Factsheet for Os01t0743300-01

Subcellular Localization

min:

: max

Winner_takes_all: endoplasmic reticulum, cytosol, plasma membrane

Predictor Summary:

nucleus 1
vacuole 1
cytosol 1
golgi 1
extracellular 1
mitochondrion 1
endoplasmic reticulum 1
plasma membrane 1

Predictors

GFP

MS/MS

Papers

PPI

Inferred distinct locusB in Crop

locusB	locations
Os02t0746000-01

Inferred from Arabidopsis experimental PPI

Ath locusA	locusB	Ath locusB	Paper
AT4G07670.1	Os02t0746000-01	AT1G26830.1	15749712
AT4G07670.1	Os02t0746000-01	AT1G69670.1	15749712

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
EES01459	Sorghum	cytosol, endoplasmic reticulum, peroxisome, plastid	82.55	82.78
TraesCS3A01G275800.1	Wheat	cytosol, endoplasmic reticulum, plasma membrane	82.14	82.48
Zm00001d012765_P005	Maize	extracellular	80.91	81.24
TraesCS3D01G275800.2	Wheat	cytosol, endoplasmic reticulum, plasma membrane	82.28	79.87
TraesCS3B01G309500.4	Wheat	cytosol, endoplasmic reticulum, plasma membrane	81.46	79.07
HORVU3Hr1G070790.1	Barley	peroxisome, plasma membrane	81.46	77.62
TraesCS3D01G275700.1	Wheat	cytosol, endoplasmic reticulum, mitochondrion, nucleus	80.77	75.77
Solyc12g008540.1.1	Tomato	extracellular	7.14	61.9
GSMUA_Achr9P06030_001	Banana	endoplasmic reticulum	57.55	61.8
Os01t0740500-00	Rice	plastid	61.68	61.42
Os01t0740600-01	Rice	cytosol	7.14	59.77
CDY42292	Canola	endoplasmic reticulum, plasma membrane	53.57	57.69
KRH74232	Soybean	endoplasmic reticulum, plastid	39.56	57.48
CDY35864	Canola	plasma membrane, plastid	52.75	57.48
PGSC0003DMT400000952	Potato	endoplasmic reticulum, plasma membrane, vacuole	54.67	57.43
CDX92505	Canola	plasma membrane, plastid	52.61	57.25
AT5G19740.1	Thale cress	vacuole	53.16	56.83
KRH74227	Soybean	cytosol	15.93	56.31
Solyc12g008550.1.1	Tomato	cytosol, endoplasmic reticulum, extracellular, golgi, plasma membrane, vacuole	19.92	55.98
Os01t0740650-00	Rice	cytosol, mitochondrion, plasma membrane, plastid	33.93	54.65
AT4G07670.1	Thale cress	cytosol	21.02	54.64
VIT_11s0016g03010.t01	Wine grape	cytosol	56.59	53.44
Os03t0790600-01	Rice	mitochondrion	39.97	37.69
CDY44276	Canola	plastid	8.24	35.93

Protein Annotations

Gene3D:1.20.930.40	MapMan:19.4.5.7.3	Gene3D:3.40.630.10	Gene3D:3.50.30.30	EntrezGene:4326550	ProteinID:BAD87907.1
ProteinID:BAF06131.1	ProteinID:BAS74294.1	ncoils:Coil	GO:GO:0003674	GO:GO:0003824	GO:GO:0004180
GO:GO:0006508	GO:GO:0008150	GO:GO:0008152	GO:GO:0016787	GO:GO:0019538	InterPro:IPR036757
MEROPS:M28.A02	EnsemblPlantsGene:Os01g0743300	EnsemblPlants:Os01t0743300-01	InterPro:PA_domain	PFAM:PF02225	PFAM:PF04253
PFAM:PF04389	PANTHER:PTHR10404	PANTHER:PTHR10404:SF45	InterPro:Peptidase_M28	UniProt:Q5JKV3	SUPFAM:SSF47672
SUPFAM:SSF52025	SUPFAM:SSF53187	InterPro:TFR-like_dimer_dom	InterPro:TFR-like_dimer_dom_sf	UniParc:UPI00004C2B00	RefSeq:XP_015614041.1
SEG:seg	:	:	:	:	:

Description

Protease-associated PA domain containing protein. (Os01t0743300-01)

Coordinates

chr1:+:31065153..31069986

Molecular Weight (calculated)

78928.5 Da

IEP (calculated)

5.303

GRAVY (calculated)

-0.154

Length

728 amino acids

Sequence
(BLAST)

001: MPPPPEDDGS SSARTPLIPP TPPPPGRAVA RLHPLPLLVA AAFAASYHLL VAPAPSYYRS LFLSLGSNDT AAAHLHALTL RPHLAGTEAN ARAAEHVVSA
101: LSSLSFPTRV VPYSVLLAYP VHRSLSLSAP GHATTPFALV QDTYPGDPYA AVSAEAVPTF LAYAASGSVA AEAVYANYGR PEDFAYLAAR GVDVTGKVVL
201: ARYGKVYRGD IVINARKAGA AAAVIYTDAK DYAAGEAFPD GPWMPPTGVQ VGSTFKGVGD PTTPMWASSE GCERVSIPEA MATDDMPGIP ALPVSGRDGE
301: AILQLIGGDV APKDWQGGDG SPVYRLGPGP AVLNLTYIGN ETMATIQNVI SVIEGKEEPE RYIILGNHRD AWTFGAVDPN SGTAALLELA QRFSELQKKG
401: WRPRRTIILC NWDAEEYGLV GSTEWVEENR AMLTSRTVAY LNVDSAVYGA GFYASATPQL DELLKEASKQ VQNPDNETQS LYDLWMASDS SSMIKIGRIG
501: GGGSDYSAFV QHIGIPSIDI SMGSEYAVYH SLYDDFVWME KFGDPLFRRH VAAASMWGLV ALRLSDEEIL PFNYSTYAVE LEKGAIDINK RLLGVPVSSS
601: PLQKSIAEFK RAALQMDSEM KALQTRKVWN PWRNNPLKVR DLNERLMMTE RAFTDREGLS GRPWYKHLIY APSLHDDYGA QVYPGVDDAI QMAERTNTSE
701: SWRSVQHEIY RIARVINQAS LVLSGGLT

Best Arabidopsis Sequence Match ( AT5G19740.1 )
(BLAST)

001: MSKSKSLAFV IAALSYSFFS LFSSPPKSHY HELFISTSFS DNASVALNLH TLTRRPHVAG TVANAEAAEY VRSVFTSSAL KSHVVAYQVS LTYPVHRSLV
101: LTPTDSAKPI TFLLEQEKLG DNPYANEVMP TFHGYAKSGN VSGPVVYANY GRVEDFVRLK KDMGVNVSGA VVIARYGQIY RGDIVKNAYE AGAVGVVIYT
201: DKRDYGGDEW FPASKWMPPS GVQVGTVYNG LGDPTTPGWA SVDGCERLSD EAVELSGDVP LIPSLPVSAA DAEVILKTVV GDVSDGDVYP VGPGPGVLNL
301: SYIGETVIAK IENVIGVIEG EEEPDRYVIL GNHRDAWTFG AVDPNSGTAV LMEIAQRLDK LQKRGWKPRR TIILCNWDAE EYGLIGSTEW VEENREMLSS
401: RAVAYLNVDC AVSGPGFHAS ATPQLDELIK VAAQEVRDPD NATQTIYESW IGSSDSVVIR RLGGGGSDYA SFVQHVGVPG VDMSFGRGYP VYHSMYDDFT
501: WMEKFGDPMF QRHVAMASVL GLVALRLADE EIIPFNYTSY ALELKKSAED LENEKLGHNI DVSTLIKSIE DLSTAAKHIS LEKEAIKGAL KVRELNDRLM
601: MAERALTDRD GLSERPWYKH LIYGPSKYDD YGSKSFPGVD DAIDNAKKLN TKASWENVQH QIWRVSRAIR HASLVLKGEL I

Arabidopsis Description

LAMP1Probable glutamate carboxypeptidase LAMP1 [Source:UniProtKB/Swiss-Prot;Acc:Q7Y228]
SUBAcon: [vacuole]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.