Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 3
- plastid 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| EES04526 | Sorghum | nucleus | 69.89 | 72.59 |
| Zm00001d038941_P001 | Maize | nucleus | 17.84 | 61.54 |
| TraesCS6D01G110400.1 | Wheat | nucleus | 37.92 | 53.12 |
| Os02t0149900-00 | Rice | nucleus | 46.84 | 50.81 |
| TraesCSU01G087400.1 | Wheat | nucleus | 39.03 | 50.24 |
| TraesCS6B01G148800.1 | Wheat | nucleus | 39.03 | 50.24 |
| TraesCS6B01G148700.1 | Wheat | nucleus | 38.66 | 49.76 |
| TraesCS6A01G120300.1 | Wheat | nucleus | 37.55 | 49.75 |
| GSMUA_Achr7P15910_001 | Banana | nucleus | 27.51 | 48.05 |
| TraesCS6D01G110600.1 | Wheat | nucleus | 39.78 | 47.56 |
| TraesCS6A01G120600.1 | Wheat | nucleus | 39.03 | 46.46 |
| TraesCS6B01G149000.1 | Wheat | nucleus | 37.92 | 46.36 |
| Zm00001d014628_P001 | Maize | nucleus | 36.43 | 44.34 |
| Zm00001d014629_P001 | Maize | nucleus | 38.29 | 44.02 |
| Zm00001d014630_P001 | Maize | nucleus | 39.78 | 43.32 |
| GSMUA_Achr10P... | Banana | nucleus | 29.0 | 42.86 |
| HORVU6Hr1G021870.1 | Barley | nucleus, plastid | 36.8 | 40.24 |
| Zm00001d036510_P001 | Maize | nucleus | 37.17 | 39.37 |
| PGSC0003DMT400096970 | Potato | nucleus | 26.39 | 35.86 |
| Solyc07g054380.1.1 | Tomato | nucleus | 26.77 | 34.78 |
| KRH12370 | Soybean | nucleus | 27.51 | 32.74 |
| KRH19131 | Soybean | nucleus | 25.65 | 32.39 |
| Zm00001d009802_P001 | Maize | nucleus, plastid | 21.19 | 32.39 |
| GSMUA_Achr2P04490_001 | Banana | nucleus | 27.14 | 32.02 |
| KRH37372 | Soybean | nucleus | 27.88 | 31.65 |
| Zm00001d002754_P001 | Maize | nucleus | 26.39 | 31.28 |
| KRH02731 | Soybean | nucleus | 24.16 | 31.1 |
| GSMUA_Achr7P05000_001 | Banana | nucleus | 21.19 | 30.65 |
| GSMUA_Achr1P10390_001 | Banana | nucleus | 26.39 | 30.6 |
| Zm00001d030191_P001 | Maize | nucleus | 27.88 | 28.63 |
| Zm00001d036118_P001 | Maize | nucleus | 27.14 | 27.97 |
| Zm00001d045398_P001 | Maize | nucleus | 30.11 | 27.65 |
| Zm00001d028304_P001 | Maize | nucleus | 28.62 | 26.37 |
| Zm00001d047995_P001 | Maize | nucleus | 29.0 | 26.35 |
| Zm00001d045400_P001 | Maize | nucleus | 26.39 | 26.1 |
| Zm00001d005875_P001 | Maize | nucleus | 31.23 | 25.85 |
| Zm00001d044081_P001 | Maize | nucleus | 21.56 | 25.78 |
| Zm00001d020670_P001 | Maize | nucleus | 30.11 | 24.32 |
| Zm00001d029934_P001 | Maize | nucleus | 27.88 | 23.36 |
| Zm00001d050834_P001 | Maize | nucleus | 27.14 | 22.05 |
| Zm00001d007525_P001 | Maize | plasma membrane | 21.93 | 21.38 |
| Zm00001d031745_P001 | Maize | plastid | 30.86 | 18.74 |
Protein Annotations
| Gene3D:1.10.10.60 | EntrezGene:103654916 | MapMan:15.5.3.1 | UniProt:A0A1X7YHR4 | ncoils:Coil | GO:GO:0003674 |
| GO:GO:0003676 | GO:GO:0003677 | GO:GO:0003700 | GO:GO:0005488 | GO:GO:0005575 | GO:GO:0005622 |
| GO:GO:0005623 | GO:GO:0005634 | GO:GO:0006139 | GO:GO:0006355 | GO:GO:0008150 | GO:GO:0008152 |
| GO:GO:0009058 | GO:GO:0009987 | GO:GO:0043565 | InterPro:HTH_motif | InterPro:Homeobox-like_sf | InterPro:Homeobox_CS |
| InterPro:Homeobox_dom | InterPro:IPR001356 | InterPro:Leu_zip_homeo | PFAM:PF00046 | PFAM:PF02183 | PRINTS:PR00031 |
| ScanProsite:PS00027 | PFscan:PS50071 | PANTHER:PTHR24326 | PANTHER:PTHR24326:SF219 | SMART:SM00340 | SMART:SM00389 |
| SUPFAM:SSF46689 | UniParc:UPI0002215581 | EnsemblPlantsGene:Zm00001d000303 | EnsemblPlants:Zm00001d000303_P001 | EnsemblPlants:Zm00001d000303_T001 | SEG:seg |
Description
Homeobox-transcription factor 24Putative homeobox DNA-binding and leucine zipper domain family protein
Coordinates
chrB73V4_ctg107:+:44572..45477
Molecular Weight (calculated)
28270.2 Da
IEP (calculated)
10.209
GRAVY (calculated)
-0.516
Length
269 amino acids
Sequence
(BLAST)
(BLAST)
001: MSSLTTAASS SSSMEEHCYS VSAEEVVGTH LSLGIGGGGG GGDKRMLTTL PPSRTVVQLF GEVLSVQDGD EAQALRHHHT GRPTAASRKK KRRDAAAGGA
101: SATDAAANGH HHQSKKTKTT AARRDDGGGG GGGGRKKLRL TAAQATLLED SFRAHNILSH GEKQELARQA GLSARQVEVW FQNRRARTKL KQTEVDCDLL
201: RRWCARLSDD NDRLRRDLAD LRRAAAASAG LGAVVCCASC GADRQLALAA AADNVLPSVA SPSHSPHLT
101: SATDAAANGH HHQSKKTKTT AARRDDGGGG GGGGRKKLRL TAAQATLLED SFRAHNILSH GEKQELARQA GLSARQVEVW FQNRRARTKL KQTEVDCDLL
201: RRWCARLSDD NDRLRRDLAD LRRAAAASAG LGAVVCCASC GADRQLALAA AADNVLPSVA SPSHSPHLT
001: MGLDDSCNTG LVLGLGLSPT PNNYNHAIKK SSSTVDHRFI RLDPSLTLSL SGESYKIKTG AGAGDQICRQ TSSHSGISSF SSGRVKRERE ISGGDGEEEA
101: EETTERVVCS RVSDDHDDEE GVSARKKLRL TKQQSALLED NFKLHSTLNP KQKQALARQL NLRPRQVEVW FQNRRARTKL KQTEVDCEFL KKCCETLTDE
201: NRRLQKELQD LKALKLSQPF YMHMPAATLT MCPSCERLGG GGVGGDTTAV DEETAKGAFS IVTKPRFYNP FTNPSAAC
101: EETTERVVCS RVSDDHDDEE GVSARKKLRL TKQQSALLED NFKLHSTLNP KQKQALARQL NLRPRQVEVW FQNRRARTKL KQTEVDCEFL KKCCETLTDE
201: NRRLQKELQD LKALKLSQPF YMHMPAATLT MCPSCERLGG GGVGGDTTAV DEETAKGAFS IVTKPRFYNP FTNPSAAC
Arabidopsis Description
HAT22Homeobox-leucine zipper protein HAT22 [Source:UniProtKB/Swiss-Prot;Acc:P46604]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.