Subcellular Localization
min:
: max
Winner_takes_all: extracellular, cytosol
Predictor Summary:
Predictor Summary:
- plastid 1
- extracellular 1
- cytosol 1
| Predictors | GFP | MS/MS | Papers | ||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| HORVU0Hr1G020860.1 | Barley | cytosol | 34.75 | 98.5 |
| TraesCS3D01G277000.1 | Wheat | plastid | 95.49 | 49.38 |
| HORVU5Hr1G103900.13 | Barley | cytosol | 43.5 | 41.0 |
| Os01t0740500-00 | Rice | plastid | 79.31 | 40.9 |
| Zm00001d043519_P004 | Maize | plastid | 77.72 | 40.03 |
| KXG33331 | Sorghum | endoplasmic reticulum, plasma membrane, plastid | 75.86 | 39.07 |
| GSMUA_Achr9P06030_001 | Banana | endoplasmic reticulum | 59.68 | 33.19 |
| HORVU3Hr1G070550.5 | Barley | mitochondrion | 58.62 | 29.51 |
| HORVU3Hr1G070790.1 | Barley | peroxisome, plasma membrane | 59.15 | 29.19 |
| HORVU0Hr1G020840.1 | Barley | plastid | 4.51 | 8.72 |
| HORVU0Hr1G020850.2 | Barley | plastid | 3.45 | 3.25 |
| HORVU5Hr1G103870.2 | Barley | mitochondrion | 2.12 | 2.09 |
| HORVU3Hr1G104570.2 | Barley | plastid | 1.59 | 1.99 |
| HORVU3Hr1G080240.1 | Barley | plastid | 1.59 | 1.99 |
| HORVU5Hr1G007810.6 | Barley | endoplasmic reticulum, plasma membrane, plastid | 1.59 | 1.99 |
| HORVU3Hr1G070560.2 | Barley | plastid | 1.59 | 1.63 |
| HORVU6Hr1G029960.1 | Barley | mitochondrion | 0.0 | 0.0 |
Protein Annotations
| EnsemblPlants:HORVU3Hr1G070540.14 | EnsemblPlantsGene:HORVU3Hr1G070540 | Gene3D:1.20.930.40 | Gene3D:3.40.630.10 | InterPro:IPR036757 | InterPro:Peptidase_M28 |
| InterPro:TFR-like_dimer_dom | InterPro:TFR-like_dimer_dom_sf | ncoils:Coil | PANTHER:PTHR10404 | PANTHER:PTHR10404:SF45 | PFAM:PF04253 |
| PFAM:PF04389 | SEG:seg | SUPFAM:SSF47672 | SUPFAM:SSF53187 | UniParc:UPI000B46A6E8 | UniProt:A0A287LJG5 |
| MapMan:19.4.5.7.3 | : | : | : | : | : |
Description
No Description!
Coordinates
chrchr3H:-:533239410..533242325
Molecular Weight (calculated)
42108.8 Da
IEP (calculated)
6.521
GRAVY (calculated)
-0.289
Length
377 amino acids
Sequence
(BLAST)
(BLAST)
001: LMCLLTHLSP YVILGNHRDA WTFGAADPNS GTAAMIELAQ RFSMLQKQGW RPRRTIIFCS WDAEEYGLTG STEWVEENRE MLSSRAVAYL NIDVSVAGPV
101: LLPSATPQLD ELLLETIKLV QDPDNSSQTV YDSWVKSNAS PRIQRLGNGG SDYAAFVQHV GIPSTNLIFG EGPGYPVYHS LYDDFVWVEK FADPGFRRHV
201: AAASIWGIMA LRLADEEIIP FDYMSYTTEL EAYTKVVEKE TEGTAVSCSP LYNSIRALKK AAAKVNSERK DIQRELSSKQ LSKDSMRIRA LNDRLMQAER
301: AFTNREGIFK QAWYKHLIYG PSEQNDWDTA SYPGIADAIA TARRSNTSAS WKLVQHEVHR VARAVAKASA VLSGSLT
101: LLPSATPQLD ELLLETIKLV QDPDNSSQTV YDSWVKSNAS PRIQRLGNGG SDYAAFVQHV GIPSTNLIFG EGPGYPVYHS LYDDFVWVEK FADPGFRRHV
201: AAASIWGIMA LRLADEEIIP FDYMSYTTEL EAYTKVVEKE TEGTAVSCSP LYNSIRALKK AAAKVNSERK DIQRELSSKQ LSKDSMRIRA LNDRLMQAER
301: AFTNREGIFK QAWYKHLIYG PSEQNDWDTA SYPGIADAIA TARRSNTSAS WKLVQHEVHR VARAVAKASA VLSGSLT
001: MSQPLTTRPT VTGISIIPFR QPPPLCSFLF VIVLFVATFY TLHHPDAVTP PLLFSRNAYN ALRLRRLFLS SASNATISSY LRELTRHPHL AGTKPSLDTL
101: HYVFNHFQSL GLETHVAEYE ALLSYPTHIS VTASFSNTTT LEFDLNDVPG DSPVVRPYHA YSPSGSAQGN VVFVNHGEER DYHALESIGV SVKGCVVLAR
201: KGENLGRGAI VKIAEAKGAL GVLIYAENDG GGFGGIERGT VMRGIGDPVS PGWPGVVGGE KLSLDDELVT RRFPKIPSLP LSLRNAEIIL ASLGGARAPL
301: EWRNSGRVGP GQRVGPGRMV INMTFQGEMK MKKINNVVVT IRGSEEADRY VILGNHRDAW TYGAVDPNSG TSALLDISRR FALLLKSGWR PRRTILLCSW
401: DAEEFGMIGS TEWIEENVLN LGASAVAYLN VDCAVQGSGF FAGATPQLDG LLVDVLKLVQ DPDAVGLTVE ETFKSQNNII QRLSRVDSDF SGFLHHAGIP
501: SIDMYYGADY PVYHTAFDSY DWMIHNADPL FHRHVAMAGI WGLLGILLAD EPLIPFDYIS YADQLQAHRD KLSKLLEGKV SVNPLSMAIQ EFSLVAKEAA
601: DEAKKLKGKS YSKNDVAAAA KRRELNDRLM LVERGFLDAE GIKGKEWFKH LVYGPAAEPE SKLGFFPGIA DAIAMNASEG IIEHEIWRVA RAIQRASKAL
701: KGGFT
101: HYVFNHFQSL GLETHVAEYE ALLSYPTHIS VTASFSNTTT LEFDLNDVPG DSPVVRPYHA YSPSGSAQGN VVFVNHGEER DYHALESIGV SVKGCVVLAR
201: KGENLGRGAI VKIAEAKGAL GVLIYAENDG GGFGGIERGT VMRGIGDPVS PGWPGVVGGE KLSLDDELVT RRFPKIPSLP LSLRNAEIIL ASLGGARAPL
301: EWRNSGRVGP GQRVGPGRMV INMTFQGEMK MKKINNVVVT IRGSEEADRY VILGNHRDAW TYGAVDPNSG TSALLDISRR FALLLKSGWR PRRTILLCSW
401: DAEEFGMIGS TEWIEENVLN LGASAVAYLN VDCAVQGSGF FAGATPQLDG LLVDVLKLVQ DPDAVGLTVE ETFKSQNNII QRLSRVDSDF SGFLHHAGIP
501: SIDMYYGADY PVYHTAFDSY DWMIHNADPL FHRHVAMAGI WGLLGILLAD EPLIPFDYIS YADQLQAHRD KLSKLLEGKV SVNPLSMAIQ EFSLVAKEAA
601: DEAKKLKGKS YSKNDVAAAA KRRELNDRLM LVERGFLDAE GIKGKEWFKH LVYGPAAEPE SKLGFFPGIA DAIAMNASEG IIEHEIWRVA RAIQRASKAL
701: KGGFT
Arabidopsis Description
AMP1Probable glutamate carboxypeptidase AMP1 [Source:UniProtKB/Swiss-Prot;Acc:Q9M1S8]
SUBAcon: [plastid]
SUBAcon: [plastid]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.