Factsheet for Zm00001d024855_P007

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

cytosol 3
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, mitochondrion
MultiLoc:	cytosol
PProwler:	mitochondrion
WoLF PSORT:	cytosol
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
EES19028	Sorghum	cytosol	93.42	97.31
Os05t0149600-02	Rice	cytosol, plasma membrane	32.13	96.14
Zm00001d010858_P007	Maize	cytosol	92.77	95.99
TraesCS1D01G098400.2	Wheat	cytosol	87.87	91.29
TraesCS1A01G089900.1	Wheat	cytosol, golgi	87.87	91.29
TraesCS1B01G117900.1	Wheat	cytosol	87.74	91.15
HORVU1Hr1G020390.1	Barley	cytosol	87.23	90.62
GSMUA_AchrUn_...	Banana	cytosol	78.97	84.18
VIT_05s0020g01320.t01	Wine grape	cytosol	80.26	83.6
GSMUA_Achr7P03700_001	Banana	cytosol	80.13	83.47
GSMUA_Achr1P14740_001	Banana	cytosol	79.48	82.8
KRH50876	Soybean	endoplasmic reticulum	79.23	82.53
KRH02236	Soybean	cytosol, nucleus	78.97	82.26
KRH12127	Soybean	cytosol	78.58	81.85
KRH37131	Soybean	cytosol, nucleus	78.45	81.72
PGSC0003DMT400061802	Potato	cytosol	74.32	78.37
PGSC0003DMT400029607	Potato	cytosol	72.9	76.45
KRH15695	Soybean	cytosol	34.19	72.6
PGSC0003DMT400023105	Potato	cytosol	52.9	72.31
PGSC0003DMT400023111	Potato	cytosol	67.87	71.27
PGSC0003DMT400022865	Potato	cytosol	66.97	70.61
CDX91291	Canola	nucleus	11.1	70.49
PGSC0003DMT400097727	Potato	cytosol	14.19	63.95
PGSC0003DMT400038140	Potato	cytosol	18.19	62.11
Solyc05g018040.1.1	Tomato	cytosol	18.84	58.17
PGSC0003DMT400085888	Potato	cytosol	8.39	47.1
Zm00001d049487_P001	Maize	cytosol	32.39	33.96
Zm00001d018043_P001	Maize	cytosol	32.13	33.83
Zm00001d024466_P001	Maize	cytosol	31.23	32.79
Zm00001d042193_P001	Maize	cytosol	11.48	30.48
Zm00001d034361_P001	Maize	cytosol, plastid	29.16	27.16
Zm00001d013116_P002	Maize	plastid	29.42	26.51

Protein Annotations

Gene3D:1.10.10.10	Gene3D:1.10.10.2620	Gene3D:1.20.1310.10	EntrezGene:103641392	MapMan:19.2.2.8.1.2	UniProt:A0A1D6J2B8
ProteinID:AQK42193.1	ProteinID:AQK42195.1	ProteinID:AQK42202.1	ProteinID:AQK42206.1	InterPro:Cullin_CS	InterPro:Cullin_N
InterPro:Cullin_homology	InterPro:Cullin_homology_sf	InterPro:Cullin_neddylation_domain	InterPro:Cullin_repeat-like_dom_sf	GO:GO:0003674	GO:GO:0005488
GO:GO:0005515	GO:GO:0005575	GO:GO:0005622	GO:GO:0005623	GO:GO:0006511	GO:GO:0008150
GO:GO:0008152	GO:GO:0009056	GO:GO:0009987	GO:GO:0019538	GO:GO:0031461	GO:GO:0031625
InterPro:IPR016158	InterPro:IPR036388	PFAM:PF00888	PFAM:PF10557	ScanProsite:PS01256	PFscan:PS50069
PANTHER:PTHR11932	PANTHER:PTHR11932:SF97	SMART:SM00182	SMART:SM00884	SUPFAM:SSF46785	SUPFAM:SSF74788
SUPFAM:SSF75632	UniParc:UPI0008451F5B	InterPro:WH-like_DNA-bd_sf	InterPro:WH_DNA-bd_sf	EnsemblPlantsGene:Zm00001d024855	EnsemblPlants:Zm00001d024855_P007
EnsemblPlants:Zm00001d024855_T007	SEG:seg	:	:	:	:

Description

Cullin-1

Coordinates

chr10:-:90671654..90682705

Molecular Weight (calculated)

90127.3 Da

IEP (calculated)

6.372

GRAVY (calculated)

-0.444

Length

775 amino acids

Sequence
(BLAST)

001: MAGQERRTID LEEGWAFMQK GITKLKNILE GKPEPQFSSE DYMMLYTTIY NMCTQKPPQD YSQQLYDKYR ESFEEYIASM VLPSLREKHD EFMLRELVQR
101: WSNHKVMVRW LSRFFYYLDR YFISRRSLTP LKEVGLTCFR ELIYQEIKGQ VKDAVIALID KEREGEQIDR ALLKNVLDIF VEIGLGQMEC YENDFEDFLL
201: KDTTEYYSVK AQSWILEDSC PDYMIKAEEC LKREKERVGH YLHISSEQKL LEYATPLLEK EHSGCSALLR DDKVEDLSRM YRLFSKISRG LEPISNMFKT
301: HVTSEGTALV KQAEDSASNK KWTSGNGTAS DLQSMKLTDL QCFCVYGFGG AETTQLLMDD WPEKKDMVGM QEQVFVWKII ELHDKYVAYV TECFQGHTLF
401: HKALKEAFEV FCNKGVSGSS NAELLATFCD NILKKGCSEK LSDEAIEDAL EKVVRLLAYI SDKDLFAEFY RKKLARRLLF DKSANDEHER SILTKLKQQC
501: GGQFTSKMEG MVTDLTVARD HQTKFEEFVA GHPELNPGID LAVTVLTTGF WPSYKTFDIN LPAEMVKCVE VFKEFYQTRT KHRKLTWIYS LGTCNINAKF
601: DAKPIELIVT TYQAALLLLF NGSERLSYSE IATQLNLSDD DVVRLLHSLS CAKYKILNKE PANRSISPND VFEFNSKFTD RMRRIKIPLP PVDEKKKVVE
701: DVDKDRRYAI DASIVRIMKS RKVMGHQQLV AECVEQLSRM FKPDFKAIKK RIEDLITRDY LERDKDNANT YKYLA

Best Arabidopsis Sequence Match ( AT1G02980.2 )
(BLAST)

001: MAKKDSVLEA GWSVMEAGVA KLQKILEEVP DEPPFDPVQR MQLYTTVHNL CTQKPPNDYS QQIYDRYGGV YVDYNKQTVL PAIREKHGEY MLRELVKRWA
101: NQKILVRWLS HFFEYLDRFY TRRGSHPTLS AVGFISFRDL VYQELQSKAK DAVLALIHKE REGEQIDRAL LKNVIDVYCG NGMGELVKYE EDFESFLLED
201: SASYYSRNAS RWNQENSCPD YMIKAEESLR LEKERVTNYL HSTTEPKLVA KVQNELLVVV AKQLIENEHS GCRALLRDDK MDDLARMYRL YHPIPQGLDP
301: VADLFKQHIT VEGSALIKQA TEAATDKAAS TSGLKVQDQV LIRQLIDLHD KFMVYVDECF QKHSLFHKAL KEAFEVFCNK TVAGVSSAEI LATYCDNILK
401: TGGGIEKLEN EDLELTLEKV VKLLVYISDK DLFAEFFRKK QARRLLFDRN GNDYHERSLL TKFKELLGAQ FTSKMEGMLT DMTLAKEHQT NFVEFLSVNK
501: TKKLGMDFTV TVLTTGFWPS YKTTDLNLPI EMVNCVEAFK AYYGTKTNSR RLSWIYSLGT CQLAGKFDKK TIEIVVTTYQ AAVLLLFNNT ERLSYTEILE
601: QLNLGHEDLA RLLHSLSCLK YKILIKEPMS RNISNTDTFE FNSKFTDKMR RIRVPLPPMD ERKKIVEDVD KDRRYAIDAA LVRIMKSRKV LGHQQLVSEC
701: VEHLSKMFKP DIKMIKKRIE DLISRDYLER DTDNPNTFKY LA

Arabidopsis Description

CUL2Cullin-2 [Source:UniProtKB/Swiss-Prot;Acc:Q9SRZ0]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.