Factsheet for HORVU7Hr1G114550.1

Subcellular Localization

min:

: max

Winner_takes_all: plastid, cytosol

Predictor Summary:

nucleus 2
cytosol 2
plasma membrane 1
mitochondrion 1
plastid 2

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS7B01G422800.1	Wheat	cytosol, plastid	88.98	89.7
HORVU1Hr1G020270.1	Barley	mitochondrion, plastid	49.19	52.44
HORVU5Hr1G009850.1	Barley	cytosol	48.39	51.43
HORVU0Hr1G010120.1	Barley	plastid	46.77	49.29
HORVU2Hr1G112920.1	Barley	cytosol	46.24	49.0
HORVU5Hr1G110530.1	Barley	cytosol	30.91	46.37
HORVU5Hr1G108760.1	Barley	cytosol	42.47	46.33
HORVU3Hr1G084920.2	Barley	cytosol	30.11	42.26
HORVU5Hr1G108800.1	Barley	cytosol	38.44	41.94
HORVU5Hr1G009860.1	Barley	cytosol, peroxisome	47.85	40.36
HORVU7Hr1G074430.1	Barley	cytosol	37.37	38.94
HORVU7Hr1G074420.1	Barley	cytosol	30.11	38.49
HORVU2Hr1G023850.1	Barley	cytosol, plastid	40.32	38.27
HORVU6Hr1G034020.1	Barley	plastid	25.54	37.11
HORVU6Hr1G069480.1	Barley	plastid	46.24	36.21
HORVU5Hr1G089030.1	Barley	cytosol	34.41	36.06
HORVU2Hr1G106560.1	Barley	plastid	33.06	34.45
HORVU5Hr1G104190.1	Barley	cytosol	36.02	33.17
HORVU2Hr1G064920.1	Barley	plastid	35.22	30.47
HORVU2Hr1G106750.2	Barley	plastid	38.17	29.96
HORVU2Hr1G055140.1	Barley	cytosol	35.75	28.98

Protein Annotations

Gene3D:1.25.40.420	Gene3D:2.60.210.10	Gene3D:3.30.710.10	MapMan:35.1	InterPro:BPM_C	InterPro:BTB/POZ_dom
GO:GO:0003674	GO:GO:0005488	GO:GO:0005515	EnsemblPlantsGene:HORVU7Hr1G114550	EnsemblPlants:HORVU7Hr1G114550.1	InterPro:IPR000210
InterPro:IPR002083	InterPro:IPR008974	UniProt:M0VL85	InterPro:MATH/TRAF_dom	PFAM:PF00651	PFscan:PS50097
PFscan:PS50144	PANTHER:PTHR26379	PANTHER:PTHR26379:SF211	InterPro:SKP1/BTB/POZ_sf	SMART:SM00225	SUPFAM:SSF49599
SUPFAM:SSF54695	InterPro:TRAF-like	UniParc:UPI000295C0E7	SEG:seg	:	:

Description

No Description!

Coordinates

chrchr7H:+:639692143..639693261

Molecular Weight (calculated)

41724.8 Da

IEP (calculated)

5.978

GRAVY (calculated)

-0.107

Length

372 amino acids

Sequence
(BLAST)

001: MAAPKSPGIS TISTCTPEKA RGDHVLKIEG YSLCKGLGVG KVIHSAPFAV GGYDWRLSYY PDGYTEATKE LVAVLLELLT KDVEVRALYH LTLIEQAART
101: SPAQLTWPKP TGPVVFRNPA RDALSCLDHS MFVQRSLIEG SAYLYIPDDI LLIKCDITVV KLKEAQMRKI GMSFNIQVPP SDLLQNLRSL LDAREESDVS
201: FKVKDEVFTA HKIILAMRSP VFRAELYGPM KDKCGQGQSI AIEDMEPAVF KALLHFIYTD ELPPMDDLHD DDDEEEMVRH LLVAADRYVM ERMKLMCERK
301: LSEFLDAKTV AATLALADQH HCGKLKDACI GFINSLDRMD DVMDSVGYEH LKRACPAIFI DIWEKAAKAR KM

Best Arabidopsis Sequence Match ( AT2G39760.1 )
(BLAST)

001: MSTVGGIEQL IPDSVSTSFI ETVNGSHQFT IQGYSLAKGM SPGKFIQSDI FSVGGYDWAI YFYPDGKNPE DQSSYISLFI ALASDSNDIR ALFELTLMDQ
101: SGKGKHKVHS HFDRALEGGP YTLKYKGSMW GYKRFFKRSA LETSDYLKDD CLVINCTVGV VRARLEGPKQ YGIVLPLSNM GQGLKDLLDS EVGCDIAFQV
201: GDETYKAHKL ILAARSPVFR AQFFGPIGNN NVDRIVIDDI EPSIFKAMLS FIYTDVLPNV HEITGSTSAS SFTNMIQHLL AAADLYDLAR LKILCEVLLC
301: EKLDVDNVAT TLALAEQHQF LQLKAFCLEF VASPANLGAV MKSEGFKHLK QSCPTLLSEL LNTVAAADKS STSGQSNKKR SASSVLGCDT TNVRQLRRRT
401: RKEVRAVS

Arabidopsis Description

BPM3BTB/POZ and MATH domain-containing protein 3 [Source:UniProtKB/Swiss-Prot;Acc:O22286]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.