CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: nucleus

Predictor Summary:

nucleus 5
mitochondrion 1
plastid 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	nucleus
Any Predictor:	mitochondrion, nucleus, plastid
BaCelLo:	nucleus
EpiLoc:	nucleus
MultiLoc:	nucleus
Plant-mPloc:	nucleus
PProwler:	mitochondrion
WoLF PSORT:	plastid
YLoc:	nucleus

PPI

Inferred distinct locusB in Crop

locusB	locations
KRH01102
KRH04366
KRH12426
KRH28314
KRH40151
KRH48783
KRH58171
KRH66562
KRH77172

Inferred from Arabidopsis experimental PPI

Ath locusA	locusB	Ath locusB	Paper
AT5G06710.1	KRH01102	AT3G60390.1	21798944
AT5G06710.1	KRH40151	AT3G60390.1	21798944
AT5G06710.1	KRH48783	AT3G60390.1	21798944
AT5G06710.1	KRH66562	AT3G60390.1	21798944
AT5G06710.1	KRH12426	AT4G26100.1	21798944
AT5G06710.1	KRH04366	AT4G37790.1	21798944
AT5G06710.1	KRH28314	AT4G37790.1	21798944
AT5G06710.1	KRH58171	AT4G37790.1	21798944
AT5G06710.1	KRH77172	AT4G37790.1	21798944

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Os09t0447000-00	Rice	nucleus	28.82	92.22
KRG95402	Soybean	nucleus, plastid	87.15	85.96
KRH38083	Soybean	nucleus	65.97	58.1
GSMUA_Achr3P07740_001	Banana	nucleus	38.89	57.73
KRH71831	Soybean	plastid	65.28	57.14
VIT_08s0007g06670.t01	Wine grape	nucleus	61.81	53.78
CDX81016	Canola	nucleus	42.71	47.31
AT5G06710.1	Thale cress	nucleus	54.86	47.02
Zm00001d020670_P001	Maize	nucleus	54.17	46.85
KRH40151	Soybean	nucleus	37.15	46.72
KRH77331	Soybean	nucleus	43.06	46.27
GSMUA_Achr7P02380_001	Banana	nucleus	46.18	46.18
GSMUA_Achr9P15710_001	Banana	nucleus	49.31	45.51
KRH50371	Soybean	nucleus	33.33	45.07
Bra005907.1-P	Field mustard	nucleus	50.35	45.03
GSMUA_Achr8P22800_001	Banana	nucleus	40.97	44.53
Bra009219.1-P	Field mustard	nucleus	52.43	44.41
CDX70076	Canola	nucleus	52.43	44.41
KRH43419	Soybean	nucleus	57.99	44.3
KRH13873	Soybean	nucleus	59.03	44.27
CDX98948	Canola	nucleus	52.08	44.25
CDY55775	Canola	nucleus	49.31	44.1
KRG89300	Soybean	nucleus	33.33	43.84
KRH57467	Soybean	nucleus	44.79	43.29
KRH28155	Soybean	nucleus	42.71	43.16
KRH12370	Soybean	nucleus	33.68	42.92
KRH04179	Soybean	nucleus	44.1	42.47
KRH28314	Soybean	nucleus	41.67	42.4
Zm00001d005875_P001	Maize	nucleus	47.57	42.15
KRH37372	Soybean	nucleus	34.38	41.77
KRH77172	Soybean	nucleus	40.62	41.34
TraesCS5D01G235300.1	Wheat	nucleus	48.61	41.3
EER98990	Sorghum	nucleus	52.43	40.92
TraesCS5B01G231300.1	Wheat	nucleus	50.35	40.85
TraesCS5A01G232700.1	Wheat	nucleus	49.65	40.74
KRH02731	Soybean	nucleus	29.51	40.67
KRH19131	Soybean	nucleus	29.86	40.38
KRH66562	Soybean	nucleus	42.71	39.68
KRH01102	Soybean	nucleus	39.58	39.31
KRH48783	Soybean	nucleus	42.71	38.8
KXG25294	Sorghum	nucleus	50.69	38.22
KRH04366	Soybean	nucleus	39.93	36.86
CDX78884	Canola	nucleus	31.94	36.51
KRH58171	Soybean	extracellular, nucleus	38.54	36.39
HORVU5Hr1G067010.2	Barley	nucleus	48.96	35.88
Zm00001d031745_P001	Maize	plastid	51.74	33.63
KRH61469	Soybean	nucleus	32.29	32.07
KRH15480	Soybean	nucleus	33.68	31.8
KRG88660	Soybean	nucleus	33.33	31.07

Protein Annotations

Gene3D:1.10.10.60	EntrezGene:100784703	MapMan:15.5.3.1	UniProt:A0A0K2CTA0	EMBL:ACUP02002025	ncoils:Coil
EnsemblPlantsGene:GLYMA_03G145800	GO:GO:0003674	GO:GO:0003676	GO:GO:0003677	GO:GO:0003700	GO:GO:0005488
GO:GO:0005575	GO:GO:0005622	GO:GO:0005623	GO:GO:0005634	GO:GO:0006139	GO:GO:0006355
GO:GO:0008150	GO:GO:0008152	GO:GO:0009058	GO:GO:0009987	GO:GO:0043565	InterPro:Homeobox-like_sf
InterPro:Homeobox_CS	InterPro:Homeobox_dom	UniProt:I1JNL9	InterPro:IPR001356	EnsemblPlants:KRH67080	ProteinID:KRH67080
ProteinID:KRH67080.1	EMBL:KT031163	InterPro:Leu_zip_homeo	PFAM:PF00046	PFAM:PF02183	ScanProsite:PS00027
PFscan:PS50071	PANTHER:PTHR24326	PANTHER:PTHR24326:SF105	SMART:SM00340	SMART:SM00389	SUPFAM:SSF46689
UniParc:UPI0002336B29	SEG:seg	:	:	:	:

Description

hypothetical protein

Coordinates

chr3:+:36122585..36124777

Molecular Weight (calculated)

31676.4 Da

IEP (calculated)

8.205

GRAVY (calculated)

-0.518

Length

288 amino acids

Sequence
(BLAST)

001: MELALSLGDT PKTVSLATKN DSVSLCIALA DDKRGSSYPP VQLDLLPSTP VLPFSHSHLR IPWLSDALGM ERVTSEIPVR VVDDTDDGAA LSSPNSAVSS
101: FQMDYCVRNN RKSSEGASDD DENGSSRKKL RLSKQQSAFL EDSFKEHTTL NPKQKLALAK QLNLRPRQVE VWFQNRRART KLKQTEVDCE YLKRCCESLT
201: EENRRLQKEL QELRALKTCQ PFFMQLPATT LTMCPACERV ATNTATGAAA AAASTTTTNN NNASAPTNNN SVSQISAAMS VDKPRILP

Best Arabidopsis Sequence Match ( AT5G06710.1 )
(BLAST)

001: MELALSLGDN TKKQFSFMEK NSKINNPSVS STSTSEKDLG FCMALDVAFG GHRSLSSSSS PSVEDEKKKP APRAKKSDEF RVSSSVDPPL QLQLHFPNWL
101: PENSKGRQGG RMPLGAATVV EEEEEEEEAV PSMSVSPPDS VTSSFQLDFG IKSYGYERRS NKRDIDDEVE RSASRASNED NDDENGSTRK KLRLSKDQSA
201: FLEDSFKEHS TLNPKQKIAL AKQLNLRPRQ VEVWFQNRRA RTKLKQTEVD CEYLKRCCES LTEENRRLQK EVKELRTLKT STPFYMQLPA TTLTMCPSCE
301: RVATSAAQPS TSAAHNLCLS TSSLIPVKPR PAKQVS

Arabidopsis Description

HAT14Homeobox-leucine zipper protein HAT14 [Source:UniProtKB/Swiss-Prot;Acc:P46665]
SUBAcon: [nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.