Factsheet for Zm00001d020670_P001

Subcellular Localization

min:

: max

Winner_takes_all: nucleus

Predictor Summary:

nucleus 3
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	nucleus
Any Predictor:	mitochondrion, nucleus
MultiLoc:	nucleus
PProwler:	mitochondrion
WoLF PSORT:	nucleus
YLoc:	nucleus

PPI

Inferred distinct locusB in Crop

locusB	locations
Zm00001d011696_P002
Zm00001d043693_P002

Inferred from Arabidopsis experimental PPI

Ath locusA	locusB	Ath locusB	Paper
AT5G06710.1	Zm00001d011696_P002	AT4G26100.1	21798944
AT5G06710.1	Zm00001d043693_P002	AT4G26100.1	21798944

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Os09t0447000-00	Rice	nucleus	26.13	96.67
EER98990	Sorghum	nucleus	84.98	76.69
GSMUA_Achr3P07740_001	Banana	nucleus	42.04	72.16
TraesCS5D01G235300.1	Wheat	nucleus	71.17	69.91
TraesCS5B01G231300.1	Wheat	nucleus	72.07	67.61
TraesCS5A01G232700.1	Wheat	nucleus	70.87	67.24
HORVU5Hr1G067010.2	Barley	nucleus	71.17	60.31
GSMUA_Achr9P15710_001	Banana	nucleus	53.15	56.73
KRH67080	Soybean	nucleus	46.85	54.17
Zm00001d005875_P001	Maize	nucleus	52.85	54.15
Zm00001d002754_P001	Maize	nucleus	36.04	52.86
GSMUA_Achr7P02380_001	Banana	nucleus	44.74	51.74
KRG95402	Soybean	nucleus, plastid	45.05	51.37
VIT_08s0007g06670.t01	Wine grape	nucleus	50.45	50.76
VIT_13s0156g00260.t01	Wine grape	nucleus	52.85	49.16
KRH71831	Soybean	plastid	48.35	48.94
KRH38083	Soybean	nucleus	48.05	48.93
Zm00001d038941_P001	Maize	nucleus	11.11	47.44
CDX81016	Canola	nucleus	36.94	47.31
Zm00001d031745_P001	Maize	plastid	62.16	46.73
GSMUA_Achr8P22800_001	Banana	nucleus	36.34	45.66
KRH43419	Soybean	nucleus	50.45	44.56
Zm00001d030191_P001	Maize	nucleus	34.83	44.27
Zm00001d044081_P001	Maize	nucleus	29.73	44.0
Solyc01g073910.2.1	Tomato	nucleus	48.05	43.84
KRH13873	Soybean	nucleus	50.45	43.75
PGSC0003DMT400016146	Potato	nucleus	48.65	43.43
Zm00001d028304_P001	Maize	nucleus	37.84	43.15
CDX70076	Canola	nucleus	43.54	42.65
Bra009219.1-P	Field mustard	nucleus	43.54	42.65
AT5G06710.1	Thale cress	nucleus	42.94	42.56
Bra005907.1-P	Field mustard	nucleus	41.14	42.55
CDX98948	Canola	nucleus	43.24	42.48
PGSC0003DMT400060951	Potato	nucleus	44.44	42.17
Zm00001d045400_P001	Maize	nucleus	34.23	41.91
Solyc10g080540.1.1	Tomato	nucleus	44.14	41.53
CDY55775	Canola	nucleus	39.94	41.3
Zm00001d014628_P001	Maize	nucleus	27.03	40.72
Zm00001d036118_P001	Maize	nucleus	31.83	40.61
Zm00001d029934_P001	Maize	nucleus	39.04	40.5
Zm00001d047995_P001	Maize	nucleus	35.74	40.2
Zm00001d014629_P001	Maize	nucleus	27.93	39.74
Zm00001d014630_P001	Maize	nucleus	28.83	38.87
Zm00001d036510_P001	Maize	nucleus	26.73	35.04
CDX78884	Canola	nucleus	26.43	34.92
Zm00001d045398_P001	Maize	nucleus	30.33	34.47
Zm00001d050834_P001	Maize	nucleus	33.03	33.23
Zm00001d000303_P001	Maize	nucleus	24.32	30.11
Zm00001d009802_P001	Maize	nucleus, plastid	14.71	27.84
Zm00001d007525_P001	Maize	plasma membrane	18.02	21.74

Protein Annotations

Gene3D:1.10.10.60	MapMan:15.5.3.1	UniProt:B4FH59	EMBL:BT036447	ncoils:Coil	GO:GO:0003674
GO:GO:0003676	GO:GO:0003677	GO:GO:0003700	GO:GO:0005488	GO:GO:0005575	GO:GO:0005622
GO:GO:0005623	GO:GO:0005634	GO:GO:0006139	GO:GO:0006355	GO:GO:0008150	GO:GO:0008152
GO:GO:0009058	GO:GO:0009987	GO:GO:0043565	InterPro:HD-ZIP_N	InterPro:Homeobox-like_sf	InterPro:Homeobox_CS
InterPro:Homeobox_dom	InterPro:IPR001356	EMBL:KJ726911	InterPro:Leu_zip_homeo	ProteinID:ONM55380.1	PFAM:PF00046
PFAM:PF02183	PFAM:PF04618	ScanProsite:PS00027	PFscan:PS50071	PANTHER:PTHR24326	PANTHER:PTHR24326:SF105
SMART:SM00340	SMART:SM00389	SUPFAM:SSF46689	UniParc:UPI00017B73D7	EnsemblPlantsGene:Zm00001d020670	EnsemblPlants:Zm00001d020670_P001
EnsemblPlants:Zm00001d020670_T001	SEG:seg	:	:	:	:

Description

Homeobox-transcription factor 11Homeobox-leucine zipper protein HAT3

Coordinates

chr7:-:127456340..127458007

Molecular Weight (calculated)

36023.2 Da

IEP (calculated)

7.430

GRAVY (calculated)

-0.656

Length

333 amino acids

Sequence
(BLAST)

001: MELALSLGET MADAGRDLML GLGMGVGVRR EEEAQRGRRD REVRRELEFT ARSARSSPEP AVRLTLLHGL GLPWPPPPSS ETNRHLEASA RGFDVNRAPS
101: LSAAGGAAEE DEEQDEAAAA AASSSPNNSA SSFPTDFSAQ GQVAPGADRA CSRASDEDDG GSARKKLRLS KEQSAFLEDS FKEHATLNPK QKLALAKQLN
201: LRPRQVEVWF QNRRARTKLK QTEVDCEYLK RCCETLTEEN RRLQKELSEL RALKTVHPFY MHLPATTLSM CPSCERVASN SAPAPASSPS PATGIAAPAP
301: EQRPSSFAAL FSSPLNRPLA AQAQPQPQAP ANS

Best Arabidopsis Sequence Match ( AT5G06710.1 )
(BLAST)

001: MELALSLGDN TKKQFSFMEK NSKINNPSVS STSTSEKDLG FCMALDVAFG GHRSLSSSSS PSVEDEKKKP APRAKKSDEF RVSSSVDPPL QLQLHFPNWL
101: PENSKGRQGG RMPLGAATVV EEEEEEEEAV PSMSVSPPDS VTSSFQLDFG IKSYGYERRS NKRDIDDEVE RSASRASNED NDDENGSTRK KLRLSKDQSA
201: FLEDSFKEHS TLNPKQKIAL AKQLNLRPRQ VEVWFQNRRA RTKLKQTEVD CEYLKRCCES LTEENRRLQK EVKELRTLKT STPFYMQLPA TTLTMCPSCE
301: RVATSAAQPS TSAAHNLCLS TSSLIPVKPR PAKQVS

Arabidopsis Description

HAT14Homeobox-leucine zipper protein HAT14 [Source:UniProtKB/Swiss-Prot;Acc:P46665]
SUBAcon: [nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.