83 55.26
KRH68064 Soybean endoplasmic reticulum 53.9 54.76
Solyc11g045240.1.1 Tomato cytosol 5.96 51.85
HORVU5Hr1G103900.13 Barley cytosol 28.79 50.75
EER93326 Sorghum plasma membrane, vacuole 47.8 47.4
Zm00001d034383_P003 Maize plasma membrane, plastid, vacuole 47.8 47.27
TraesCS5B01G429500.1 Wheat endoplasmic reticulum, plasma membrane, vacuole 47.38 46.91
TraesCS5D01G435600.1 Wheat endoplasmic reticulum, plasma membrane, plastid 47.23 46.77
TraesCS5A01G427500.1 Wheat endoplasmic reticulum, plasma membrane 46.81 46.35
GSMUA_Achr5P02690_001 Banana mitochondrion 45.53 45.99
Os03t0790600-01 Rice mitochondrion 47.8 43.65
VIT_11s0065g00570.t01 Wine grape cytosol 7.52 42.4
HORVU6Hr1G029960.1 Barley mitochondrion 11.49 42.19
AT5G19740.1 Thale cress vacuole 39.72 41.12
AT4G07670.1 Thale cress cytosol 15.6 39.29
HORVU5Hr1G007810.6 Barley endoplasmic reticulum, plasma membrane, plastid 15.6 36.42
HORVU3Hr1G104570.2 Barley plastid 15.18 35.55
HORVU3Hr1G080240.1 Barley plastid 14.89 34.88
Protein Annotations
Gene3D:1.20.930.40MapMan:19.4.5.7.3Gene3D:3.40.630.10Gene3D:3.50.30.30EntrezGene:824637ProteinID:AEE79270.1
EMBL:AF357217Symbol:AMP1ArrayExpress:AT3G54720EnsemblPlantsGene:AT3G54720RefSeq:AT3G54720TAIR:AT3G54720
RefSeq:AT3G54720-TAIR-GEnsemblPlants:AT3G54720.1TAIR:AT3G54720.1Unigene:At.1213EMBL:BT046200ProteinID:CAB77592.1
GO:GO:0000003GO:GO:0003674GO:GO:0003824GO:GO:0004180GO:GO:0004181GO:GO:0005488
GO:GO:0005515GO:GO:0005575GO:GO:0005622GO:GO:0005623GO:GO:0005737GO:GO:0005783
GO:GO:0005789GO:GO:0006508GO:GO:0007275GO:GO:0008150GO:GO:0008152GO:GO:0008233
GO:GO:0008237GO:GO:0009628GO:GO:0009640GO:GO:0009653GO:GO:0009790GO:GO:0009791
GO:GO:0009793GO:GO:0009908GO:GO:0010080GO:GO:0010081GO:GO:0010082GO:GO:0010305
GO:GO:0016020GO:GO:0016021GO:GO:0016787GO:GO:0019538GO:GO:0040007GO:GO:0046872
GO:GO:0048364GO:GO:0048507InterPro:IPR036757MEROPS:M28.007RefSeq:NP_567007.1InterPro:PA_domain
PFAM:PF02225PFAM:PF04253PFAM:PF04389PO:PO:0000003PO:PO:0000013PO:PO:0000037
PO:PO:0000084PO:PO:0000230PO:PO:0000293PO:PO:0001054PO:PO:0001078PO:PO:0001081
PO:PO:0001185PO:PO:0004507PO:PO:0007064PO:PO:0007095PO:PO:0007098PO:PO:0007103
PO:PO:0007115PO:PO:0007123PO:PO:0007611PO:PO:0007616PO:PO:0008019PO:PO:0009005
PO:PO:0009006PO:PO:0009009PO:PO:0009010PO:PO:0009025PO:PO:0009031PO:PO:0009032
PO:PO:0009046PO:PO:0009047PO:PO:0009052PO:PO:0020030PO:PO:0020038PO:PO:0020094
PO:PO:0020100PO:PO:0020137PO:PO:0025022PANTHER:PTHR10404PANTHER:PTHR10404:SF63InterPro:Peptidase_M28
UniProt:Q9M1S8SUPFAM:SSF47672SUPFAM:SSF52025SUPFAM:SSF53187InterPro:TFR-like_dimer_domInterPro:TFR-like_dimer_dom_sf
TMHMM:TMhelixUniParc:UPI0000163714SEG:seg:::
Description
AMP1Probable glutamate carboxypeptidase AMP1 [Source:UniProtKB/Swiss-Prot;Acc:Q9M1S8]
Coordinates
chr3:-:20254639..20257916
Molecular Weight (calculated)
77157.5 Da
IEP (calculated)
6.895
GRAVY (calculated)
-0.060
Length
705 amino acids
Sequence
(BLAST)
001: MSQPLTTRPT VTGISIIPFR QPPPLCSFLF VIVLFVATFY TLHHPDAVTP PLLFSRNAYN ALRLRRLFLS SASNATISSY LRELTRHPHL AGTKPSLDTL
101: HYVFNHFQSL GLETHVAEYE ALLSYPTHIS VTASFSNTTT LEFDLNDVPG DSPVVRPYHA YSPSGSAQGN VVFVNHGEER DYHALESIGV SVKGCVVLAR
201: KGENLGRGAI VKIAEAKGAL GVLIYAENDG GGFGGIERGT VMRGIGDPVS PGWPGVVGGE KLSLDDELVT RRFPKIPSLP LSLRNAEIIL ASLGGARAPL
301: EWRNSGRVGP GQRVGPGRMV INMTFQGEMK MKKINNVVVT IRGSEEADRY VILGNHRDAW TYGAVDPNSG TSALLDISRR FALLLKSGWR PRRTILLCSW
401: DAEEFGMIGS TEWIEENVLN LGASAVAYLN VDCAVQGSGF FAGATPQLDG LLVDVLKLVQ DPDAVGLTVE ETFKSQNNII QRLSRVDSDF SGFLHHAGIP
501: SIDMYYGADY PVYHTAFDSY DWMIHNADPL FHRHVAMAGI WGLLGILLAD EPLIPFDYIS YADQLQAHRD KLSKLLEGKV SVNPLSMAIQ EFSLVAKEAA
601: DEAKKLKGKS YSKNDVAAAA KRRELNDRLM LVERGFLDAE GIKGKEWFKH LVYGPAAEPE SKLGFFPGIA DAIAMNASEG IIEHEIWRVA RAIQRASKAL
701: KGGFT
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.