Factsheet for TraesCS3B01G026400.1

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

plastid 2
cytosol 2
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, mitochondrion, plastid
iPSORT:	plastid
MultiLoc:	cytosol
PProwler:	mitochondrion
WoLF PSORT:	plastid
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS3D01G026900.1	Wheat	cytosol	94.48	94.21
TraesCS3B01G060200.1	Wheat	cytosol	92.54	92.54
TraesCS3A01G019700.1	Wheat	cytosol	79.56	79.56
TraesCS3A01G020200.1	Wheat	cytosol	72.93	73.74
TraesCS5B01G042100.1	Wheat	cytosol	25.69	73.23
TraesCS2B01G384100.1	Wheat	cytosol	37.02	63.21
TraesCS3B01G025700.1	Wheat	cytosol	67.13	62.79
TraesCS2B01G574000.1	Wheat	cytosol, plastid	39.78	57.83
TraesCS5B01G042000.1	Wheat	cytosol	55.25	56.98
TraesCS1B01G111900.1	Wheat	mitochondrion, plastid	52.49	54.6
TraesCS2B01G383800.1	Wheat	mitochondrion	53.59	54.34
TraesCS5B01G042300.1	Wheat	plastid	52.49	54.13
TraesCS2B01G383900.1	Wheat	mitochondrion	54.7	53.8
TraesCS6B01G443900.1	Wheat	cytosol	51.93	53.56
TraesCS2B01G383700.1	Wheat	mitochondrion	54.14	53.55
TraesCS2B01G573600.1	Wheat	cytosol	48.34	53.52
TraesCS7B01G421900.1	Wheat	cytosol	53.87	53.13
TraesCS5B01G043200.1	Wheat	plastid	50.55	52.29
TraesCS2B01G573200.1	Wheat	cytosol	47.24	51.66
TraesCS7B01G422800.1	Wheat	cytosol, plastid	50.83	49.86
TraesCS7B01G423000.1	Wheat	cytosol, plastid	50.83	49.6
TraesCS7B01G422200.1	Wheat	cytosol	49.17	49.58
TraesCS2B01G074000.1	Wheat	cytosol	46.41	49.12
TraesCS3B01G345600.1	Wheat	cytosol, mitochondrion, plastid	49.17	49.04
TraesCS3B01G345400.1	Wheat	cytosol	49.17	48.77
TraesCS2B01G436900.1	Wheat	peroxisome	20.72	48.7
TraesCS1B01G387500.1	Wheat	cytosol, plastid	48.9	48.49
TraesCS6B01G303100.1	Wheat	cytosol	48.34	48.21
TraesCS7B01G049700.1	Wheat	cytosol	47.24	48.03
TraesCS3B01G201600.1	Wheat	cytosol	45.58	47.97
TraesCS2B01G573800.1	Wheat	plastid	36.46	47.65
TraesCS5B01G472700.1	Wheat	cytosol	46.13	47.31
TraesCS5B01G460300.1	Wheat	cytosol	46.96	46.83
TraesCS5B01G472100.1	Wheat	cytosol	45.58	46.74
TraesCS5B01G460600.1	Wheat	cytosol	45.58	46.09
TraesCS5B01G472600.1	Wheat	cytosol	44.75	45.38
TraesCS7B01G422300.1	Wheat	cytosol	45.86	45.11
TraesCS5B01G472400.1	Wheat	cytosol	34.25	44.77
TraesCS5B01G472500.1	Wheat	cytosol	43.65	44.76
TraesCS5B01G460400.1	Wheat	cytosol	44.75	44.63
TraesCS7B01G422400.1	Wheat	cytosol	44.75	44.02
TraesCS7B01G422500.1	Wheat	cytosol	44.75	44.02
TraesCS3B01G507600.1	Wheat	cytosol	34.81	43.0
TraesCS4B01G122200.1	Wheat	cytosol	43.37	42.78
TraesCS7B01G211200.1	Wheat	cytosol, mitochondrion	43.65	40.83
TraesCS7B01G211100.1	Wheat	cytosol, plastid	40.61	40.27
TraesCS2B01G493600.1	Wheat	cytosol	38.67	38.78
TraesCS4B01G360000.1	Wheat	cytosol	37.85	38.27
TraesCS4B01G360400.1	Wheat	cytosol	37.29	38.03
TraesCS2B01G496400.1	Wheat	cytosol	37.02	37.96
TraesCS2B01G496300.1	Wheat	cytosol	37.29	37.92
TraesCS2B01G494000.1	Wheat	cytosol	37.29	37.82
TraesCS2B01G492800.1	Wheat	plastid	37.57	37.67
TraesCS2B01G496200.1	Wheat	cytosol	36.19	37.43
TraesCS4B01G392200.1	Wheat	cytosol	37.02	37.33
TraesCS2B01G496500.1	Wheat	cytosol	35.64	36.86
TraesCS2B01G495400.1	Wheat	cytosol	37.02	36.81
TraesCS5B01G364400.1	Wheat	plastid	37.02	36.61
TraesCS2B01G494600.1	Wheat	cytosol	35.64	34.96
TraesCS2B01G493100.1	Wheat	cytosol	35.36	34.78
TraesCS2B01G159700.1	Wheat	mitochondrion, plastid	40.61	34.59
TraesCS2B01G493500.1	Wheat	cytosol	34.25	34.35
TraesCS7B01G211000.1	Wheat	cytosol	29.56	33.33
TraesCS2B01G262200.1	Wheat	cytosol	35.91	30.52
TraesCS5B01G431400.2	Wheat	cytosol	36.19	29.98
TraesCS2B01G493700.2	Wheat	cytosol	36.74	25.83

Protein Annotations

Gene3D:1.25.40.420	Gene3D:2.60.210.10	Gene3D:3.30.710.10	MapMan:35.1	InterPro:BPM_C	InterPro:BTB/POZ_dom
GO:GO:0003674	GO:GO:0005488	GO:GO:0005515	InterPro:IPR000210	InterPro:IPR002083	InterPro:IPR008974
InterPro:MATH/TRAF_dom	PFAM:PF00651	PFAM:PF00917	PFscan:PS50097	PFscan:PS50144	PANTHER:PTHR26379
PANTHER:PTHR26379:SF211	InterPro:SKP1/BTB/POZ_sf	SMART:SM00061	SMART:SM00225	SUPFAM:SSF49599	SUPFAM:SSF54695
InterPro:TRAF-like	EnsemblPlantsGene:TraesCS3B01G026400	EnsemblPlants:TraesCS3B01G026400.1	TIGR:cd00121	TIGR:cd14736	:

Description

No Description!

Coordinates

chr3B:+:11469580..11470668

Molecular Weight (calculated)

40400.5 Da

IEP (calculated)

6.316

GRAVY (calculated)

-0.129

Length

362 amino acids

Sequence
(BLAST)

001: MEQSLPTTVS TCTPDTAMGK HVFKIVGYHL HKGLGVGKYI RSATFAVGGY DWCVRYYPDG YSSPECNGYI SVYLELLSRN AEVRANYTFS LIDSGGGGAQ
101: PWSPFIRRFA HNYTSVDACY GADMFIKQSS LESVPYLRDD TVVIECEVKV IRCPQVQEES VLAASHIEVP PLDLPNHLRK LLDGKRGADV TFEVKGKVFP
201: AHKIMLATRS PVFDAQLYGP MSDANATSRN IIIEDMEPPV FRALLHFIYT DSLPAMDDLD DGENQEMVKH LLVAADRYAM DRMKMICEGI LCKSLDVETV
301: ATTLALADQH HCSKLKDACV EFILSSNRMD DVVASQGYAH LKRSCHALMF DVFERATKSR KI

Best Arabidopsis Sequence Match ( AT2G39760.1 )
(BLAST)

001: MSTVGGIEQL IPDSVSTSFI ETVNGSHQFT IQGYSLAKGM SPGKFIQSDI FSVGGYDWAI YFYPDGKNPE DQSSYISLFI ALASDSNDIR ALFELTLMDQ
101: SGKGKHKVHS HFDRALEGGP YTLKYKGSMW GYKRFFKRSA LETSDYLKDD CLVINCTVGV VRARLEGPKQ YGIVLPLSNM GQGLKDLLDS EVGCDIAFQV
201: GDETYKAHKL ILAARSPVFR AQFFGPIGNN NVDRIVIDDI EPSIFKAMLS FIYTDVLPNV HEITGSTSAS SFTNMIQHLL AAADLYDLAR LKILCEVLLC
301: EKLDVDNVAT TLALAEQHQF LQLKAFCLEF VASPANLGAV MKSEGFKHLK QSCPTLLSEL LNTVAAADKS STSGQSNKKR SASSVLGCDT TNVRQLRRRT
401: RKEVRAVS

Arabidopsis Description

BPM3BTB/POZ and MATH domain-containing protein 3 [Source:UniProtKB/Swiss-Prot;Acc:O22286]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.