Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 4
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| KRH40151 | Soybean | nucleus | 72.41 | 91.7 |
| KRH66562 | Soybean | nucleus | 62.76 | 58.71 |
| CDX71814 | Canola | nucleus | 57.24 | 58.25 |
| KRH48783 | Soybean | nucleus | 62.76 | 57.41 |
| CDY41168 | Canola | nucleus | 57.93 | 56.95 |
| KRH77331 | Soybean | nucleus | 51.72 | 55.97 |
| Bra007530.1-P | Field mustard | nucleus | 58.62 | 54.66 |
| VIT_15s0021g01880.t01 | Wine grape | nucleus | 53.45 | 54.39 |
| Solyc01g090460.2.1 | Tomato | nucleus | 53.45 | 54.2 |
| PGSC0003DMT400066838 | Potato | nucleus | 53.1 | 53.47 |
| AT3G60390.1 | Thale cress | nucleus | 57.93 | 53.33 |
| KRH28155 | Soybean | nucleus | 52.07 | 52.98 |
| AT2G44910.1 | Thale cress | nucleus | 56.9 | 51.89 |
| CDX74693 | Canola | nucleus | 52.41 | 51.53 |
| Bra004874.1-P | Field mustard | nucleus | 52.41 | 51.53 |
| KRH04179 | Soybean | nucleus | 52.76 | 51.17 |
| KRH57467 | Soybean | nucleus | 52.41 | 51.01 |
| CDY27404 | Canola | nucleus | 53.79 | 48.9 |
| Bra040335.1-P | Field mustard | nucleus | 53.45 | 48.29 |
| CDY37015 | Canola | nucleus | 53.45 | 48.29 |
| KRH28314 | Soybean | nucleus | 41.72 | 42.76 |
| KRH50371 | Soybean | nucleus | 31.38 | 42.72 |
| KRH12370 | Soybean | nucleus | 33.1 | 42.48 |
| KRH77172 | Soybean | nucleus | 41.38 | 42.4 |
| KRH02731 | Soybean | nucleus | 30.34 | 42.11 |
| KRG89300 | Soybean | nucleus | 31.72 | 42.01 |
| KRH37372 | Soybean | nucleus | 33.79 | 41.35 |
| KRH19131 | Soybean | nucleus | 30.34 | 41.31 |
| KRH67080 | Soybean | nucleus | 39.31 | 39.58 |
| KRG95402 | Soybean | nucleus, plastid | 38.62 | 38.36 |
| KRH04366 | Soybean | nucleus | 40.34 | 37.5 |
| KRH58171 | Soybean | extracellular, nucleus | 38.62 | 36.72 |
| KRH71831 | Soybean | plastid | 41.38 | 36.47 |
| KRH38083 | Soybean | nucleus | 40.69 | 36.09 |
| KRH43419 | Soybean | nucleus | 43.79 | 33.69 |
| KRH61469 | Soybean | nucleus | 33.1 | 33.1 |
| KRH13873 | Soybean | nucleus | 43.79 | 33.07 |
| KRH15480 | Soybean | nucleus | 34.48 | 32.79 |
| KRG88660 | Soybean | nucleus | 34.14 | 32.04 |
Protein Annotations
| Gene3D:1.10.10.60 | EntrezGene:100819624 | MapMan:15.5.3.1 | UniProt:A0A0R0F4D3 | EMBL:ACUP02011501 | ncoils:Coil |
| EnsemblPlantsGene:GLYMA_18G253800 | GO:GO:0003674 | GO:GO:0003676 | GO:GO:0003677 | GO:GO:0003700 | GO:GO:0005488 |
| GO:GO:0005575 | GO:GO:0005622 | GO:GO:0005623 | GO:GO:0005634 | GO:GO:0006139 | GO:GO:0006355 |
| GO:GO:0008150 | GO:GO:0008152 | GO:GO:0009058 | GO:GO:0009987 | GO:GO:0043565 | InterPro:HD-ZIP_N |
| InterPro:Homeobox-like_sf | InterPro:Homeobox_CS | InterPro:Homeobox_dom | InterPro:IPR001356 | EnsemblPlants:KRH01102 | ProteinID:KRH01102 |
| ProteinID:KRH01102.1 | InterPro:Leu_zip_homeo | PFAM:PF00046 | PFAM:PF02183 | PFAM:PF04618 | ScanProsite:PS00027 |
| PFscan:PS50071 | PANTHER:PTHR24326 | PANTHER:PTHR24326:SF486 | SMART:SM00340 | SMART:SM00389 | SUPFAM:SSF46689 |
| UniParc:UPI0003DEADE4 | SEG:seg | : | : | : | : |
Description
hypothetical protein
Coordinates
chr18:-:54010798..54014934
Molecular Weight (calculated)
32054.6 Da
IEP (calculated)
7.193
GRAVY (calculated)
-0.830
Length
290 amino acids
Sequence
(BLAST)
(BLAST)
001: MGEKDDEFGL SLSLSLGGVN QQQQPPSLNH MHQPQQQQPV PMNHNKTLFG DLFQLPADRS SDMVRGIDVN SAAEYDGVSS PNSAVSSVSG GGKQSERDDD
101: NAAAVAGERT SCSRGSDDDD GGGSDAARKK LRLTKEQSMV LEETFKEHNT LNPKRKQALA EELNLKPRQV EVWFQNRRAR TKLKQTEVDC EYLKKCCENL
201: TEENRRLHKE VQELRALKLS PQMYMHMNPP TTLTMCPSCE RTHSSASSSP ATIHSTVAAA TSSNCKLLGA NIRRPVPVNT WPFEGPIPRP
101: NAAAVAGERT SCSRGSDDDD GGGSDAARKK LRLTKEQSMV LEETFKEHNT LNPKRKQALA EELNLKPRQV EVWFQNRRAR TKLKQTEVDC EYLKKCCENL
201: TEENRRLHKE VQELRALKLS PQMYMHMNPP TTLTMCPSCE RTHSSASSSP ATIHSTVAAA TSSNCKLLGA NIRRPVPVNT WPFEGPIPRP
001: MGERDDGLGL SLSLGNSQQK EPSLRLNLMP LTTSSSSSSF QHMHNQNNNS HPQKIHNISW THLFQSSGIK RTTAERNSDA GSFLRGFNVN RAQSSVAVVD
101: LEEEAAVVSS PNSAVSSLSG NKRDLAVARG GDENEAERAS CSRGGGSGGS DDEDGGNGDG SRKKLRLSKD QALVLEETFK EHSTLNPKQK LALAKQLNLR
201: ARQVEVWFQN RRARTKLKQT EVDCEYLKRC CDNLTEENRR LQKEVSELRA LKLSPHLYMH MTPPTTLTMC PSCERVSSSA ATVTAAPSTT TTPTVVGRPS
301: PQRLTPWTAI SLQQKSGR
101: LEEEAAVVSS PNSAVSSLSG NKRDLAVARG GDENEAERAS CSRGGGSGGS DDEDGGNGDG SRKKLRLSKD QALVLEETFK EHSTLNPKQK LALAKQLNLR
201: ARQVEVWFQN RRARTKLKQT EVDCEYLKRC CDNLTEENRR LQKEVSELRA LKLSPHLYMH MTPPTTLTMC PSCERVSSSA ATVTAAPSTT TTPTVVGRPS
301: PQRLTPWTAI SLQQKSGR
Arabidopsis Description
ATHB-4Uncharacterized protein At2g44910 (Fragment) [Source:UniProtKB/TrEMBL;Acc:C0SV86]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.