Factsheet for GSMUA_Achr7P03700_001

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 2
cytosol 3
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, mitochondrion, nucleus
BaCelLo:	nucleus
MultiLoc:	cytosol
Plant-mPloc:	nucleus
PProwler:	mitochondrion
WoLF PSORT:	cytosol
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
GSMUA_AchrUn_...	Banana	cytosol	94.62	96.84
GSMUA_Achr1P14740_001	Banana	cytosol	95.03	95.03
VIT_05s0020g01320.t01	Wine grape	cytosol	93.01	93.01
KRH37131	Soybean	cytosol, nucleus	90.73	90.73
KRH12127	Soybean	cytosol	90.73	90.73
KRH02236	Soybean	cytosol, nucleus	90.59	90.59
KRH50876	Soybean	endoplasmic reticulum	90.19	90.19
Os01t0369000-01	Rice	cytosol	88.84	88.84
EES00748	Sorghum	cytosol	88.44	88.44
TraesCS1B01G118000.1	Wheat	cytosol	87.9	87.9
HORVU1Hr1G020400.1	Barley	cytosol	87.9	87.79
TraesCS1D01G098500.3	Wheat	cytosol	87.77	87.77
TraesCS1A01G090000.1	Wheat	cytosol	87.63	87.63
EES19028	Sorghum	cytosol	84.95	84.95
PGSC0003DMT400061802	Potato	cytosol	82.8	83.81
Zm00001d010858_P007	Maize	cytosol	84.14	83.58
KRH15695	Soybean	cytosol	40.59	82.74
Os05t0149600-02	Rice	cytosol, plasma membrane	28.76	82.63
TraesCS1D01G098400.2	Wheat	cytosol	82.8	82.57
TraesCS1A01G089900.1	Wheat	cytosol, golgi	82.8	82.57
TraesCS1B01G117900.1	Wheat	cytosol	82.66	82.44
HORVU1Hr1G020390.1	Barley	cytosol	82.53	82.31
Zm00001d024855_P007	Maize	cytosol	83.47	80.13
PGSC0003DMT400029607	Potato	cytosol	79.3	79.84
PGSC0003DMT400023105	Potato	cytosol	58.2	76.37
PGSC0003DMT400023111	Potato	cytosol	74.46	75.07
PGSC0003DMT400022865	Potato	cytosol	73.79	74.69
CDX91291	Canola	nucleus	11.83	72.13
GSMUA_Achr1P26690_001	Banana	cytosol	69.89	69.8
PGSC0003DMT400038140	Potato	cytosol	20.7	67.84
GSMUA_Achr9P17620_001	Banana	cytosol	65.86	66.49
PGSC0003DMT400097727	Potato	cytosol	14.65	63.37
Solyc05g018040.1.1	Tomato	cytosol	21.37	63.35
PGSC0003DMT400085888	Potato	cytosol	9.81	52.9
GSMUA_AchrUn_...	Banana	cytosol	30.11	37.65
GSMUA_Achr8P16990_001	Banana	cytosol	35.22	37.01
GSMUA_AchrUn_...	Banana	cytosol	35.22	37.01
GSMUA_Achr7P18000_001	Banana	cytosol	34.95	36.72
GSMUA_Achr2P07360_001	Banana	mitochondrion	17.74	34.11
GSMUA_Achr4P22850_001	Banana	cytosol	32.53	30.14
GSMUA_Achr7P01270_001	Banana	cytosol	32.26	27.43

Protein Annotations

Gene3D:1.10.10.10	Gene3D:1.10.10.2620	Gene3D:1.20.1310.10	MapMan:19.2.2.8.1.2	ncoils:Coil	InterPro:Cullin_CS
InterPro:Cullin_N	InterPro:Cullin_homology	InterPro:Cullin_homology_sf	InterPro:Cullin_neddylation_domain	InterPro:Cullin_repeat-like_dom_sf	GO:GO:0003674
GO:GO:0005488	GO:GO:0005515	GO:GO:0005575	GO:GO:0005622	GO:GO:0005623	GO:GO:0006511
GO:GO:0008150	GO:GO:0008152	GO:GO:0009056	GO:GO:0009987	GO:GO:0019538	GO:GO:0031461
GO:GO:0031625	EnsemblPlantsGene:GSMUA_Achr7G03700_001	EnsemblPlants:GSMUA_Achr7P03700_001	EnsemblPlants:GSMUA_Achr7T03700_001	InterPro:IPR016158	InterPro:IPR036388
UniProt:M0TEG0	PFAM:PF00888	PFAM:PF10557	ScanProsite:PS01256	PFscan:PS50069	PANTHER:PTHR11932
PANTHER:PTHR11932:SF97	SMART:SM00182	SMART:SM00884	SUPFAM:SSF46785	SUPFAM:SSF74788	SUPFAM:SSF75632
UniParc:UPI000296076C	InterPro:WH-like_DNA-bd_sf	InterPro:WH_DNA-bd_sf	SEG:seg	:	:

Description

Cullin-1 [Source:GMGC_GENE;Acc:GSMUA_Achr7G03700_001]

Coordinates

chr7:-:2922597..2932538

Molecular Weight (calculated)

86930.7 Da

IEP (calculated)

7.234

GRAVY (calculated)

-0.462

Length

744 amino acids

Sequence
(BLAST)

001: MSMHERKTID LEQGWEFMQK GVTKLKNILE GLPEPQFSSE DYMMLYTTIY NMCTQKPPHD YSQQLYDKYR ESFQEYITSM VLPSLREKHD EFMLRELVKR
101: WLNHKVMVRW LSRFFHYLDR YFIARRSLPP LNEVGLTCFR DLVYQEIKGK VKDAVISLID QEREGEQIDR ALLKNVLDIF VEIGLGNMDC YENDFEADLL
201: KDTAAYYSRK ASNWILEDSC PDYMLKAEEC LKREKDRVAH YLHSSSEQKL LEKVQHELLF AYASQLLEKE HSGCHALLRD DKVDDLSRMY RLFCRIPRGL
301: DPVSQIFKQH VTAEGTALVK QAEDAASNKK AEKRDVVGLQ EQVFVRKVIE LHDKYLSYVN DCFQNHSLFH KALKEAFEVF CNKGVAGSSS AELLATFCDN
401: ILKKGGSEKL SDEAIEETLE KVVRLLAYIS DKDLFAEFYR KKLARRLLFD KSANDDHERS ILTKLKQQCG GQFTSKMEGM VTDLTLAREN QSNFEDYLNI
501: NPQANPGIDL TVTVLTTGFW PSYKSFDLNL PAEMVKCVEV FREFYQTKTK HRKLTWIYSL GTCNLIGKFE PKTMELIVTT YQAAALLLFN ASDRLSYSEI
601: MAQLNLTDDD VIRLLHSLSC AKYKILNKEP YTKSISPNDV FEFNSKFSDK MRRIKIPLPP VDEKKKVIED VDKDRRYAID ASIVRIMKSR KVLGHQQLVM
701: ECVEQLGRMF KPDFKAIKKR IEDLITREYL ERDKDNPNLF RYLA

Best Arabidopsis Sequence Match ( AT4G02570.4 )
(BLAST)

001: MERKTIDLEQ GWDYMQTGIT KLKRILEGLN EPAFDSEQYM MLYTTIYNMC TQKPPHDYSQ QLYDKYREAF EEYINSTVLP ALREKHDEFM LRELFKRWSN
101: HKVMVRWLSR FFYYLDRYFI ARRSLPPLNE VGLTCFRDLV YNELHSKVKQ AVIALVDKER EGEQIDRALL KNVLDIYVEI GMGQMERYEE DFESFMLQDT
201: SSYYSRKASS WIQEDSCPDY MLKSEECLKK ERERVAHYLH SSSEPKLVEK VQHELLVVFA SQLLEKEHSG CRALLRDDKV DDLSRMYRLY HKILRGLEPV
301: ANIFKQHVTA EGNALVQQAE DTATNQVANT ASVQEQVLIR KVIELHDKYM VYVTECFQNH TLFHKALKEA FEIFCNKTVA GSSSAELLAT FCDNILKKGG
401: SEKLSDEAIE DTLEKVVKLL AYISDKDLFA EFYRKKLARR LLFDRSANDD HERSILTKLK QQCGGQFTSK MEGMVTDLTL ARENQNSFED YLGSNPAANP
501: GIDLTVTVLT TGFWPSYKSF DINLPSEMIK CVEVFKGFYE TKTKHRKLTW IYSLGTCHIN GKFDQKAIEL IVSTYQAAVL LLFNTTDKLS YTEILAQLNL
601: SHEDLVRLLH SLSCAKYKIL LKEPNTKTVS QNDAFEFNSK FTDRMRRIKI PLPPVDERKK VVEDVDKDRR YAIDAAIVRI MKSRKVLGHQ QLVSECVEQL
701: SRMFKPDIKA IKKRMEDLIT RDYLERDKEN PNMFRYLA

Arabidopsis Description

CUL1AT4G02570 protein [Source:UniProtKB/TrEMBL;Acc:B9DGE3]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.