Factsheet for TraesCS4B01G360400.1

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

plastid 3
cytosol 3

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, plastid
iPSORT:	plastid
MultiLoc:	cytosol
PProwler:	plastid
TargetP:	plastid
WoLF PSORT:	cytosol
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS5A01G528600.1	Wheat	cytosol	81.97	81.74
TraesCS4A01G465700.1	Wheat	cytosol	79.44	78.77
TraesCS5A01G528500.1	Wheat	cytosol	69.01	77.29
TraesCS4A01G465200.1	Wheat	cytosol	71.83	75.67
TraesCS3D01G513100.1	Wheat	cytosol, plastid	74.65	75.07
TraesCS4B01G360000.1	Wheat	cytosol	74.37	73.74
TraesCS5B01G364400.1	Wheat	plastid	75.77	73.5
TraesCS4B01G392200.1	Wheat	cytosol	73.8	72.98
OQU82373	Sorghum	cytosol, plastid	52.96	55.46
TraesCS2B01G493600.1	Wheat	cytosol	56.06	55.12
TraesCS2B01G492800.1	Wheat	plastid	55.21	54.29
TraesCS2B01G493500.1	Wheat	cytosol	54.08	53.19
OQU82372	Sorghum	plastid	50.99	53.08
TraesCS2B01G494600.1	Wheat	cytosol	54.37	52.3
TraesCS2B01G493100.1	Wheat	cytosol	54.08	52.17
TraesCS2B01G494000.1	Wheat	cytosol	51.55	51.26
TraesCS2B01G495400.1	Wheat	cytosol	52.11	50.82
Os04t0625500-00	Rice	plastid	53.24	50.4
TraesCS2B01G384100.1	Wheat	cytosol	28.73	48.11
Os04t0625400-00	Rice	plastid	44.51	47.88
TraesCS2B01G496300.1	Wheat	cytosol	47.32	47.19
TraesCS2B01G496200.1	Wheat	cytosol	45.63	46.29
TraesCS2B01G496500.1	Wheat	cytosol	43.1	43.71
TraesCS2B01G496400.1	Wheat	cytosol	43.38	43.63
EES11459	Sorghum	plastid	46.76	43.57
TraesCS5B01G042100.1	Wheat	cytosol	15.49	43.31
TraesCS2B01G436900.1	Wheat	peroxisome	18.31	42.21
TraesCS2B01G074000.1	Wheat	cytosol	40.28	41.81
TraesCS2B01G574000.1	Wheat	cytosol, plastid	29.3	41.77
TraesCS2B01G383800.1	Wheat	mitochondrion	41.97	41.74
TraesCS2B01G383700.1	Wheat	mitochondrion	42.25	40.98
TraesCS2B01G383900.1	Wheat	mitochondrion	42.25	40.76
TraesCS5B01G042000.1	Wheat	cytosol	38.59	39.03
TraesCS7B01G421900.1	Wheat	cytosol	40.28	38.96
TraesCS5B01G472600.1	Wheat	cytosol	38.87	38.66
TraesCS5B01G042300.1	Wheat	plastid	37.75	38.18
TraesCS3B01G201600.1	Wheat	cytosol	36.9	38.08
TraesCS6B01G303100.1	Wheat	cytosol	38.59	37.74
TraesCS2B01G573600.1	Wheat	cytosol	34.65	37.61
TraesCS5B01G460300.1	Wheat	cytosol	38.31	37.47
TraesCS2B01G573200.1	Wheat	cytosol	34.93	37.46
TraesCS1B01G111900.1	Wheat	mitochondrion, plastid	36.62	37.36
TraesCS3B01G026400.1	Wheat	cytosol	38.03	37.29
TraesCS5B01G460600.1	Wheat	cytosol	37.46	37.15
TraesCS5B01G043200.1	Wheat	plastid	36.62	37.14
TraesCS7B01G049700.1	Wheat	cytosol	37.18	37.08
TraesCS4B01G122200.1	Wheat	cytosol	38.31	37.06
TraesCS3B01G060200.1	Wheat	cytosol	37.75	37.02
TraesCS7B01G422800.1	Wheat	cytosol, plastid	38.31	36.86
TraesCS5B01G472700.1	Wheat	cytosol	36.62	36.83
TraesCS5B01G460400.1	Wheat	cytosol	37.46	36.64
TraesCS5B01G472100.1	Wheat	cytosol	36.34	36.54
TraesCS5B01G472500.1	Wheat	cytosol	36.34	36.54
TraesCS6B01G443900.1	Wheat	cytosol	36.06	36.47
TraesCS7B01G422200.1	Wheat	cytosol	36.62	36.21
TraesCS7B01G423000.1	Wheat	cytosol, plastid	37.75	36.12
TraesCS5B01G472400.1	Wheat	cytosol	28.17	36.1
TraesCS1B01G387500.1	Wheat	cytosol, plastid	36.06	35.07
TraesCS3B01G507600.1	Wheat	cytosol	28.73	34.81
TraesCS7B01G211100.1	Wheat	cytosol, plastid	35.77	34.79
TraesCS3B01G345600.1	Wheat	cytosol, mitochondrion, plastid	35.49	34.71
TraesCS7B01G422500.1	Wheat	cytosol	35.49	34.24
TraesCS7B01G422300.1	Wheat	cytosol	35.21	33.97
TraesCS7B01G422400.1	Wheat	cytosol	34.37	33.15
TraesCS3B01G345400.1	Wheat	cytosol	34.08	33.15
TraesCS7B01G211200.1	Wheat	cytosol, mitochondrion	36.06	33.07
TraesCS2B01G159700.1	Wheat	mitochondrion, plastid	39.15	32.71
TraesCS2B01G262200.1	Wheat	cytosol	38.87	32.39
TraesCS2B01G573800.1	Wheat	plastid	24.79	31.77
TraesCS3B01G025700.1	Wheat	cytosol	34.37	31.52
TraesCS2B01G493700.2	Wheat	cytosol	43.94	30.29
TraesCS5B01G431400.2	Wheat	cytosol	36.9	29.98
TraesCS7B01G211000.1	Wheat	cytosol	25.07	27.73

Protein Annotations

Gene3D:1.25.40.420	Gene3D:2.60.210.10	Gene3D:3.30.710.10	MapMan:35.1	InterPro:BPM_C	InterPro:BTB/POZ_dom
GO:GO:0003674	GO:GO:0005488	GO:GO:0005515	InterPro:IPR000210	InterPro:IPR002083	InterPro:IPR008974
InterPro:MATH/TRAF_dom	PFAM:PF00651	PFAM:PF00917	PFscan:PS50097	PFscan:PS50144	PANTHER:PTHR26379
PANTHER:PTHR26379:SF224	InterPro:SKP1/BTB/POZ_sf	SMART:SM00061	SMART:SM00225	SUPFAM:SSF49599	SUPFAM:SSF54695
InterPro:TRAF-like	EnsemblPlantsGene:TraesCS4B01G360400	EnsemblPlants:TraesCS4B01G360400.1	TIGR:cd00121	TIGR:cd14736	SEG:seg

Description

No Description!

Coordinates

chr4B:-:650600613..650601680

Molecular Weight (calculated)

39866.7 Da

IEP (calculated)

6.591

GRAVY (calculated)

-0.235

Length

355 amino acids

Sequence
(BLAST)

001: MANSSSSSVN KPISETSSRC LNECVTAAHN FEVTRYSLLE GMGADKFISS SDFSVDGYDW NIRIYPGGWK EEDNAPYVSA FLNMCSKPTT GVKVKFTLSL
101: LEKDGKVSNL KSETHTFQSN YWGWPKYIEK SKLKELLSRN DDCITIRCVL TVIKEPRTED STTVVSVPQS DLQTHFTNML KDGEGVDVKF NVGGQLFSAH
201: RCVLAARSLV FKAELFGQMK ETTKRRIKID DMEPIIFEAL LHFIYTDSWP SNCDLDQNVE LQHLLVAADR YGLERLKVIC EGKLCQKIDV QTVATTLALA
301: EQHHAAQLKN ACLRYLSSQD VLRAVKETDG FKHIIASCPW IMMDILEKVA PPSGV

Best Arabidopsis Sequence Match ( AT2G39760.1 )
(BLAST)

001: MSTVGGIEQL IPDSVSTSFI ETVNGSHQFT IQGYSLAKGM SPGKFIQSDI FSVGGYDWAI YFYPDGKNPE DQSSYISLFI ALASDSNDIR ALFELTLMDQ
101: SGKGKHKVHS HFDRALEGGP YTLKYKGSMW GYKRFFKRSA LETSDYLKDD CLVINCTVGV VRARLEGPKQ YGIVLPLSNM GQGLKDLLDS EVGCDIAFQV
201: GDETYKAHKL ILAARSPVFR AQFFGPIGNN NVDRIVIDDI EPSIFKAMLS FIYTDVLPNV HEITGSTSAS SFTNMIQHLL AAADLYDLAR LKILCEVLLC
301: EKLDVDNVAT TLALAEQHQF LQLKAFCLEF VASPANLGAV MKSEGFKHLK QSCPTLLSEL LNTVAAADKS STSGQSNKKR SASSVLGCDT TNVRQLRRRT
401: RKEVRAVS

Arabidopsis Description

BPM3BTB/POZ and MATH domain-containing protein 3 [Source:UniProtKB/Swiss-Prot;Acc:O22286]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.