Factsheet for TraesCS2B01G494600.1

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

cytosol 3
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, mitochondrion
MultiLoc:	cytosol
PProwler:	mitochondrion
WoLF PSORT:	cytosol
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS2D01G471800.1	Wheat	cytosol	76.42	68.28
TraesCS2A01G471800.1	Wheat	mitochondrion	76.15	62.17
TraesCS5B01G364400.1	Wheat	plastid	54.2	54.64
TraesCS4B01G360400.1	Wheat	cytosol	52.3	54.37
TraesCS4B01G392200.1	Wheat	cytosol	51.76	53.2
TraesCS4B01G360000.1	Wheat	cytosol	51.49	53.07
TraesCS2B01G495400.1	Wheat	cytosol	49.86	50.55
OQU82372	Sorghum	plastid	45.8	49.56
TraesCS2B01G493600.1	Wheat	cytosol	47.15	48.2
TraesCS2B01G492800.1	Wheat	plastid	46.61	47.65
OQU82373	Sorghum	cytosol, plastid	43.63	47.49
TraesCS2B01G494000.1	Wheat	cytosol	45.26	46.78
Os04t0625500-00	Rice	plastid	47.15	46.4
TraesCS2B01G493500.1	Wheat	cytosol	45.26	46.26
TraesCS2B01G493100.1	Wheat	cytosol	45.53	45.65
TraesCS2B01G384100.1	Wheat	cytosol	26.02	45.28
TraesCS2B01G496400.1	Wheat	cytosol	42.01	43.91
Os04t0625400-00	Rice	plastid	38.75	43.33
TraesCS5B01G042100.1	Wheat	cytosol	14.91	43.31
TraesCS2B01G496300.1	Wheat	cytosol	41.46	42.98
TraesCS2B01G496200.1	Wheat	cytosol	40.11	42.29
TraesCS2B01G574000.1	Wheat	cytosol, plastid	28.18	41.77
TraesCS2B01G496500.1	Wheat	cytosol	39.02	41.14
TraesCS2B01G383800.1	Wheat	mitochondrion	39.02	40.34
TraesCS2B01G383900.1	Wheat	mitochondrion	39.84	39.95
TraesCS2B01G436900.1	Wheat	peroxisome	16.53	39.61
EES11459	Sorghum	plastid	40.38	39.11
TraesCS2B01G383700.1	Wheat	mitochondrion	38.75	39.07
TraesCS6B01G303100.1	Wheat	cytosol	37.94	38.57
TraesCS7B01G421900.1	Wheat	cytosol	37.4	37.6
TraesCS2B01G573600.1	Wheat	cytosol	33.06	37.31
TraesCS5B01G460600.1	Wheat	cytosol	36.04	37.15
TraesCS7B01G049700.1	Wheat	cytosol	35.77	37.08
TraesCS5B01G042000.1	Wheat	cytosol	35.23	37.04
TraesCS7B01G422200.1	Wheat	cytosol	35.77	36.77
TraesCS7B01G423000.1	Wheat	cytosol, plastid	36.31	36.12
TraesCS2B01G074000.1	Wheat	cytosol	33.33	35.96
TraesCS2B01G573200.1	Wheat	cytosol	32.25	35.95
TraesCS6B01G443900.1	Wheat	cytosol	34.15	35.9
TraesCS3B01G026400.1	Wheat	cytosol	34.96	35.64
TraesCS5B01G043200.1	Wheat	plastid	33.6	35.43
TraesCS1B01G111900.1	Wheat	mitochondrion, plastid	33.33	35.34
TraesCS7B01G422800.1	Wheat	cytosol, plastid	34.96	34.96
TraesCS3B01G201600.1	Wheat	cytosol	32.52	34.88
TraesCS5B01G472700.1	Wheat	cytosol	33.33	34.84
TraesCS3B01G060200.1	Wheat	cytosol	34.15	34.81
TraesCS5B01G472100.1	Wheat	cytosol	33.06	34.56
TraesCS7B01G211100.1	Wheat	cytosol, plastid	34.15	34.52
TraesCS5B01G042300.1	Wheat	plastid	32.79	34.47
TraesCS3B01G507600.1	Wheat	cytosol	27.37	34.47
TraesCS5B01G460300.1	Wheat	cytosol	33.88	34.44
TraesCS5B01G460400.1	Wheat	cytosol	33.88	34.44
TraesCS5B01G472600.1	Wheat	cytosol	33.06	34.17
TraesCS5B01G472500.1	Wheat	cytosol	32.52	33.99
TraesCS5B01G472400.1	Wheat	cytosol	25.2	33.57
TraesCS3B01G345600.1	Wheat	cytosol, mitochondrion, plastid	32.79	33.33
TraesCS3B01G345400.1	Wheat	cytosol	32.79	33.15
TraesCS7B01G211200.1	Wheat	cytosol, mitochondrion	34.69	33.07
TraesCS4B01G122200.1	Wheat	cytosol	32.52	32.7
TraesCS7B01G422300.1	Wheat	cytosol	32.25	32.34
TraesCS7B01G422500.1	Wheat	cytosol	31.98	32.07
TraesCS1B01G387500.1	Wheat	cytosol, plastid	31.71	32.05
TraesCS2B01G159700.1	Wheat	mitochondrion, plastid	36.86	32.0
TraesCS7B01G422400.1	Wheat	cytosol	31.44	31.52
TraesCS2B01G262200.1	Wheat	cytosol	35.23	30.52
TraesCS2B01G573800.1	Wheat	plastid	22.76	30.32
TraesCS3B01G025700.1	Wheat	cytosol	31.71	30.23
TraesCS7B01G211000.1	Wheat	cytosol	25.75	29.59
TraesCS5B01G431400.2	Wheat	cytosol	34.42	29.06
TraesCS2B01G493700.2	Wheat	cytosol	37.4	26.8

Protein Annotations

Gene3D:1.25.40.420	Gene3D:2.60.210.10	Gene3D:3.30.710.10	MapMan:35.1	InterPro:BPM_C	InterPro:BTB/POZ_dom
GO:GO:0003674	GO:GO:0005488	GO:GO:0005515	InterPro:IPR000210	InterPro:IPR002083	InterPro:IPR008974
InterPro:MATH/TRAF_dom	PFAM:PF00651	PFscan:PS50097	PFscan:PS50144	PANTHER:PTHR26379	PANTHER:PTHR26379:SF224
InterPro:SKP1/BTB/POZ_sf	SMART:SM00061	SMART:SM00225	SUPFAM:SSF49599	SUPFAM:SSF54695	InterPro:TRAF-like
EnsemblPlantsGene:TraesCS2B01G494600	EnsemblPlants:TraesCS2B01G494600.1	TIGR:cd00121	TIGR:cd14736	:	:

Description

No Description!

Coordinates

chr2B:+:691753425..691773013

Molecular Weight (calculated)

40896.7 Da

IEP (calculated)

4.843

GRAVY (calculated)

-0.072

Length

369 amino acids

Sequence
(BLAST)

001: MGNTIGSASL VKQDVPETWS TSLTEGDTAA HSFEVTGFSL LDGMGAGNFI SSSTFCVGGC EWDITFYPDG SKEDGGAHAS AYLRLCNGEL GLQTNYTLSL
101: LGKDGQVFEQ RSLEHTFQSA GIFWGFDDFV QKSKLRRLLS GNDDCVTIRC VLTVLKERHV EEVSTFIVPI PPSNFHQDFG NMLKDGEGTD VTFVVGDQSF
201: QAHRFVLAAR TPFFRAELFG PMKENKMQCI NIDDVEPSVF KALLHFIYID ALPDNRDLKK STTLQHLLVA ADRYGLDRLA AMCEGELCRS IDVQAVATTL
301: TLAKQHCHER LKDICIDFMS SRDVFGDVKK TDGFKHLVTS CPEVISDILQ ENLPLPEVGV IYIRTLFTC

Best Arabidopsis Sequence Match ( AT2G39760.1 )
(BLAST)

001: MSTVGGIEQL IPDSVSTSFI ETVNGSHQFT IQGYSLAKGM SPGKFIQSDI FSVGGYDWAI YFYPDGKNPE DQSSYISLFI ALASDSNDIR ALFELTLMDQ
101: SGKGKHKVHS HFDRALEGGP YTLKYKGSMW GYKRFFKRSA LETSDYLKDD CLVINCTVGV VRARLEGPKQ YGIVLPLSNM GQGLKDLLDS EVGCDIAFQV
201: GDETYKAHKL ILAARSPVFR AQFFGPIGNN NVDRIVIDDI EPSIFKAMLS FIYTDVLPNV HEITGSTSAS SFTNMIQHLL AAADLYDLAR LKILCEVLLC
301: EKLDVDNVAT TLALAEQHQF LQLKAFCLEF VASPANLGAV MKSEGFKHLK QSCPTLLSEL LNTVAAADKS STSGQSNKKR SASSVLGCDT TNVRQLRRRT
401: RKEVRAVS

Arabidopsis Description

BPM3BTB/POZ and MATH domain-containing protein 3 [Source:UniProtKB/Swiss-Prot;Acc:O22286]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.