Factsheet for TraesCS4B01G122200.1

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

cytosol 3
extracellular 1
endoplasmic reticulum 1
vacuole 1
plasma membrane 1
golgi 1
plastid 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, plastid, secretory
MultiLoc:	cytosol
Predotar:	plastid
PProwler:	secretory
WoLF PSORT:	cytosol
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS4A01G193000.1	Wheat	cytosol	91.28	92.54
Os08t0226800-00	Rice	cytosol	55.86	56.47
TraesCS2B01G436900.1	Wheat	peroxisome	22.89	54.55
TraesCS5B01G042100.1	Wheat	cytosol	18.26	52.76
TraesCS6B01G303100.1	Wheat	cytosol	51.5	52.07
TraesCS2B01G384100.1	Wheat	cytosol	29.16	50.47
TraesCS5B01G460300.1	Wheat	cytosol	49.05	49.59
TraesCS5B01G472400.1	Wheat	cytosol	36.51	48.38
TraesCS2B01G383700.1	Wheat	mitochondrion	47.68	47.81
TraesCS2B01G574000.1	Wheat	cytosol, plastid	32.43	47.79
TraesCS5B01G460400.1	Wheat	cytosol	47.14	47.66
TraesCS5B01G472600.1	Wheat	cytosol	46.32	47.62
TraesCS2B01G074000.1	Wheat	cytosol	44.14	47.37
TraesCS1B01G111900.1	Wheat	mitochondrion, plastid	44.69	47.13
TraesCS5B01G472700.1	Wheat	cytosol	44.96	46.74
TraesCS7B01G049700.1	Wheat	cytosol	44.96	46.35
TraesCS5B01G472500.1	Wheat	cytosol	44.41	46.18
TraesCS5B01G472100.1	Wheat	cytosol	44.14	45.89
TraesCS5B01G460600.1	Wheat	cytosol	44.69	45.81
TraesCS2B01G383900.1	Wheat	mitochondrion	45.78	45.65
TraesCS3B01G507600.1	Wheat	cytosol	36.24	45.39
TraesCS2B01G573600.1	Wheat	cytosol	40.33	45.26
TraesCS2B01G573200.1	Wheat	cytosol	40.6	45.02
TraesCS7B01G422200.1	Wheat	cytosol	43.87	44.85
TraesCS2B01G383800.1	Wheat	mitochondrion	43.32	44.54
TraesCS3B01G201600.1	Wheat	cytosol	41.69	44.48
TraesCS7B01G421900.1	Wheat	cytosol	43.87	43.87
TraesCS7B01G423000.1	Wheat	cytosol, plastid	43.87	43.4
TraesCS3B01G060200.1	Wheat	cytosol	42.78	43.37
TraesCS3B01G026400.1	Wheat	cytosol	42.78	43.37
TraesCS5B01G042300.1	Wheat	plastid	40.87	42.73
TraesCS3B01G345600.1	Wheat	cytosol, mitochondrion, plastid	42.23	42.7
TraesCS7B01G422800.1	Wheat	cytosol, plastid	42.78	42.55
TraesCS5B01G042000.1	Wheat	cytosol	40.6	42.45
TraesCS3B01G345400.1	Wheat	cytosol	41.96	42.19
TraesCS1B01G387500.1	Wheat	cytosol, plastid	41.42	41.64
TraesCS6B01G443900.1	Wheat	cytosol	39.51	41.31
TraesCS5B01G043200.1	Wheat	plastid	39.24	41.14
TraesCS7B01G211100.1	Wheat	cytosol, plastid	40.6	40.82
TraesCS2B01G573800.1	Wheat	plastid	30.79	40.79
TraesCS7B01G422300.1	Wheat	cytosol	40.87	40.76
TraesCS7B01G422500.1	Wheat	cytosol	40.33	40.22
TraesCS7B01G422400.1	Wheat	cytosol	40.33	40.22
TraesCS4B01G360000.1	Wheat	cytosol	38.42	39.39
TraesCS7B01G211000.1	Wheat	cytosol	33.52	38.32
TraesCS4B01G360400.1	Wheat	cytosol	37.06	38.31
TraesCS2B01G493600.1	Wheat	cytosol	37.6	38.23
TraesCS4B01G392200.1	Wheat	cytosol	36.51	37.33
TraesCS2B01G492800.1	Wheat	plastid	36.51	37.12
TraesCS2B01G496500.1	Wheat	cytosol	35.15	36.86
TraesCS2B01G493500.1	Wheat	cytosol	36.24	36.84
TraesCS2B01G495400.1	Wheat	cytosol	36.51	36.81
TraesCS2B01G494000.1	Wheat	cytosol	35.69	36.69
TraesCS7B01G211200.1	Wheat	cytosol, mitochondrion	38.15	36.18
TraesCS5B01G364400.1	Wheat	plastid	35.97	36.07
TraesCS3B01G025700.1	Wheat	cytosol	37.33	35.4
TraesCS2B01G496200.1	Wheat	cytosol	33.52	35.14
TraesCS2B01G496300.1	Wheat	cytosol	33.79	34.83
TraesCS2B01G493100.1	Wheat	cytosol	34.6	34.51
TraesCS2B01G496400.1	Wheat	cytosol	32.43	33.71
TraesCS2B01G159700.1	Wheat	mitochondrion, plastid	37.87	32.71
TraesCS2B01G494600.1	Wheat	cytosol	32.7	32.52
TraesCS2B01G262200.1	Wheat	cytosol	35.42	30.52
TraesCS5B01G431400.2	Wheat	cytosol	34.06	28.6
TraesCS2B01G493700.2	Wheat	cytosol	36.24	25.83

Protein Annotations

Gene3D:1.25.40.420	Gene3D:2.60.210.10	Gene3D:3.30.710.10	MapMan:35.1	InterPro:BPM_C	InterPro:BTB/POZ_dom
GO:GO:0003674	GO:GO:0005488	GO:GO:0005515	InterPro:IPR000210	InterPro:IPR002083	InterPro:IPR008974
InterPro:MATH/TRAF_dom	PFAM:PF00651	PFscan:PS50097	PFscan:PS50144	PANTHER:PTHR26379	PANTHER:PTHR26379:SF212
InterPro:SKP1/BTB/POZ_sf	SMART:SM00225	SUPFAM:SSF49599	SUPFAM:SSF54695	InterPro:TRAF-like	EnsemblPlantsGene:TraesCS4B01G122200
EnsemblPlants:TraesCS4B01G122200.1	TIGR:cd00121	TIGR:cd14736	SEG:seg	:	:

Description

No Description!

Coordinates

chr4B:+:145371199..145372302

Molecular Weight (calculated)

40256.3 Da

IEP (calculated)

5.641

GRAVY (calculated)

-0.027

Length

367 amino acids

Sequence
(BLAST)

001: MLLVAGLMAL ESNSSSRCTT ETAKGTHVLE IIGYSLKKGL GIDKFVQSAI FTVGGYDWTI RFYPDGANMS YADCVCVSVS REPTGRGLAR ASCDLRLVNK
101: DTGLPKSIWF LSQATPTEFD YGNRVFPECG GFIERSELEL EASGYIKDDS LTIECVLTVI KQSQVTKTTG SSEIKVSSSN LSDHFGKLLL EGKGSDVTFS
201: VGGKTFAAHK IILVARSHVF EAELYGGMKE TKAESITVED MQPAAFKALL HFVYTDSLPD VGDFGGDDYV EMIRHLLVAA DRYAMDRLKL ICQNILGKNL
301: AMETLATTLA LADHHNCDRL KEVCIEFIAS KDEMDALMAT QGYSNLKRTF PSVLIDVFEK ASRLHKA

Best Arabidopsis Sequence Match ( AT2G39760.1 )
(BLAST)

001: MSTVGGIEQL IPDSVSTSFI ETVNGSHQFT IQGYSLAKGM SPGKFIQSDI FSVGGYDWAI YFYPDGKNPE DQSSYISLFI ALASDSNDIR ALFELTLMDQ
101: SGKGKHKVHS HFDRALEGGP YTLKYKGSMW GYKRFFKRSA LETSDYLKDD CLVINCTVGV VRARLEGPKQ YGIVLPLSNM GQGLKDLLDS EVGCDIAFQV
201: GDETYKAHKL ILAARSPVFR AQFFGPIGNN NVDRIVIDDI EPSIFKAMLS FIYTDVLPNV HEITGSTSAS SFTNMIQHLL AAADLYDLAR LKILCEVLLC
301: EKLDVDNVAT TLALAEQHQF LQLKAFCLEF VASPANLGAV MKSEGFKHLK QSCPTLLSEL LNTVAAADKS STSGQSNKKR SASSVLGCDT TNVRQLRRRT
401: RKEVRAVS

Arabidopsis Description

BPM3BTB/POZ and MATH domain-containing protein 3 [Source:UniProtKB/Swiss-Prot;Acc:O22286]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.