Factsheet for HORVU2Hr1G064920.1

Subcellular Localization

min:

: max

Winner_takes_all: plastid

Predictor Summary:

plastid 2
mitochondrion 1
cytosol 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	plastid
Any Predictor:	cytosol, mitochondrion, plastid
ChloroP:	plastid
iPSORT:	mitochondrion
MultiLoc:	cytosol
TargetP:	plastid

PPI

Inferred distinct locusB in Crop

locusB	locations
HORVU1Hr1G028330.1
HORVU1Hr1G074000.6
HORVU2Hr1G055140.1
HORVU2Hr1G064920.1
HORVU2Hr1G073380.7
HORVU2Hr1G082940.1
HORVU2Hr1G089140.1
HORVU3Hr1G033190.1
HORVU3Hr1G083720.1
HORVU5Hr1G093460.2
HORVU5Hr1G104190.1
HORVU5Hr1G104870.1
HORVU5Hr1G120650.5
HORVU6Hr1G035880.2
HORVU6Hr1G075720.2
HORVU7Hr1G027010.1
HORVU7Hr1G048110.2

Inferred from Arabidopsis experimental PPI

Ath locusA	locusB	Ath locusB	Paper
AT2G39760.1	HORVU6Hr1G075720.2	AT1G26830.1	15618422
AT2G39760.1	HORVU6Hr1G075720.2	AT1G26830.1	15659098
AT2G39760.1	HORVU6Hr1G075720.2	AT1G26830.1	15772280
AT2G39760.1	HORVU6Hr1G035880.2	AT1G52540.1	21798944
AT2G39760.1	HORVU7Hr1G027010.1	AT1G52540.1	21798944
AT2G39760.1	HORVU6Hr1G075720.2	AT1G69670.1	15618422
AT2G39760.1	HORVU6Hr1G075720.2	AT1G69670.1	15659098
AT2G39760.1	HORVU2Hr1G064920.1	AT2G39760.1	15618422
AT2G39760.1	HORVU2Hr1G064920.1	AT2G39760.1	21798944
AT2G39760.1	HORVU5Hr1G120650.5	AT3G23700.1	21798944
AT2G39760.1	HORVU2Hr1G055140.1	AT3G43700.1	15618422
AT2G39760.1	HORVU5Hr1G104190.1	AT3G43700.1	15618422
AT2G39760.1	HORVU7Hr1G048110.2	AT3G54170.1	21798944
AT2G39760.1	HORVU5Hr1G093460.2	AT4G14740.1	21798944
AT2G39760.1	HORVU3Hr1G033190.1	AT4G14900.1	21798944
AT2G39760.1	HORVU5Hr1G104870.1	AT4G14900.1	21798944
AT2G39760.1	HORVU1Hr1G028330.1	AT4G22720.1	21798944
AT2G39760.1	HORVU1Hr1G074000.6	AT5G06270.1	21798944
AT2G39760.1	HORVU2Hr1G073380.7	AT5G06270.1	21798944
AT2G39760.1	HORVU2Hr1G089140.1	AT5G06270.1	21798944
AT2G39760.1	HORVU3Hr1G083720.1	AT5G06270.1	21798944
AT2G39760.1	HORVU2Hr1G082940.1	AT5G14440.1	21798944
AT2G39760.1	HORVU2Hr1G055140.1	AT5G21010.1	15618422
AT2G39760.1	HORVU5Hr1G104190.1	AT5G21010.1	15618422

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS2D01G266900.1	Wheat	cytosol	88.14	95.71
TraesCS2A01G255800.1	Wheat	cytosol	87.67	95.2
Os07t0101400-01	Rice	cytosol	78.37	85.32
EER97813	Sorghum	plastid	74.19	79.35
GSMUA_Achr7P10650_001	Banana	cytosol	62.33	66.17
Zm00001d007888_P002	Maize	plastid	65.35	65.35
VIT_13s0019g02260.t01	Wine grape	cytosol	60.0	63.55
GSMUA_Achr10P...	Banana	cytosol	27.67	62.96
Solyc05g052960.2.1	Tomato	cytosol	57.91	61.03
PGSC0003DMT400069942	Potato	cytosol	57.67	60.78
KRG97837	Soybean	cytosol	56.74	58.94
Bra000147.1-P	Field mustard	cytosol	52.33	58.9
CDX93238	Canola	cytosol	54.19	58.84
KRH31032	Soybean	nucleus	56.74	58.8
Bra017053.1-P	Field mustard	cytosol	54.19	58.4
CDY07031	Canola	cytosol	53.95	58.15
CDY07638	Canola	cytosol	52.56	56.5
AT2G39760.1	Thale cress	cytosol	53.26	56.13
HORVU2Hr1G023850.1	Barley	cytosol, plastid	50.23	55.1
CDY61778	Canola	cytosol	52.56	53.55
HORVU5Hr1G104190.1	Barley	cytosol	49.3	52.48
HORVU2Hr1G055140.1	Barley	cytosol	48.6	45.53
HORVU3Hr1G084920.2	Barley	cytosol	24.65	40.0
HORVU1Hr1G020270.1	Barley	mitochondrion, plastid	32.33	39.83
HORVU2Hr1G106560.1	Barley	plastid	31.63	38.1
HORVU5Hr1G110530.1	Barley	cytosol	21.63	37.5
HORVU5Hr1G108760.1	Barley	cytosol	29.3	36.95
HORVU0Hr1G010120.1	Barley	plastid	30.23	36.83
HORVU5Hr1G089030.1	Barley	cytosol	30.23	36.62
HORVU5Hr1G009850.1	Barley	cytosol	29.77	36.57
HORVU2Hr1G112920.1	Barley	cytosol	29.53	36.18
CDX93236	Canola	cytosol	33.95	35.78
HORVU7Hr1G114550.1	Barley	cytosol, plastid	30.47	35.22
HORVU7Hr1G074420.1	Barley	cytosol	23.49	34.71
HORVU6Hr1G034020.1	Barley	plastid	20.47	34.38
HORVU5Hr1G108800.1	Barley	cytosol	26.05	32.84
HORVU7Hr1G074430.1	Barley	cytosol	26.98	32.49
HORVU5Hr1G009860.1	Barley	cytosol, peroxisome	31.63	30.84
HORVU2Hr1G106750.2	Barley	plastid	33.26	30.17
HORVU6Hr1G069480.1	Barley	plastid	28.84	26.11

Protein Annotations

Gene3D:1.25.40.420	Gene3D:2.60.210.10	Gene3D:3.30.710.10	MapMan:35.1	UniProt:A0A287I814	InterPro:BPM_C
InterPro:BTB/POZ_dom	GO:GO:0003674	GO:GO:0005488	GO:GO:0005515	GO:GO:0005575	GO:GO:0005622
GO:GO:0005623	GO:GO:0005634	GO:GO:0005737	GO:GO:0005829	GO:GO:0006464	GO:GO:0006950
GO:GO:0006970	GO:GO:0008150	GO:GO:0008152	GO:GO:0009628	GO:GO:0009987	GO:GO:0019538
GO:GO:0031396	GO:GO:0042802	GO:GO:0071472	EnsemblPlantsGene:HORVU2Hr1G064920	EnsemblPlants:HORVU2Hr1G064920.1	InterPro:IPR000210
InterPro:IPR002083	InterPro:IPR008974	InterPro:MATH/TRAF_dom	PFAM:PF00651	PFscan:PS50097	PFscan:PS50144
PANTHER:PTHR24411	PANTHER:PTHR24411:SF54	InterPro:SKP1/BTB/POZ_sf	SMART:SM00061	SMART:SM00225	SUPFAM:SSF49599
SUPFAM:SSF54695	InterPro:TRAF-like	UniParc:UPI000B46169D	SEG:seg	:	:

Description

No Description!

Coordinates

chrchr2H:+:442730024..442747802

Molecular Weight (calculated)

47902.1 Da

IEP (calculated)

7.575

GRAVY (calculated)

-0.215

Length

430 amino acids

Sequence
(BLAST)

001: RYQSSYTSHL HFPHSLVVVV IVIDRASPRD QVARRSSALP LLSPPGRXTV RGSHQYTVKG FSLAKGIGPG RHLSSDTFAV GGYDWAVYLY PDGKNQEDNA
101: NYVSVFVALA SEGTDVRALF ELTLLDQSGR ARHKVHSHFD RSMQAGPYTL KYRGSMWGYK RFYRRTQLEA SDFLKDDCLV MNCTVGVVKN RLETPKNIQI
201: NVPPSDIGRY FKELLKLHIG CDITFEVGDE KVQAHKWILA ARSPVFKAQF FGPIGKPDLD RVVVEDVEPI VFKAMVNFIY SDELPSIHEV AGSFSMWTST
301: AVTQHLLAAA DRYGLDRLRI LCEAKLCDEL TSETVATTLA LAEQHHCAQL KSACLKFTAV RQNLGAVMET EGFNYLEETC PSLLSDLLAT VAVVDDDPAS
401: VNRKRGVCIN EDANPVESVE ASDRRTRRRV

Best Arabidopsis Sequence Match ( AT2G39760.1 )
(BLAST)

001: MSTVGGIEQL IPDSVSTSFI ETVNGSHQFT IQGYSLAKGM SPGKFIQSDI FSVGGYDWAI YFYPDGKNPE DQSSYISLFI ALASDSNDIR ALFELTLMDQ
101: SGKGKHKVHS HFDRALEGGP YTLKYKGSMW GYKRFFKRSA LETSDYLKDD CLVINCTVGV VRARLEGPKQ YGIVLPLSNM GQGLKDLLDS EVGCDIAFQV
201: GDETYKAHKL ILAARSPVFR AQFFGPIGNN NVDRIVIDDI EPSIFKAMLS FIYTDVLPNV HEITGSTSAS SFTNMIQHLL AAADLYDLAR LKILCEVLLC
301: EKLDVDNVAT TLALAEQHQF LQLKAFCLEF VASPANLGAV MKSEGFKHLK QSCPTLLSEL LNTVAAADKS STSGQSNKKR SASSVLGCDT TNVRQLRRRT
401: RKEVRAVS

Arabidopsis Description

BPM3BTB/POZ and MATH domain-containing protein 3 [Source:UniProtKB/Swiss-Prot;Acc:O22286]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.