Factsheet for HORVU5Hr1G108760.1

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 2
mitochondrion 2
cytosol 3
plasma membrane 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
HORVU5Hr1G108800.1	Barley	cytosol	90.62	90.62
TraesCS5D01G462100.1	Wheat	cytosol	82.7	78.77
TraesCS5B01G460600.1	Wheat	cytosol	82.7	78.77
TraesCS5A01G451900.1	Wheat	cytosol	81.82	77.72
HORVU5Hr1G110530.1	Barley	cytosol	48.97	67.34
Os08t0227400-00	Rice	cytosol	40.18	60.09
KXG24755	Sorghum	mitochondrion	61.58	55.85
EER99574	Sorghum	cytosol	59.53	55.62
EES14736	Sorghum	cytosol	55.72	53.52
EES14737	Sorghum	cytosol	55.72	53.52
KXG24756	Sorghum	cytosol	53.67	51.55
HORVU1Hr1G020270.1	Barley	mitochondrion, plastid	48.39	47.28
HORVU5Hr1G009850.1	Barley	cytosol	45.16	44.0
HORVU6Hr1G034020.1	Barley	plastid	32.84	43.75
HORVU2Hr1G112920.1	Barley	cytosol	44.28	43.02
HORVU7Hr1G114550.1	Barley	cytosol, plastid	46.33	42.47
HORVU7Hr1G074420.1	Barley	cytosol	35.78	41.92
HORVU0Hr1G010120.1	Barley	plastid	42.82	41.36
HORVU7Hr1G074430.1	Barley	cytosol	43.11	41.18
HORVU3Hr1G084920.2	Barley	cytosol	31.09	40.0
HORVU2Hr1G023850.1	Barley	cytosol, plastid	43.11	37.5
HORVU6Hr1G069480.1	Barley	plastid	48.97	35.16
HORVU2Hr1G106560.1	Barley	plastid	36.36	34.73
HORVU5Hr1G009860.1	Barley	cytosol, peroxisome	44.87	34.69
HORVU5Hr1G089030.1	Barley	cytosol	35.19	33.8
Os08t0227500-00	Rice	nucleus, plastid	7.04	33.8
HORVU5Hr1G104190.1	Barley	cytosol	38.42	32.43
HORVU2Hr1G106750.2	Barley	plastid	41.94	30.17
HORVU2Hr1G055140.1	Barley	cytosol	39.59	29.41
HORVU2Hr1G064920.1	Barley	plastid	36.95	29.3

Protein Annotations

Gene3D:1.25.40.420	Gene3D:2.60.210.10	Gene3D:3.30.710.10	MapMan:35.1	InterPro:BPM_C	InterPro:BTB/POZ_dom
GO:GO:0003674	GO:GO:0005488	GO:GO:0005515	EnsemblPlantsGene:HORVU5Hr1G108760	EnsemblPlants:HORVU5Hr1G108760.1	InterPro:IPR000210
InterPro:IPR002083	InterPro:IPR008974	UniProt:M0X443	InterPro:MATH/TRAF_dom	PFAM:PF00651	PFscan:PS50097
PFscan:PS50144	PANTHER:PTHR26379	PANTHER:PTHR26379:SF179	InterPro:SKP1/BTB/POZ_sf	SMART:SM00225	SUPFAM:SSF49599
SUPFAM:SSF54695	InterPro:TRAF-like	UniParc:UPI000295B3E1	:	:	:

Description

No Description!

Coordinates

chrchr5H:-:628711239..628712261

Molecular Weight (calculated)

38076.7 Da

IEP (calculated)

5.427

GRAVY (calculated)

-0.218

Length

341 amino acids

Sequence
(BLAST)

001: MGACKTASTC SPDEAQGTHV FNILGYSKHR GMGSKHDCYI RSKSFTVGGL DWAIRFYPDG LETQDHISVY LELLSKRTKV RASCDLRLVD QCTGLSSSVH
101: KTGPRLFSFD DSTRFAPQFS ELKKRSEIEG EGSVYLRDDR LTIECMVTVM EKPHVADTKP FPKIDVPPSD MTADVGRLLE EKEGFDVTFI VGGETIEAHR
201: FVLAMRSPVL KAELYGPMRE ARPGQYITIE DMQPAVFKAL LHFIYTDSLP RDTDLEGHKD TDMVQLLLVA ADKYALERLK LVCQSILCEG LNVDTVAMTL
301: ALADQHNCHK LKDACLEFME ISDDMDAVVA TQGFKDLKAT C

Best Arabidopsis Sequence Match ( AT2G39760.1 )
(BLAST)

001: MSTVGGIEQL IPDSVSTSFI ETVNGSHQFT IQGYSLAKGM SPGKFIQSDI FSVGGYDWAI YFYPDGKNPE DQSSYISLFI ALASDSNDIR ALFELTLMDQ
101: SGKGKHKVHS HFDRALEGGP YTLKYKGSMW GYKRFFKRSA LETSDYLKDD CLVINCTVGV VRARLEGPKQ YGIVLPLSNM GQGLKDLLDS EVGCDIAFQV
201: GDETYKAHKL ILAARSPVFR AQFFGPIGNN NVDRIVIDDI EPSIFKAMLS FIYTDVLPNV HEITGSTSAS SFTNMIQHLL AAADLYDLAR LKILCEVLLC
301: EKLDVDNVAT TLALAEQHQF LQLKAFCLEF VASPANLGAV MKSEGFKHLK QSCPTLLSEL LNTVAAADKS STSGQSNKKR SASSVLGCDT TNVRQLRRRT
401: RKEVRAVS

Arabidopsis Description

BPM3BTB/POZ and MATH domain-containing protein 3 [Source:UniProtKB/Swiss-Prot;Acc:O22286]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.