Factsheet for Os01t0740500-00

Subcellular Localization

min:

: max

Winner_takes_all: plastid

Predictor Summary:

plastid 5
vacuole 1
mitochondrion 1
endoplasmic reticulum 1
extracellular 1
cytosol 1
golgi 1
plasma membrane 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	plastid
Any Predictor:	cytosol, mitochondrion, plastid, secretory
BaCelLo:	plastid
EpiLoc:	vacuole
iPSORT:	mitochondrion
MultiLoc:	endoplasmic reticulum
Plant-mPloc:	cytosol, extracellular, golgi
Predotar:	plastid
PProwler:	plastid
TargetP:	plastid
WoLF PSORT:	plastid
YLoc:	plasma membrane

PPI

Inferred distinct locusB in Crop

locusB	locations
Os02t0746000-01

Inferred from Arabidopsis experimental PPI

Ath locusA	locusB	Ath locusB	Paper
AT4G07670.1	Os02t0746000-01	AT1G26830.1	15749712
AT4G07670.1	Os02t0746000-01	AT1G69670.1	15749712

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
HORVU0Hr1G020860.1	Barley	cytosol	16.42	90.23
HORVU3Hr1G070540.14	Barley	cytosol, extracellular	40.9	79.31
TraesCS3B01G311000.1	Wheat	plastid	78.39	78.6
Zm00001d043519_P004	Maize	plastid	77.98	77.87
TraesCS3D01G277000.1	Wheat	plastid	77.56	77.78
TraesCS3A01G276800.2	Wheat	plastid	75.79	75.99
KXG33331	Sorghum	endoplasmic reticulum, plasma membrane, plastid	75.24	75.14
HORVU3Hr1G070560.2	Barley	plastid	37.21	73.91
Os01t0743300-01	Rice	cytosol, endoplasmic reticulum, plasma membrane	61.42	61.68
Solyc12g008540.1.1	Tomato	extracellular	6.84	59.52
GSMUA_Achr9P06030_001	Banana	endoplasmic reticulum	53.76	57.96
Os01t0740600-01	Rice	cytosol	6.7	56.32
AT5G19740.1	Thale cress	vacuole	52.26	56.09
HORVU0Hr1G020850.2	Barley	plastid	30.64	56.0
Os01t0740650-00	Rice	cytosol, mitochondrion, plasma membrane, plastid	34.61	55.97
CDX92505	Canola	plasma membrane, plastid	51.16	55.9
KRH74232	Soybean	endoplasmic reticulum, plastid	38.3	55.89
CDY42292	Canola	endoplasmic reticulum, plasma membrane	51.57	55.77
CDY35864	Canola	plasma membrane, plastid	50.48	55.24
PGSC0003DMT400000952	Potato	endoplasmic reticulum, plasma membrane, vacuole	51.85	54.69
AT4G07670.1	Thale cress	cytosol	20.93	54.64
Solyc12g008550.1.1	Tomato	cytosol, endoplasmic reticulum, extracellular, golgi, plasma membrane, vacuole	18.19	51.35
VIT_11s0016g03010.t01	Wine grape	cytosol	53.76	50.97
KRH74227	Soybean	cytosol	14.36	50.97
CDY44276	Canola	plastid	9.03	39.52
Os03t0790600-01	Rice	mitochondrion	39.4	37.31

Protein Annotations

Gene3D:1.20.930.40	MapMan:19.4.5.7.3	Gene3D:3.40.630.10	Gene3D:3.50.30.30	UniProt:A0A0P0V830	ProteinID:BAS74269.1
ncoils:Coil	GO:GO:0003674	GO:GO:0003824	GO:GO:0004180	GO:GO:0006508	GO:GO:0008150
GO:GO:0008152	GO:GO:0016787	GO:GO:0019538	InterPro:IPR036757	EnsemblPlantsGene:Os01g0740500	EnsemblPlants:Os01t0740500-00
InterPro:PA_domain	PFAM:PF02225	PFAM:PF04253	PFAM:PF04389	PANTHER:PTHR10404	PANTHER:PTHR10404:SF45
InterPro:Peptidase_M28	SUPFAM:SSF47672	SUPFAM:SSF52025	SUPFAM:SSF53187	InterPro:TFR-like_dimer_dom	InterPro:TFR-like_dimer_dom_sf
TMHMM:TMhelix	UniParc:UPI000393A3D8	SEG:seg	:	:	:

Description

Similar to glutamate carboxypeptidase 2. (Os01t0740500-00)

Coordinates

chr1:-:30923013..30927457

Molecular Weight (calculated)

79311.4 Da

IEP (calculated)

5.385

GRAVY (calculated)

-0.157

Length

731 amino acids

Sequence
(BLAST)

001: MSRLDATSLL LSPSLTPPHK PTTPRRLICV VSSTLAALGA SLSLLLLVVH SAPAPNYGSL FLSLASNDTA ALHLRALTLH PHVAGTRANS LTAAYVCDAF
101: SSLSIPAHIT PYSVLLSYPV ERSLSLAVPG RATTTSFALS QETYPNDPYA SATAEVMPTF YAYAASGSVS AEAVYANYGR EEDFAYLASR GVDVAGKVAV
201: ARYGRIHCED IVHNARVAGA AAAVVYTDPL QYGGAPGEAW FPDSRWLPPT GVQVGSLFRG VGDPTTPMWA SSEGCERVSV EEAMDTDDMP GIPALPVSAR
301: DAAEIHAALG GDAAPADWQG REGSPVYRLG PGPAILNLTY TGNDTMATIE NVFAVIEGAE EPDRYVILGN HRDAWTFGAS DPNSGTAAMI ELAQRLSVLQ
401: KQGWRPRRTI IFCSWDAEEY GLTGSTEWVE ENREMLSSRA VAYLNVDVSV VGPVFHPSAT PQLDELFQET MKLVQDPDNS SQAVYDSWVK SNISPLIGRL
501: GHGGSDFSAF VQHVGIPSTS MGFGEGKGYP IYHSLYDDFV WMEKFGDPGF SRHAAAASIW GMMALRLADE EILPFNYMSY PVELEAYTKV VENEVRGTAI
601: SCSPLHNAIR ALKTAATKVN GERKELQRQL SSNQLKKDSM KIRSLNDRLM QAERAFTNRE GLFKREWFKH LVYGPSEQND WESASYPGVE NAIASARKEN
701: TTESWKFVQH EIHRVARAIT QASVVLAGSL T

Best Arabidopsis Sequence Match ( AT5G19740.1 )
(BLAST)

001: MSKSKSLAFV IAALSYSFFS LFSSPPKSHY HELFISTSFS DNASVALNLH TLTRRPHVAG TVANAEAAEY VRSVFTSSAL KSHVVAYQVS LTYPVHRSLV
101: LTPTDSAKPI TFLLEQEKLG DNPYANEVMP TFHGYAKSGN VSGPVVYANY GRVEDFVRLK KDMGVNVSGA VVIARYGQIY RGDIVKNAYE AGAVGVVIYT
201: DKRDYGGDEW FPASKWMPPS GVQVGTVYNG LGDPTTPGWA SVDGCERLSD EAVELSGDVP LIPSLPVSAA DAEVILKTVV GDVSDGDVYP VGPGPGVLNL
301: SYIGETVIAK IENVIGVIEG EEEPDRYVIL GNHRDAWTFG AVDPNSGTAV LMEIAQRLDK LQKRGWKPRR TIILCNWDAE EYGLIGSTEW VEENREMLSS
401: RAVAYLNVDC AVSGPGFHAS ATPQLDELIK VAAQEVRDPD NATQTIYESW IGSSDSVVIR RLGGGGSDYA SFVQHVGVPG VDMSFGRGYP VYHSMYDDFT
501: WMEKFGDPMF QRHVAMASVL GLVALRLADE EIIPFNYTSY ALELKKSAED LENEKLGHNI DVSTLIKSIE DLSTAAKHIS LEKEAIKGAL KVRELNDRLM
601: MAERALTDRD GLSERPWYKH LIYGPSKYDD YGSKSFPGVD DAIDNAKKLN TKASWENVQH QIWRVSRAIR HASLVLKGEL I

Arabidopsis Description

LAMP1Probable glutamate carboxypeptidase LAMP1 [Source:UniProtKB/Swiss-Prot;Acc:Q7Y228]
SUBAcon: [vacuole]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.