Subcellular Localization
min:
: max
Winner_takes_all: peroxisome, plasma membrane
Predictor Summary:
Predictor Summary:
- peroxisome 1
- plasma membrane 1
| Predictors | GFP | MS/MS | Papers | ||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| TraesCS3A01G275800.1 | Wheat | cytosol, endoplasmic reticulum, plasma membrane | 88.35 | 93.1 |
| TraesCS3D01G275800.2 | Wheat | cytosol, endoplasmic reticulum, plasma membrane | 89.53 | 91.2 |
| TraesCS3B01G309500.4 | Wheat | cytosol, endoplasmic reticulum, plasma membrane | 88.35 | 90.0 |
| TraesCS3D01G275700.1 | Wheat | cytosol, endoplasmic reticulum, mitochondrion, nucleus | 87.43 | 86.08 |
| Os01t0743300-01 | Rice | cytosol, endoplasmic reticulum, plasma membrane | 77.62 | 81.46 |
| EES01459 | Sorghum | cytosol, endoplasmic reticulum, peroxisome, plastid | 76.44 | 80.44 |
| Zm00001d012765_P005 | Maize | extracellular | 75.0 | 79.03 |
| HORVU0Hr1G020860.1 | Barley | cytosol | 12.43 | 71.43 |
| GSMUA_Achr9P06030_001 | Banana | endoplasmic reticulum | 53.27 | 60.03 |
| HORVU3Hr1G070560.2 | Barley | plastid | 28.66 | 59.51 |
| HORVU3Hr1G070540.14 | Barley | cytosol, extracellular | 29.19 | 59.15 |
| HORVU0Hr1G020840.1 | Barley | plastid | 15.05 | 58.97 |
| HORVU3Hr1G070550.5 | Barley | mitochondrion | 56.41 | 57.54 |
| HORVU0Hr1G020850.2 | Barley | plastid | 23.56 | 45.0 |
| HORVU5Hr1G103900.13 | Barley | cytosol | 21.07 | 40.25 |
| HORVU3Hr1G104570.2 | Barley | plastid | 13.87 | 35.22 |
| HORVU5Hr1G007810.6 | Barley | endoplasmic reticulum, plasma membrane, plastid | 13.74 | 34.77 |
| HORVU6Hr1G029960.1 | Barley | mitochondrion | 8.64 | 34.38 |
| HORVU3Hr1G080240.1 | Barley | plastid | 12.83 | 32.56 |
| HORVU5Hr1G103870.2 | Barley | mitochondrion | 9.29 | 18.59 |
Protein Annotations
| Gene3D:1.20.930.40 | MapMan:19.4.5.7.3 | Gene3D:3.40.630.10 | Gene3D:3.50.30.30 | UniProt:A0A287LJU1 | GO:GO:0005575 |
| GO:GO:0016020 | GO:GO:0016021 | EnsemblPlantsGene:HORVU3Hr1G070790 | EnsemblPlants:HORVU3Hr1G070790.1 | InterPro:IPR036757 | InterPro:PA_domain |
| PFAM:PF02225 | PFAM:PF04253 | PFAM:PF04389 | PANTHER:PTHR10404 | PANTHER:PTHR10404:SF45 | InterPro:Peptidase_M28 |
| SUPFAM:SSF47672 | SUPFAM:SSF52025 | SUPFAM:SSF53187 | InterPro:TFR-like_dimer_dom | InterPro:TFR-like_dimer_dom_sf | TMHMM:TMhelix |
| UniParc:UPI000B47F7E6 | SEG:seg | : | : | : | : |
Description
No Description!
Coordinates
chrchr3H:-:535082451..535087653
Molecular Weight (calculated)
82353.3 Da
IEP (calculated)
5.850
GRAVY (calculated)
-0.193
Length
764 amino acids
Sequence
(BLAST)
(BLAST)
001: AEDRKTPLHS TPAMPHHASR QALPDYPALP LPDAAAMPPP HGEDDSSALK PLIPMDPTPP PPRRATARLH LLPLLVGVLF ATYYHLLVAP AASYYQSLFL
101: SLGSNDTAAA HLRALTVRPH LAGTEANALA ADHVASTLSS LSFPTRVTPY DVLLSYPVSR SLSLSAPGRN ATAFALVQDT YPGDPYAAAS AEVVPTFLAY
201: AASGSAAAEV VYANYGRTED YAYLASRGVN VTGKVALARY GKVYRGDIVK NARDAGAAAA VIFTDAKDYT PGKAFPDGPW MPATGVQVGS TFKGVGDPTT
301: PMWASSEGCE RVSVAEAMAT DDMPGVPALP VSGRDGEAIL RLTGGDVAPK DWQGGDGDGV PVYRLGPGPA VLNLTYTGNE TIATIQNVIS VIEGKEEPDR
401: YVILGNHRDA WTFGAADPNS GTAALLELAQ RLSKLQNKGW RPRRTIILCN WDAEEYGLIG STEWVEENRA MLTSRTVAYL NVDVGVSGSG VDASATPQLD
501: ELLKQASKKV QNPDNGTESL YDMWMASDSS LIGRLGGGGS DYSAFVQHIG IPSVDMAIGT GYAVYHSLYD DFTWMEKYGD PMFRRHVAVA SVWGLVALRL
601: SDEEILPFNY SSYAAELENG AVDISKRILG MPVSLSPLHK SIKQFNTAVL KVDSELQALQ TSKFWSLRRN NPLRMRDLND RLMMTERAFT EREGLSGRPW
701: YKHMIYGPSL YNDYGAEVYP GVDDAIQTAK KTNTSQSWQS VQHEIHRIAR VISQAALVLS GGLT
101: SLGSNDTAAA HLRALTVRPH LAGTEANALA ADHVASTLSS LSFPTRVTPY DVLLSYPVSR SLSLSAPGRN ATAFALVQDT YPGDPYAAAS AEVVPTFLAY
201: AASGSAAAEV VYANYGRTED YAYLASRGVN VTGKVALARY GKVYRGDIVK NARDAGAAAA VIFTDAKDYT PGKAFPDGPW MPATGVQVGS TFKGVGDPTT
301: PMWASSEGCE RVSVAEAMAT DDMPGVPALP VSGRDGEAIL RLTGGDVAPK DWQGGDGDGV PVYRLGPGPA VLNLTYTGNE TIATIQNVIS VIEGKEEPDR
401: YVILGNHRDA WTFGAADPNS GTAALLELAQ RLSKLQNKGW RPRRTIILCN WDAEEYGLIG STEWVEENRA MLTSRTVAYL NVDVGVSGSG VDASATPQLD
501: ELLKQASKKV QNPDNGTESL YDMWMASDSS LIGRLGGGGS DYSAFVQHIG IPSVDMAIGT GYAVYHSLYD DFTWMEKYGD PMFRRHVAVA SVWGLVALRL
601: SDEEILPFNY SSYAAELENG AVDISKRILG MPVSLSPLHK SIKQFNTAVL KVDSELQALQ TSKFWSLRRN NPLRMRDLND RLMMTERAFT EREGLSGRPW
701: YKHMIYGPSL YNDYGAEVYP GVDDAIQTAK KTNTSQSWQS VQHEIHRIAR VISQAALVLS GGLT
001: MSKSKSLAFV IAALSYSFFS LFSSPPKSHY HELFISTSFS DNASVALNLH TLTRRPHVAG TVANAEAAEY VRSVFTSSAL KSHVVAYQVS LTYPVHRSLV
101: LTPTDSAKPI TFLLEQEKLG DNPYANEVMP TFHGYAKSGN VSGPVVYANY GRVEDFVRLK KDMGVNVSGA VVIARYGQIY RGDIVKNAYE AGAVGVVIYT
201: DKRDYGGDEW FPASKWMPPS GVQVGTVYNG LGDPTTPGWA SVDGCERLSD EAVELSGDVP LIPSLPVSAA DAEVILKTVV GDVSDGDVYP VGPGPGVLNL
301: SYIGETVIAK IENVIGVIEG EEEPDRYVIL GNHRDAWTFG AVDPNSGTAV LMEIAQRLDK LQKRGWKPRR TIILCNWDAE EYGLIGSTEW VEENREMLSS
401: RAVAYLNVDC AVSGPGFHAS ATPQLDELIK VAAQEVRDPD NATQTIYESW IGSSDSVVIR RLGGGGSDYA SFVQHVGVPG VDMSFGRGYP VYHSMYDDFT
501: WMEKFGDPMF QRHVAMASVL GLVALRLADE EIIPFNYTSY ALELKKSAED LENEKLGHNI DVSTLIKSIE DLSTAAKHIS LEKEAIKGAL KVRELNDRLM
601: MAERALTDRD GLSERPWYKH LIYGPSKYDD YGSKSFPGVD DAIDNAKKLN TKASWENVQH QIWRVSRAIR HASLVLKGEL I
101: LTPTDSAKPI TFLLEQEKLG DNPYANEVMP TFHGYAKSGN VSGPVVYANY GRVEDFVRLK KDMGVNVSGA VVIARYGQIY RGDIVKNAYE AGAVGVVIYT
201: DKRDYGGDEW FPASKWMPPS GVQVGTVYNG LGDPTTPGWA SVDGCERLSD EAVELSGDVP LIPSLPVSAA DAEVILKTVV GDVSDGDVYP VGPGPGVLNL
301: SYIGETVIAK IENVIGVIEG EEEPDRYVIL GNHRDAWTFG AVDPNSGTAV LMEIAQRLDK LQKRGWKPRR TIILCNWDAE EYGLIGSTEW VEENREMLSS
401: RAVAYLNVDC AVSGPGFHAS ATPQLDELIK VAAQEVRDPD NATQTIYESW IGSSDSVVIR RLGGGGSDYA SFVQHVGVPG VDMSFGRGYP VYHSMYDDFT
501: WMEKFGDPMF QRHVAMASVL GLVALRLADE EIIPFNYTSY ALELKKSAED LENEKLGHNI DVSTLIKSIE DLSTAAKHIS LEKEAIKGAL KVRELNDRLM
601: MAERALTDRD GLSERPWYKH LIYGPSKYDD YGSKSFPGVD DAIDNAKKLN TKASWENVQH QIWRVSRAIR HASLVLKGEL I
Arabidopsis Description
LAMP1Probable glutamate carboxypeptidase LAMP1 [Source:UniProtKB/Swiss-Prot;Acc:Q7Y228]
SUBAcon: [vacuole]
SUBAcon: [vacuole]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.