Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 6
- mitochondrion 1
- extracellular 1
- endoplasmic reticulum 1
- vacuole 1
- plasma membrane 1
- golgi 1
| Predictors | GFP | MS/MS | Papers |
|---|---|---|---|
PPI
Inferred distinct locusB in Crop
Inferred from Arabidopsis experimental PPI
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| KRH77172 | Soybean | nucleus | 92.23 | 92.23 |
| VIT_00s0732g00010.t01 | Wine grape | nucleus | 69.26 | 69.26 |
| KRH04366 | Soybean | nucleus | 73.85 | 66.99 |
| KRH58171 | Soybean | extracellular, nucleus | 69.26 | 64.26 |
| PGSC0003DMT400055199 | Potato | nucleus | 56.54 | 60.15 |
| Solyc02g091930.2.1 | Tomato | nucleus | 56.54 | 59.7 |
| CDY64220 | Canola | nucleus | 49.47 | 58.09 |
| Solyc02g063520.2.1 | Tomato | nucleus | 51.24 | 57.54 |
| AT4G37790.1 | Thale cress | nucleus | 56.18 | 57.19 |
| PGSC0003DMT400026968 | Potato | nucleus | 51.24 | 57.09 |
| CDX69330 | Canola | nucleus | 56.54 | 56.74 |
| AT2G22800.1 | Thale cress | nucleus | 54.77 | 56.57 |
| Bra017853.1-P | Field mustard | nucleus | 55.48 | 55.87 |
| CDY67919 | Canola | nucleus | 55.48 | 55.67 |
| Bra011786.1-P | Field mustard | nucleus | 55.48 | 55.67 |
| Bra010612.1-P | Field mustard | nucleus | 52.65 | 55.19 |
| Bra030200.1-P | Field mustard | nucleus | 54.77 | 55.16 |
| CDY60301 | Canola | nucleus | 52.3 | 54.81 |
| KRH40151 | Soybean | nucleus | 38.87 | 48.03 |
| KRH19131 | Soybean | nucleus | 34.98 | 46.48 |
| KRH02731 | Soybean | nucleus | 34.28 | 46.41 |
| KRH50371 | Soybean | nucleus | 33.92 | 45.07 |
| KRH12370 | Soybean | nucleus | 35.34 | 44.25 |
| KRH77331 | Soybean | nucleus | 41.34 | 43.66 |
| KRG89300 | Soybean | nucleus | 33.57 | 43.38 |
| KRH37372 | Soybean | nucleus | 35.69 | 42.62 |
| KRH01102 | Soybean | nucleus | 42.76 | 41.72 |
| KRH67080 | Soybean | nucleus | 42.4 | 41.67 |
| KRH61469 | Soybean | nucleus | 42.05 | 41.03 |
| KRH04179 | Soybean | nucleus | 43.11 | 40.8 |
| KRH28155 | Soybean | nucleus | 40.99 | 40.7 |
| KRH57467 | Soybean | nucleus | 42.76 | 40.6 |
| KRG95402 | Soybean | nucleus, plastid | 41.34 | 40.07 |
| KRH15480 | Soybean | nucleus | 43.11 | 40.0 |
| KRG88660 | Soybean | nucleus | 42.76 | 39.16 |
| KRH66562 | Soybean | nucleus | 42.76 | 39.03 |
| KRH71831 | Soybean | plastid | 44.88 | 38.6 |
| KRH38083 | Soybean | nucleus | 44.52 | 38.53 |
| KRH48783 | Soybean | nucleus | 43.11 | 38.49 |
| KRH43419 | Soybean | nucleus | 45.94 | 34.48 |
| KRH13873 | Soybean | nucleus | 45.94 | 33.85 |
Protein Annotations
| Gene3D:1.10.10.60 | EntrezGene:100795135 | MapMan:15.5.3.1 | EMBL:ACUP02006744 | ncoils:Coil | EnsemblPlantsGene:GLYMA_11G045100 |
| GO:GO:0003674 | GO:GO:0003676 | GO:GO:0003677 | GO:GO:0003700 | GO:GO:0005488 | GO:GO:0005575 |
| GO:GO:0005622 | GO:GO:0005623 | GO:GO:0005634 | GO:GO:0006139 | GO:GO:0006355 | GO:GO:0008150 |
| GO:GO:0008152 | GO:GO:0009058 | GO:GO:0009987 | GO:GO:0043565 | InterPro:Homeobox-like_sf | InterPro:Homeobox_CS |
| InterPro:Homeobox_dom | UniProt:I1LH34 | InterPro:IPR001356 | EnsemblPlants:KRH28314 | ProteinID:KRH28314 | ProteinID:KRH28314.1 |
| InterPro:Leu_zip_homeo | PFAM:PF00046 | PFAM:PF02183 | ScanProsite:PS00027 | PFscan:PS50071 | PANTHER:PTHR24326 |
| PANTHER:PTHR24326:SF327 | SMART:SM00340 | SMART:SM00389 | SUPFAM:SSF46689 | UniParc:UPI000233D172 | SEG:seg |
Description
hypothetical protein
Coordinates
chr11:-:3326055..3327915
Molecular Weight (calculated)
31684.7 Da
IEP (calculated)
8.636
GRAVY (calculated)
-0.714
Length
283 amino acids
Sequence
(BLAST)
(BLAST)
001: MGLDQDANSS GLHLVLGLSL TASVKETAPS TKPDDHHLCV IKPTPTKPYP SKEPSLTLGL SGKGYHVPRN NVAINKVYCE DPLEFSRQTS PHSVVSSFST
101: GRVIKRERDL SCEDMEVDAE ERVSSRVSDE DEDGTNARKK LRLTKEQSAL LEESFKQHST LNPKQKQALA RQLNLRPRQV EVWFQNRRAR TKLKQTEVDC
201: EFLKKCCETL TDENRRLKKE LQELKALKLA QPLYMPMPAA TLTMCPSCER LGGVSDNGSN KSPFSMAPKP HFYNPFANPS AAC
101: GRVIKRERDL SCEDMEVDAE ERVSSRVSDE DEDGTNARKK LRLTKEQSAL LEESFKQHST LNPKQKQALA RQLNLRPRQV EVWFQNRRAR TKLKQTEVDC
201: EFLKKCCETL TDENRRLKKE LQELKALKLA QPLYMPMPAA TLTMCPSCER LGGVSDNGSN KSPFSMAPKP HFYNPFANPS AAC
001: MGLDDSCNTG LVLGLGLSPT PNNYNHAIKK SSSTVDHRFI RLDPSLTLSL SGESYKIKTG AGAGDQICRQ TSSHSGISSF SSGRVKRERE ISGGDGEEEA
101: EETTERVVCS RVSDDHDDEE GVSARKKLRL TKQQSALLED NFKLHSTLNP KQKQALARQL NLRPRQVEVW FQNRRARTKL KQTEVDCEFL KKCCETLTDE
201: NRRLQKELQD LKALKLSQPF YMHMPAATLT MCPSCERLGG GGVGGDTTAV DEETAKGAFS IVTKPRFYNP FTNPSAAC
101: EETTERVVCS RVSDDHDDEE GVSARKKLRL TKQQSALLED NFKLHSTLNP KQKQALARQL NLRPRQVEVW FQNRRARTKL KQTEVDCEFL KKCCETLTDE
201: NRRLQKELQD LKALKLSQPF YMHMPAATLT MCPSCERLGG GGVGGDTTAV DEETAKGAFS IVTKPRFYNP FTNPSAAC
Arabidopsis Description
HAT22Homeobox-leucine zipper protein HAT22 [Source:UniProtKB/Swiss-Prot;Acc:P46604]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.