Factsheet for TraesCS5B01G472600.1

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

cytosol 3
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol
MultiLoc:	cytosol
PProwler:	mitochondrion
WoLF PSORT:	cytosol
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS5B01G472400.1	Wheat	cytosol	65.83	84.84
TraesCS5B01G472500.1	Wheat	cytosol	79.55	80.45
TraesCS5B01G472700.1	Wheat	cytosol	78.71	79.6
TraesCS5B01G472100.1	Wheat	cytosol	78.15	79.04
HORVU5Hr1G110530.1	Barley	cytosol	53.5	77.02
TraesCS5B01G460600.1	Wheat	cytosol	71.43	71.23
TraesCS5B01G460400.1	Wheat	cytosol	69.47	68.32
TraesCS5B01G460300.1	Wheat	cytosol	68.35	67.22
TraesCS2B01G074000.1	Wheat	cytosol	57.98	60.53
Os08t0227400-00	Rice	cytosol	37.53	58.77
KXG24755	Sorghum	mitochondrion	58.54	55.59
EER99574	Sorghum	cytosol	55.74	54.52
EES14736	Sorghum	cytosol	53.78	54.08
EES14737	Sorghum	cytosol	52.66	52.96
TraesCS7B01G049700.1	Wheat	cytosol	52.1	52.25
TraesCS5B01G042100.1	Wheat	cytosol	18.49	51.97
TraesCS3B01G507600.1	Wheat	cytosol	42.3	51.54
KXG24756	Sorghum	cytosol	50.98	51.27
TraesCS2B01G384100.1	Wheat	cytosol	29.13	49.06
TraesCS2B01G383700.1	Wheat	mitochondrion	50.14	48.91
TraesCS2B01G436900.1	Wheat	peroxisome	20.73	48.05
TraesCS2B01G574000.1	Wheat	cytosol, plastid	33.05	47.39
TraesCS2B01G383800.1	Wheat	mitochondrion	47.34	47.34
TraesCS2B01G383900.1	Wheat	mitochondrion	48.74	47.28
TraesCS2B01G573200.1	Wheat	cytosol	43.14	46.53
TraesCS4B01G122200.1	Wheat	cytosol	47.62	46.32
TraesCS3B01G201600.1	Wheat	cytosol	44.26	45.93
TraesCS6B01G303100.1	Wheat	cytosol	46.5	45.73
TraesCS1B01G111900.1	Wheat	mitochondrion, plastid	44.54	45.69
TraesCS3B01G026400.1	Wheat	cytosol	45.38	44.75
TraesCS2B01G573600.1	Wheat	cytosol	40.9	44.65
TraesCS7B01G422200.1	Wheat	cytosol	44.54	44.29
TraesCS5B01G042000.1	Wheat	cytosol	43.14	43.87
TraesCS3B01G060200.1	Wheat	cytosol	44.26	43.65
TraesCS7B01G422800.1	Wheat	cytosol, plastid	44.26	42.82
TraesCS7B01G421900.1	Wheat	cytosol	43.98	42.78
TraesCS3B01G345400.1	Wheat	cytosol	43.42	42.47
TraesCS5B01G042300.1	Wheat	plastid	41.74	42.45
TraesCS3B01G345600.1	Wheat	cytosol, mitochondrion, plastid	43.14	42.42
TraesCS5B01G043200.1	Wheat	plastid	40.62	41.43
TraesCS1B01G387500.1	Wheat	cytosol, plastid	42.3	41.37
TraesCS7B01G211100.1	Wheat	cytosol, plastid	41.46	40.55
TraesCS7B01G422300.1	Wheat	cytosol	41.74	40.49
TraesCS7B01G423000.1	Wheat	cytosol, plastid	41.46	39.89
TraesCS6B01G443900.1	Wheat	cytosol	38.94	39.6
TraesCS7B01G422500.1	Wheat	cytosol	40.34	39.13
TraesCS7B01G422400.1	Wheat	cytosol	40.34	39.13
TraesCS4B01G360400.1	Wheat	cytosol	38.66	38.87
TraesCS2B01G573800.1	Wheat	plastid	29.69	38.27
Os08t0227500-00	Rice	nucleus, plastid	7.56	38.03
TraesCS4B01G360000.1	Wheat	cytosol	37.53	37.43
TraesCS7B01G211200.1	Wheat	cytosol, mitochondrion	40.34	37.21
Zm00001d024349_P001	Maize	cytosol	37.25	37.05
TraesCS3B01G025700.1	Wheat	cytosol	40.06	36.95
TraesCS4B01G392200.1	Wheat	cytosol	35.85	35.65
TraesCS2B01G493600.1	Wheat	cytosol	35.85	35.46
TraesCS2B01G495400.1	Wheat	cytosol	36.13	35.44
TraesCS5B01G364400.1	Wheat	plastid	36.13	35.25
TraesCS2B01G494000.1	Wheat	cytosol	34.17	34.17
TraesCS2B01G492800.1	Wheat	plastid	34.45	34.07
TraesCS2B01G496200.1	Wheat	cytosol	33.33	34.0
TraesCS7B01G211000.1	Wheat	cytosol	30.53	33.96
TraesCS2B01G496300.1	Wheat	cytosol	33.61	33.71
TraesCS2B01G493100.1	Wheat	cytosol	34.73	33.7
TraesCS2B01G496500.1	Wheat	cytosol	32.77	33.43
TraesCS2B01G494600.1	Wheat	cytosol	34.17	33.06
TraesCS2B01G159700.1	Wheat	mitochondrion, plastid	39.22	32.94
TraesCS2B01G496400.1	Wheat	cytosol	32.49	32.86
TraesCS2B01G493500.1	Wheat	cytosol	33.05	32.69
TraesCS2B01G262200.1	Wheat	cytosol	36.69	30.75
TraesCS5B01G431400.2	Wheat	cytosol	35.57	29.06
TraesCS2B01G493700.2	Wheat	cytosol	36.13	25.05

Protein Annotations

Gene3D:1.25.40.420	Gene3D:2.60.210.10	Gene3D:3.30.710.10	MapMan:35.1	InterPro:BPM_C	InterPro:BTB/POZ_dom
GO:GO:0003674	GO:GO:0005488	GO:GO:0005515	InterPro:IPR000210	InterPro:IPR002083	InterPro:IPR008974
InterPro:MATH/TRAF_dom	PFAM:PF00651	PFscan:PS50097	PFscan:PS50144	PANTHER:PTHR26379	PANTHER:PTHR26379:SF179
InterPro:SKP1/BTB/POZ_sf	SMART:SM00225	SUPFAM:SSF49599	SUPFAM:SSF54695	InterPro:TRAF-like	EnsemblPlantsGene:TraesCS5B01G472600
EnsemblPlants:TraesCS5B01G472600.1	TIGR:cd00121	TIGR:cd14736	SEG:seg	:	:

Description

No Description!

Coordinates

chr5B:+:646266713..646267786

Molecular Weight (calculated)

40494.9 Da

IEP (calculated)

6.340

GRAVY (calculated)

-0.102

Length

357 amino acids

Sequence
(BLAST)

001: MKTSKTVSMC TPAEETRGIH VFDILGYSKH RGMGHDLDSH IRSGIFSVDG HDWEINFYPD GFNGFGPFNG HGEDYISVFL VLLSKNTKVR ASCDMRLVDQ
101: YTGFSSSMHK TEPRFFDSCD VTIMAPHTPI FIRRSEIEGS VYLRDDRLTI ECIVTVFKMP HVTQTKSFPK IDMPQADMTE HVSKLLEEKK GFDVCFIVGG
201: ETIEAHRFVL AMRSPVFKAE LYGSMHEARL GQCITIKDMQ PAVFKALLHF IYTDYVPSGE DTEMIRLLLV AADRYAMDRL KLVCQSILCD DLNVDTVATT
301: LALADQHNCH QLKDACLEFI ELSNFMDAVV ATQRLKDLKA TCPSFIVDEL VKRRKFS

Best Arabidopsis Sequence Match ( AT2G39760.1 )
(BLAST)

001: MSTVGGIEQL IPDSVSTSFI ETVNGSHQFT IQGYSLAKGM SPGKFIQSDI FSVGGYDWAI YFYPDGKNPE DQSSYISLFI ALASDSNDIR ALFELTLMDQ
101: SGKGKHKVHS HFDRALEGGP YTLKYKGSMW GYKRFFKRSA LETSDYLKDD CLVINCTVGV VRARLEGPKQ YGIVLPLSNM GQGLKDLLDS EVGCDIAFQV
201: GDETYKAHKL ILAARSPVFR AQFFGPIGNN NVDRIVIDDI EPSIFKAMLS FIYTDVLPNV HEITGSTSAS SFTNMIQHLL AAADLYDLAR LKILCEVLLC
301: EKLDVDNVAT TLALAEQHQF LQLKAFCLEF VASPANLGAV MKSEGFKHLK QSCPTLLSEL LNTVAAADKS STSGQSNKKR SASSVLGCDT TNVRQLRRRT
401: RKEVRAVS

Arabidopsis Description

BPM3BTB/POZ and MATH domain-containing protein 3 [Source:UniProtKB/Swiss-Prot;Acc:O22286]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.