Factsheet for AT5G19740.1

Subcellular Localization

min:

: max

Winner_takes_all: vacuole

Predictor Summary:

endoplasmic reticulum 5
golgi 5
extracellular 5
plastid 2
vacuole 6
plasma membrane 4

Predictors

GFP

MS/MS

Papers

Winner Takes All:	vacuole
Any Predictor:	plastid, secretory
BaCelLo:	endoplasmic reticulum, extracellular, golgi
ChloroP:	plastid
iPSORT:	secretory
MultiLoc:	vacuole
Predotar:	secretory
PProwler:	secretory
TargetP:	secretory
WoLF PSORT:	plastid
YLoc:	vacuole

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDX92505	Canola	plasma membrane, plastid	78.71	80.12
AT4G07670.1	Thale cress	cytosol	32.45	78.93
CDY35864	Canola	plasma membrane, plastid	77.39	78.89
CDY42292	Canola	endoplasmic reticulum, plasma membrane	78.12	78.7
Solyc12g008540.1.1	Tomato	extracellular	8.52	69.05
KRH74232	Soybean	endoplasmic reticulum, plastid	49.34	67.07
PGSC0003DMT400000952	Potato	endoplasmic reticulum, plasma membrane, vacuole	65.35	64.21
Solyc12g008550.1.1	Tomato	cytosol, endoplasmic reticulum, extracellular, golgi, plasma membrane, vacuole	23.49	61.78
KRH74227	Soybean	cytosol	18.06	59.71
VIT_11s0016g03010.t01	Wine grape	cytosol	66.37	58.63
Os01t0740600-01	Rice	cytosol	7.49	58.62
GSMUA_Achr9P06030_001	Banana	endoplasmic reticulum	56.83	57.08
TraesCS3A01G275800.1	Wheat	cytosol, endoplasmic reticulum, plasma membrane	56.83	53.38
Os01t0743300-01	Rice	cytosol, endoplasmic reticulum, plasma membrane	56.83	53.16
EES01459	Sorghum	cytosol, endoplasmic reticulum, peroxisome, plastid	56.39	52.89
CDY44276	Canola	plastid	12.92	52.69
Os01t0740500-00	Rice	plastid	56.09	52.26
TraesCS3B01G309500.4	Wheat	cytosol, endoplasmic reticulum, plasma membrane	56.83	51.6
Zm00001d012765_P005	Maize	extracellular	54.92	51.59
TraesCS3D01G275800.2	Wheat	cytosol, endoplasmic reticulum, plasma membrane	56.68	51.47
TraesCS3B01G311000.1	Wheat	plastid	54.63	51.03
TraesCS3D01G277000.1	Wheat	plastid	54.33	50.75
TraesCS3A01G276800.2	Wheat	plastid	53.74	50.21
Zm00001d043519_P004	Maize	plastid	53.89	50.14
TraesCS3D01G276900.1	Wheat	plastid	54.33	49.6
KXG33331	Sorghum	endoplasmic reticulum, plasma membrane, plastid	53.3	49.59
Os01t0740650-00	Rice	cytosol, mitochondrion, plasma membrane, plastid	32.89	49.56
Zm00001d043517_P002	Maize	mitochondrion	54.04	49.53
TraesCS3D01G275700.1	Wheat	cytosol, endoplasmic reticulum, mitochondrion, nucleus	56.24	49.36
TraesCS3B01G310900.1	Wheat	cytosol	54.33	46.25
TraesCS3A01G276700.1	Wheat	cytosol	53.89	45.76
AT3G54720.1	Thale cress	plastid	41.12	39.72
HORVU5Hr1G103870.2	Barley	mitochondrion	7.2	12.83

Protein Annotations

Gene3D:1.20.930.40	MapMan:19.4.5.7.3	Gene3D:3.40.630.10	Gene3D:3.50.30.30	EntrezGene:832094	ProteinID:AED92744.1
EMBL:AF296838	ArrayExpress:AT5G19740	EnsemblPlantsGene:AT5G19740	RefSeq:AT5G19740	TAIR:AT5G19740	RefSeq:AT5G19740-TAIR-G
EnsemblPlants:AT5G19740.1	TAIR:AT5G19740.1	Unigene:At.31257	EMBL:BT008323	GO:GO:0003674	GO:GO:0003824
GO:GO:0005488	GO:GO:0005575	GO:GO:0005622	GO:GO:0005623	GO:GO:0005737	GO:GO:0005773
GO:GO:0005783	GO:GO:0005789	GO:GO:0006508	GO:GO:0007275	GO:GO:0008150	GO:GO:0008152
GO:GO:0008233	GO:GO:0008237	GO:GO:0010073	GO:GO:0016020	GO:GO:0016021	GO:GO:0016787
GO:GO:0019538	GO:GO:0040007	GO:GO:0040008	GO:GO:0046872	InterPro:IPR036757	MEROPS:M28.A02
RefSeq:NP_197475.2	InterPro:PA_domain	PFAM:PF02225	PFAM:PF04253	PFAM:PF04389	PO:PO:0000293
PANTHER:PTHR10404	PANTHER:PTHR10404:SF45	InterPro:Peptidase_M28	UniProt:Q7Y228	SUPFAM:SSF47672	SUPFAM:SSF52025
SUPFAM:SSF53187	SignalP:SignalP-noTM	InterPro:TFR-like_dimer_dom	InterPro:TFR-like_dimer_dom_sf	TMHMM:TMhelix	UniParc:UPI000019AA01
SEG:seg	:	:	:	:	:

Description

LAMP1Probable glutamate carboxypeptidase LAMP1 [Source:UniProtKB/Swiss-Prot;Acc:Q7Y228]

Coordinates

chr5:+:6673874..6676931

Molecular Weight (calculated)

74743.4 Da

IEP (calculated)

5.167

GRAVY (calculated)

-0.182

Length

681 amino acids

Sequence
(BLAST)

001: MSKSKSLAFV IAALSYSFFS LFSSPPKSHY HELFISTSFS DNASVALNLH TLTRRPHVAG TVANAEAAEY VRSVFTSSAL KSHVVAYQVS LTYPVHRSLV
101: LTPTDSAKPI TFLLEQEKLG DNPYANEVMP TFHGYAKSGN VSGPVVYANY GRVEDFVRLK KDMGVNVSGA VVIARYGQIY RGDIVKNAYE AGAVGVVIYT
201: DKRDYGGDEW FPASKWMPPS GVQVGTVYNG LGDPTTPGWA SVDGCERLSD EAVELSGDVP LIPSLPVSAA DAEVILKTVV GDVSDGDVYP VGPGPGVLNL
301: SYIGETVIAK IENVIGVIEG EEEPDRYVIL GNHRDAWTFG AVDPNSGTAV LMEIAQRLDK LQKRGWKPRR TIILCNWDAE EYGLIGSTEW VEENREMLSS
401: RAVAYLNVDC AVSGPGFHAS ATPQLDELIK VAAQEVRDPD NATQTIYESW IGSSDSVVIR RLGGGGSDYA SFVQHVGVPG VDMSFGRGYP VYHSMYDDFT
501: WMEKFGDPMF QRHVAMASVL GLVALRLADE EIIPFNYTSY ALELKKSAED LENEKLGHNI DVSTLIKSIE DLSTAAKHIS LEKEAIKGAL KVRELNDRLM
601: MAERALTDRD GLSERPWYKH LIYGPSKYDD YGSKSFPGVD DAIDNAKKLN TKASWENVQH QIWRVSRAIR HASLVLKGEL I

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.