Factsheet for GSMUA_Achr4P31300_001

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 1
vacuole 1
cytosol 3
plastid 1
extracellular 1
mitochondrion 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
VIT_00s0327g00020.t01	Wine grape	endoplasmic reticulum, plasma membrane	43.7	59.44
VIT_08s0032g00670.t01	Wine grape	cytosol	62.47	58.98
VIT_00s0352g00020.t01	Wine grape	mitochondrion	42.67	58.25
KRH03146	Soybean	mitochondrion	14.65	57.58
KRH07659	Soybean	cytosol, extracellular, plastid	17.22	56.3
VIT_00s0319g00060.t01	Wine grape	endoplasmic reticulum, plasma membrane	43.96	56.25
Solyc11g045240.1.1	Tomato	cytosol	11.57	55.56
HORVU5Hr1G103900.13	Barley	cytosol	56.81	55.25
CDX76133	Canola	cytosol	57.58	48.38
VIT_00s0285g00060.t01	Wine grape	cytosol	43.7	44.85
GSMUA_Achr5P02690_001	Banana	mitochondrion	79.95	44.56
KRH32940	Soybean	plastid	60.93	34.1
KRG96329	Soybean	plasma membrane	60.93	34.05
Zm00001d034383_P003	Maize	plasma membrane, plastid, vacuole	62.21	33.94
KRH68064	Soybean	endoplasmic reticulum	60.41	33.86
EER93326	Sorghum	plasma membrane, vacuole	61.44	33.61
TraesCS5D01G435600.1	Wheat	endoplasmic reticulum, plasma membrane, plastid	61.44	33.57
TraesCS5B01G429500.1	Wheat	endoplasmic reticulum, plasma membrane, vacuole	61.18	33.43
TraesCS5A01G427500.1	Wheat	endoplasmic reticulum, plasma membrane	60.41	33.01
Bra007091.1-P	Field mustard	plastid	59.13	32.62
CDX78257	Canola	plastid	59.13	32.62
AT3G54720.1	Thale cress	plastid	58.87	32.48
Bra014794.1-P	Field mustard	plastid	58.1	32.33
CDX73456	Canola	plastid	58.1	32.19
Solyc11g045250.1.1	Tomato	plastid	47.3	31.35
Os03t0790600-01	Rice	mitochondrion	61.95	31.22
GSMUA_Achr9P06030_001	Banana	endoplasmic reticulum	47.3	27.14
HORVU3Hr1G080240.1	Barley	plastid	1.29	1.66
HORVU3Hr1G104570.2	Barley	plastid	1.29	1.66
HORVU5Hr1G007810.6	Barley	endoplasmic reticulum, plasma membrane, plastid	1.29	1.66
CDX76132	Canola	plastid	0.0	0.0
VIT_11s0065g00570.t01	Wine grape	cytosol	0.0	0.0
HORVU6Hr1G029960.1	Barley	mitochondrion	0.0	0.0

Protein Annotations

EnsemblPlants:GSMUA_Achr4P31300_001	EnsemblPlants:GSMUA_Achr4T31300_001	EnsemblPlantsGene:GSMUA_Achr4G31300_001	Gene3D:1.20.930.40	Gene3D:3.40.630.10	InterPro:IPR036757
InterPro:Peptidase_M28	InterPro:TFR-like_dimer_dom	InterPro:TFR-like_dimer_dom_sf	ncoils:Coil	PANTHER:PTHR10404	PANTHER:PTHR10404:SF63
PFAM:PF04253	PFAM:PF04389	SEG:seg	SUPFAM:SSF47672	SUPFAM:SSF53187	UniParc:UPI0002967A73
UniProt:M0STP2	MapMan:19.4.5.7.3	:	:	:	:

Description

Probable glutamate carboxypeptidase 2 [Source:GMGC_GENE;Acc:GSMUA_Achr4G31300_001]

Coordinates

chr4:-:28512660..28530267

Molecular Weight (calculated)

43502.6 Da

IEP (calculated)

5.607

GRAVY (calculated)

-0.227

Length

389 amino acids

Sequence
(BLAST)

001: MVVKEDKKLA KIQNVFGVIR GSEEPDRYVI LGNHRDAWTF GAVDPNSGTA ALLDVARRYG SLLRSGWRPR RTIILCSWDA EEFGMIGSTE WVEQNLGKLT
101: SMAVTYLNVD CAVQGDGFFA GATPQLDKLL VQVTKQIQDP DLEGRTVYDS WAANNEGISI ERLARADSDF SAFLHHAGIP SVDLYYGEAF GGYHTAFDSY
201: KWMIEHGDPS FHRHVAIAEL WGLLGLRLAD DPVLPFDYLS YSTQLHEYAT TLITFLDGGI SVHPLNASVD ELSAAIREAL EEGKKLQEVE TSEEFAALRI
301: RAFNDRLMLA ERGFLEAEGL RRKQWFKHMV YSPPEDSESK MPFFPGIADA ISPARKHAGK GTQLGVQHEI WRVARAIRRV AATLRGELI

Best Arabidopsis Sequence Match ( AT3G54720.1 )
(BLAST)

001: MSQPLTTRPT VTGISIIPFR QPPPLCSFLF VIVLFVATFY TLHHPDAVTP PLLFSRNAYN ALRLRRLFLS SASNATISSY LRELTRHPHL AGTKPSLDTL
101: HYVFNHFQSL GLETHVAEYE ALLSYPTHIS VTASFSNTTT LEFDLNDVPG DSPVVRPYHA YSPSGSAQGN VVFVNHGEER DYHALESIGV SVKGCVVLAR
201: KGENLGRGAI VKIAEAKGAL GVLIYAENDG GGFGGIERGT VMRGIGDPVS PGWPGVVGGE KLSLDDELVT RRFPKIPSLP LSLRNAEIIL ASLGGARAPL
301: EWRNSGRVGP GQRVGPGRMV INMTFQGEMK MKKINNVVVT IRGSEEADRY VILGNHRDAW TYGAVDPNSG TSALLDISRR FALLLKSGWR PRRTILLCSW
401: DAEEFGMIGS TEWIEENVLN LGASAVAYLN VDCAVQGSGF FAGATPQLDG LLVDVLKLVQ DPDAVGLTVE ETFKSQNNII QRLSRVDSDF SGFLHHAGIP
501: SIDMYYGADY PVYHTAFDSY DWMIHNADPL FHRHVAMAGI WGLLGILLAD EPLIPFDYIS YADQLQAHRD KLSKLLEGKV SVNPLSMAIQ EFSLVAKEAA
601: DEAKKLKGKS YSKNDVAAAA KRRELNDRLM LVERGFLDAE GIKGKEWFKH LVYGPAAEPE SKLGFFPGIA DAIAMNASEG IIEHEIWRVA RAIQRASKAL
701: KGGFT

Arabidopsis Description

AMP1Probable glutamate carboxypeptidase AMP1 [Source:UniProtKB/Swiss-Prot;Acc:Q9M1S8]
SUBAcon: [plastid]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.