Factsheet for HORVU5Hr1G007810.6

Subcellular Localization

min:

: max

Winner_takes_all: endoplasmic reticulum, plastid, plasma membrane

Predictor Summary:

plastid 3
endoplasmic reticulum 2
extracellular 1
vacuole 1
plasma membrane 2
golgi 1
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	endoplasmic reticulum, plasma membrane, plastid
Any Predictor:	mitochondrion, plastid, secretory
ChloroP:	plastid
iPSORT:	plastid
MultiLoc:	endoplasmic reticulum
Predotar:	secretory
TargetP:	mitochondrion
WoLF PSORT:	plastid
YLoc:	plasma membrane

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
HORVU3Hr1G104570.2	Barley	plastid	77.15	77.41
HORVU6Hr1G029960.1	Barley	mitochondrion	49.01	77.08
HORVU3Hr1G080240.1	Barley	plastid	76.82	77.08
VIT_11s0065g00570.t01	Wine grape	cytosol	14.24	34.4
TraesCS5D01G435600.1	Wheat	endoplasmic reticulum, plasma membrane, plastid	73.51	31.18
TraesCS5B01G429500.1	Wheat	endoplasmic reticulum, plasma membrane, vacuole	73.18	31.04
TraesCS5A01G427500.1	Wheat	endoplasmic reticulum, plasma membrane	72.85	30.9
CDX76132	Canola	plastid	19.87	30.15
EER93326	Sorghum	plasma membrane, vacuole	70.53	29.96
Zm00001d034383_P003	Maize	plasma membrane, plastid, vacuole	63.58	26.93
Os03t0790600-01	Rice	mitochondrion	67.22	26.3
HORVU3Hr1G070560.2	Barley	plastid	31.79	26.09
HORVU0Hr1G020850.2	Barley	plastid	29.14	22.0
GSMUA_Achr5P02690_001	Banana	mitochondrion	41.72	18.05
KRG96329	Soybean	plasma membrane	39.74	17.24
Solyc11g045250.1.1	Tomato	plastid	32.45	16.7
KRH68064	Soybean	endoplasmic reticulum	37.42	16.28
Bra007091.1-P	Field mustard	plastid	37.75	16.17
KRH32940	Soybean	plastid	36.76	15.97
CDX73456	Canola	plastid	37.09	15.95
AT3G54720.1	Thale cress	plastid	36.42	15.6
CDX78257	Canola	plastid	36.42	15.6
HORVU5Hr1G103870.2	Barley	mitochondrion	18.21	14.4
HORVU0Hr1G020840.1	Barley	plastid	9.27	14.36
Bra014794.1-P	Field mustard	plastid	32.78	14.16
HORVU3Hr1G070790.1	Barley	peroxisome, plasma membrane	34.77	13.74
HORVU3Hr1G070550.5	Barley	mitochondrion	31.46	12.68
VIT_00s0285g00060.t01	Wine grape	cytosol	15.89	12.66
KRH03146	Soybean	mitochondrion	1.99	6.06
CDX76133	Canola	cytosol	8.94	5.83
HORVU0Hr1G020860.1	Barley	cytosol	1.32	3.01
VIT_00s0352g00020.t01	Wine grape	mitochondrion	1.99	2.11
VIT_00s0319g00060.t01	Wine grape	endoplasmic reticulum, plasma membrane	1.99	1.97
VIT_08s0032g00670.t01	Wine grape	cytosol	2.32	1.7
KRH07659	Soybean	cytosol, extracellular, plastid	0.66	1.68
HORVU3Hr1G070540.14	Barley	cytosol, extracellular	1.99	1.59
VIT_00s0327g00020.t01	Wine grape	endoplasmic reticulum, plasma membrane	1.32	1.4
GSMUA_Achr4P31300_001	Banana	cytosol	1.66	1.29
HORVU5Hr1G103900.13	Barley	cytosol	0.99	0.75
Solyc11g045240.1.1	Tomato	cytosol	0.0	0.0

Protein Annotations

EnsemblPlants:HORVU5Hr1G007810.6	EnsemblPlantsGene:HORVU5Hr1G007810	Gene3D:3.40.630.10	Gene3D:3.50.30.30	PANTHER:PTHR10404	PANTHER:PTHR10404:SF63
SEG:seg	SUPFAM:SSF52025	TMHMM:TMhelix	UniParc:UPI000B47EC9A	UniProt:A0A287Q9T9	MapMan:19.4.5.7.3

Description

No Description!

Coordinates

chrchr5H:-:16490072..16490980

Molecular Weight (calculated)

31061.5 Da

IEP (calculated)

11.774

GRAVY (calculated)

0.140

Length

302 amino acids

Sequence
(BLAST)

001: MPHPSSWPSS PRQPLRLARV LLPFGLLLLV SLLVLHGRPP GARSGADPAA LFLSLSPGAN ASIAADLRAL TAGLHLAGTP GAAGVAAHVH ARFRAAGLRT
101: LTREYAPLLS YRAHTSLALL AADRSLLARL STNEPADPDR RVVRPYHAYS PSGAAVAEAV FVNLGREEDL AALDRLGVSL RGRIAVAVRG GGYRGGVVAR
201: AAEKAAVTVL IAGHADGGVE RGAVLLGGPG DPLTPGWAAT DGAERLGFDH EAVRRRFPTI PPMPVSADTA VAIVRSLGGL ALPRAGRPSA RSPYAASRVA
301: TG

Best Arabidopsis Sequence Match ( AT3G54720.1 )
(BLAST)

001: MSQPLTTRPT VTGISIIPFR QPPPLCSFLF VIVLFVATFY TLHHPDAVTP PLLFSRNAYN ALRLRRLFLS SASNATISSY LRELTRHPHL AGTKPSLDTL
101: HYVFNHFQSL GLETHVAEYE ALLSYPTHIS VTASFSNTTT LEFDLNDVPG DSPVVRPYHA YSPSGSAQGN VVFVNHGEER DYHALESIGV SVKGCVVLAR
201: KGENLGRGAI VKIAEAKGAL GVLIYAENDG GGFGGIERGT VMRGIGDPVS PGWPGVVGGE KLSLDDELVT RRFPKIPSLP LSLRNAEIIL ASLGGARAPL
301: EWRNSGRVGP GQRVGPGRMV INMTFQGEMK MKKINNVVVT IRGSEEADRY VILGNHRDAW TYGAVDPNSG TSALLDISRR FALLLKSGWR PRRTILLCSW
401: DAEEFGMIGS TEWIEENVLN LGASAVAYLN VDCAVQGSGF FAGATPQLDG LLVDVLKLVQ DPDAVGLTVE ETFKSQNNII QRLSRVDSDF SGFLHHAGIP
501: SIDMYYGADY PVYHTAFDSY DWMIHNADPL FHRHVAMAGI WGLLGILLAD EPLIPFDYIS YADQLQAHRD KLSKLLEGKV SVNPLSMAIQ EFSLVAKEAA
601: DEAKKLKGKS YSKNDVAAAA KRRELNDRLM LVERGFLDAE GIKGKEWFKH LVYGPAAEPE SKLGFFPGIA DAIAMNASEG IIEHEIWRVA RAIQRASKAL
701: KGGFT

Arabidopsis Description

AMP1Probable glutamate carboxypeptidase AMP1 [Source:UniProtKB/Swiss-Prot;Acc:Q9M1S8]
SUBAcon: [plastid]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.