CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: mitochondrion

Predictor Summary:

plastid 1
mitochondrion 4
nucleus 1
cytosol 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
KRH07659	Soybean	cytosol, extracellular, plastid	46.46	38.66
VIT_00s0327g00020.t01	Wine grape	endoplasmic reticulum, plasma membrane	68.69	23.78
VIT_00s0352g00020.t01	Wine grape	mitochondrion	65.66	22.81
VIT_00s0319g00060.t01	Wine grape	endoplasmic reticulum, plasma membrane	65.66	21.38
VIT_00s0285g00060.t01	Wine grape	cytosol	69.7	18.21
VIT_08s0032g00670.t01	Wine grape	cytosol	65.66	15.78
GSMUA_Achr4P31300_001	Banana	cytosol	57.58	14.65
CDX76133	Canola	cytosol	64.65	13.82
HORVU5Hr1G103900.13	Barley	cytosol	46.46	11.5
Solyc11g045250.1.1	Tomato	plastid	67.68	11.41
KRG96329	Soybean	plasma membrane	78.79	11.21
KRH74232	Soybean	endoplasmic reticulum, plastid	56.57	11.18
KRH68064	Soybean	endoplasmic reticulum	75.76	10.81
KRH32940	Soybean	plastid	69.7	9.93
TraesCS5A01G427500.1	Wheat	endoplasmic reticulum, plasma membrane	65.66	9.13
TraesCS5B01G429500.1	Wheat	endoplasmic reticulum, plasma membrane, vacuole	65.66	9.13
TraesCS5D01G435600.1	Wheat	endoplasmic reticulum, plasma membrane, plastid	65.66	9.13
CDX73456	Canola	plastid	64.65	9.12
Bra007091.1-P	Field mustard	plastid	64.65	9.08
CDX78257	Canola	plastid	64.65	9.08
AT3G54720.1	Thale cress	plastid	64.65	9.08
Bra014794.1-P	Field mustard	plastid	62.63	8.87
EER93326	Sorghum	plasma membrane, vacuole	63.64	8.86
Zm00001d034383_P003	Maize	plasma membrane, plastid, vacuole	63.64	8.84
Os03t0790600-01	Rice	mitochondrion	64.65	8.29
GSMUA_Achr5P02690_001	Banana	mitochondrion	57.58	8.17
HORVU6Hr1G029960.1	Barley	mitochondrion	7.07	3.65
VIT_11s0065g00570.t01	Wine grape	cytosol	4.04	3.2
HORVU3Hr1G104570.2	Barley	plastid	6.06	1.99
HORVU3Hr1G080240.1	Barley	plastid	6.06	1.99
HORVU5Hr1G007810.6	Barley	endoplasmic reticulum, plasma membrane, plastid	6.06	1.99
KRH74227	Soybean	cytosol	0.0	0.0
Solyc11g045240.1.1	Tomato	cytosol	0.0	0.0
CDX76132	Canola	plastid	0.0	0.0

Protein Annotations

EMBL:ACUP02010335	EnsemblPlants:KRH03146	EnsemblPlantsGene:GLYMA_17G079500	Gene3D:3.40.630.10	PANTHER:PTHR10404	PANTHER:PTHR10404:SF63
ProteinID:KRH03146	ProteinID:KRH03146.1	SUPFAM:SSF53187	UniParc:UPI0006EDCC8C	UniProt:A0A0R0FAA7	MapMan:19.4.5.7.3

Description

hypothetical protein

Coordinates

chr17:+:6166818..6168289

Molecular Weight (calculated)

11173.5 Da

IEP (calculated)

8.219

GRAVY (calculated)

-0.006

Length

99 amino acids

Sequence
(BLAST)

1: MAMVKLKLDS VWVKRRWPQN VFAVIKGSEE SDRYVLLGNH RDAWTYGSTE WVEHNLINLG CKAVAYLNVD CAVQGPGFFV GSTPQLDSLI IEVTKKVFS

Best Arabidopsis Sequence Match ( AT3G54720.1 )
(BLAST)

001: MSQPLTTRPT VTGISIIPFR QPPPLCSFLF VIVLFVATFY TLHHPDAVTP PLLFSRNAYN ALRLRRLFLS SASNATISSY LRELTRHPHL AGTKPSLDTL
101: HYVFNHFQSL GLETHVAEYE ALLSYPTHIS VTASFSNTTT LEFDLNDVPG DSPVVRPYHA YSPSGSAQGN VVFVNHGEER DYHALESIGV SVKGCVVLAR
201: KGENLGRGAI VKIAEAKGAL GVLIYAENDG GGFGGIERGT VMRGIGDPVS PGWPGVVGGE KLSLDDELVT RRFPKIPSLP LSLRNAEIIL ASLGGARAPL
301: EWRNSGRVGP GQRVGPGRMV INMTFQGEMK MKKINNVVVT IRGSEEADRY VILGNHRDAW TYGAVDPNSG TSALLDISRR FALLLKSGWR PRRTILLCSW
401: DAEEFGMIGS TEWIEENVLN LGASAVAYLN VDCAVQGSGF FAGATPQLDG LLVDVLKLVQ DPDAVGLTVE ETFKSQNNII QRLSRVDSDF SGFLHHAGIP
501: SIDMYYGADY PVYHTAFDSY DWMIHNADPL FHRHVAMAGI WGLLGILLAD EPLIPFDYIS YADQLQAHRD KLSKLLEGKV SVNPLSMAIQ EFSLVAKEAA
601: DEAKKLKGKS YSKNDVAAAA KRRELNDRLM LVERGFLDAE GIKGKEWFKH LVYGPAAEPE SKLGFFPGIA DAIAMNASEG IIEHEIWRVA RAIQRASKAL
701: KGGFT

Arabidopsis Description

AMP1Probable glutamate carboxypeptidase AMP1 [Source:UniProtKB/Swiss-Prot;Acc:Q9M1S8]
SUBAcon: [plastid]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.