Factsheet for HORVU5Hr1G089030.1

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

plastid 2
cytosol 3

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, plastid
iPSORT:	plastid
MultiLoc:	cytosol
TargetP:	plastid
WoLF PSORT:	cytosol
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS5D01G370700.1	Wheat	cytosol	67.61	86.33
TraesCS5A01G361900.1	Wheat	cytosol	85.35	84.4
TraesCS5B01G364400.1	Wheat	plastid	86.48	83.88
OQU82372	Sorghum	plastid	52.11	54.25
HORVU3Hr1G084920.2	Barley	cytosol	39.72	53.21
OQU82373	Sorghum	cytosol, plastid	49.58	51.92
Os04t0625500-00	Rice	plastid	52.96	50.13
HORVU2Hr1G106560.1	Barley	plastid	48.17	47.9
Os04t0625400-00	Rice	plastid	43.66	46.97
EES11459	Sorghum	plastid	45.92	42.78
HORVU5Hr1G110530.1	Barley	cytosol	27.32	39.11
HORVU2Hr1G106750.2	Barley	plastid	50.42	37.76
HORVU0Hr1G010120.1	Barley	plastid	37.18	37.39
HORVU7Hr1G074430.1	Barley	cytosol	36.62	36.41
HORVU5Hr1G009850.1	Barley	cytosol	35.77	36.29
HORVU2Hr1G112920.1	Barley	cytosol	35.77	36.18
HORVU1Hr1G020270.1	Barley	mitochondrion, plastid	35.49	36.1
HORVU2Hr1G023850.1	Barley	cytosol, plastid	39.15	35.46
HORVU5Hr1G108760.1	Barley	cytosol	33.8	35.19
HORVU7Hr1G114550.1	Barley	cytosol, plastid	36.06	34.41
HORVU6Hr1G034020.1	Barley	plastid	24.51	33.98
HORVU5Hr1G104190.1	Barley	cytosol	37.46	32.92
HORVU7Hr1G074420.1	Barley	cytosol	26.48	32.3
HORVU5Hr1G108800.1	Barley	cytosol	30.42	31.67
HORVU2Hr1G064920.1	Barley	plastid	36.62	30.23
HORVU2Hr1G055140.1	Barley	cytosol	38.31	29.63
HORVU5Hr1G009860.1	Barley	cytosol, peroxisome	35.21	28.34
HORVU6Hr1G069480.1	Barley	plastid	37.75	28.21

Protein Annotations

Gene3D:1.25.40.420	Gene3D:2.60.210.10	Gene3D:3.30.710.10	MapMan:35.1	UniProt:A0A287S758	InterPro:BPM_C
InterPro:BTB/POZ_dom	GO:GO:0003674	GO:GO:0005488	GO:GO:0005515	EnsemblPlantsGene:HORVU5Hr1G089030	EnsemblPlants:HORVU5Hr1G089030.1
InterPro:IPR000210	InterPro:IPR002083	InterPro:IPR008974	InterPro:MATH/TRAF_dom	PFAM:PF00651	PFAM:PF00917
PFscan:PS50097	PFscan:PS50144	PANTHER:PTHR26379	PANTHER:PTHR26379:SF224	InterPro:SKP1/BTB/POZ_sf	SMART:SM00061
SMART:SM00225	SUPFAM:SSF49599	SUPFAM:SSF54695	InterPro:TRAF-like	UniParc:UPI000B483193	:

Description

No Description!

Coordinates

chrchr5H:+:583428759..583429826

Molecular Weight (calculated)

39480.3 Da

IEP (calculated)

6.499

GRAVY (calculated)

-0.071

Length

355 amino acids

Sequence
(BLAST)

001: MANNFTSLVN KPITETSSRC LTESVTTAHN FEVTSYSLLQ GMGARKFISS SKFSNSGYGW NMIIYPDGLH EDTGAYMSAF LCFCSGTTDA KVKYTFSLLE
101: KDGEVNNLES ATYTFKQVGG CWGWGKFIAN SKLKELLSRN GDCFTIRCVL TVVKEPHTED STLIVPVPQS DLHTHFATML KDGEGMDVTF SVHDQLFNAH
201: KCVLAARSYV FKAELFGQMK ETTMKHIKID DMEPSIFEAL LHFIYTDTLP SNCDVDQNVT LQHLLVAADR YGLDRLKAIC EGKLCKRIDV QTVATTLALA
301: EQHQTVQLKN ACLRYLSSQG VLRAVKETDG FRHLTTSCPS IMVDILDIVT PPSVV

Best Arabidopsis Sequence Match ( AT2G39760.1 )
(BLAST)

001: MSTVGGIEQL IPDSVSTSFI ETVNGSHQFT IQGYSLAKGM SPGKFIQSDI FSVGGYDWAI YFYPDGKNPE DQSSYISLFI ALASDSNDIR ALFELTLMDQ
101: SGKGKHKVHS HFDRALEGGP YTLKYKGSMW GYKRFFKRSA LETSDYLKDD CLVINCTVGV VRARLEGPKQ YGIVLPLSNM GQGLKDLLDS EVGCDIAFQV
201: GDETYKAHKL ILAARSPVFR AQFFGPIGNN NVDRIVIDDI EPSIFKAMLS FIYTDVLPNV HEITGSTSAS SFTNMIQHLL AAADLYDLAR LKILCEVLLC
301: EKLDVDNVAT TLALAEQHQF LQLKAFCLEF VASPANLGAV MKSEGFKHLK QSCPTLLSEL LNTVAAADKS STSGQSNKKR SASSVLGCDT TNVRQLRRRT
401: RKEVRAVS

Arabidopsis Description

BPM3BTB/POZ and MATH domain-containing protein 3 [Source:UniProtKB/Swiss-Prot;Acc:O22286]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.