Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 6
- extracellular 1
- endoplasmic reticulum 1
- vacuole 1
- plasma membrane 1
- golgi 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| GSMUA_Achr7P15910_001 | Banana | nucleus | 57.69 | 68.18 |
| Zm00001d038941_P001 | Maize | nucleus | 19.78 | 46.15 |
| PGSC0003DMT400096970 | Potato | nucleus | 43.41 | 39.9 |
| TraesCS6D01G110400.1 | Wheat | nucleus | 41.21 | 39.06 |
| GSMUA_Achr7P05000_001 | Banana | nucleus | 39.56 | 38.71 |
| GSMUA_Achr4P06480_001 | Banana | nucleus | 35.16 | 38.55 |
| TraesCS7A01G423800.1 | Wheat | nucleus | 46.15 | 38.36 |
| TraesCS6A01G120300.1 | Wheat | nucleus | 42.31 | 37.93 |
| Solyc07g054380.1.1 | Tomato | nucleus | 42.86 | 37.68 |
| TraesCS7D01G417700.1 | Wheat | nucleus | 45.6 | 37.39 |
| HORVU7Hr1G098230.1 | Barley | nucleus | 45.6 | 37.05 |
| HORVU5Hr1G049790.1 | Barley | nucleus | 45.6 | 37.05 |
| TraesCS7B01G326300.1 | Wheat | nucleus | 45.05 | 36.77 |
| GSMUA_Achr3P07740_001 | Banana | nucleus | 39.01 | 36.6 |
| TraesCS6A01G120600.1 | Wheat | nucleus | 44.51 | 35.84 |
| Zm00001d014628_P001 | Maize | nucleus | 43.41 | 35.75 |
| KRH19131 | Soybean | nucleus | 41.76 | 35.68 |
| TraesCS6D01G110600.1 | Wheat | nucleus | 43.96 | 35.56 |
| TraesCS6B01G149000.1 | Wheat | nucleus | 42.86 | 35.45 |
| TraesCSU01G087400.1 | Wheat | nucleus | 40.66 | 35.41 |
| TraesCS6B01G148800.1 | Wheat | nucleus | 40.66 | 35.41 |
| KRH12370 | Soybean | nucleus | 42.86 | 34.51 |
| GSMUA_Achr1P10390_001 | Banana | nucleus | 43.96 | 34.48 |
| KRH02731 | Soybean | nucleus | 39.56 | 34.45 |
| TraesCS6B01G148700.1 | Wheat | nucleus | 39.56 | 34.45 |
| Os06t0698200-00 | Rice | nucleus | 47.8 | 33.98 |
| EER90307 | Sorghum | nucleus | 43.96 | 33.9 |
| KRH37372 | Soybean | nucleus | 43.96 | 33.76 |
| GSMUA_Achr2P04490_001 | Banana | nucleus | 41.76 | 33.33 |
| Zm00001d014629_P001 | Maize | nucleus | 42.31 | 32.91 |
| Zm00001d014630_P001 | Maize | nucleus | 44.51 | 32.79 |
| HORVU6Hr1G021870.1 | Barley | nucleus, plastid | 43.96 | 32.52 |
| GSMUA_AchrUn_... | Banana | nucleus | 38.46 | 32.11 |
| Os02t0149900-00 | Rice | nucleus | 42.86 | 31.45 |
| Zm00001d036510_P001 | Maize | nucleus | 42.86 | 30.71 |
| GSMUA_Achr3P15190_001 | Banana | nucleus | 39.56 | 30.38 |
| GSMUA_Achr4P13440_001 | Banana | nucleus | 37.36 | 29.96 |
| GSMUA_Achr4P01350_001 | Banana | nucleus | 41.76 | 29.8 |
| GSMUA_Achr9P09800_001 | Banana | nucleus | 39.01 | 29.46 |
| GSMUA_Achr6P30180_001 | Banana | nucleus | 40.66 | 29.37 |
| GSMUA_Achr11P... | Banana | nucleus | 39.56 | 29.15 |
| Zm00001d000303_P001 | Maize | nucleus | 42.86 | 29.0 |
| GSMUA_Achr9P26300_001 | Banana | nucleus | 39.56 | 27.91 |
| GSMUA_AchrUn_... | Banana | nucleus | 42.31 | 27.9 |
| EES04526 | Sorghum | nucleus | 39.56 | 27.8 |
| GSMUA_Achr8P26480_001 | Banana | nucleus | 42.31 | 27.4 |
| GSMUA_Achr7P27530_001 | Banana | nucleus | 38.46 | 27.24 |
| GSMUA_Achr5P13530_001 | Banana | nucleus | 41.21 | 26.88 |
| GSMUA_Achr8P05100_001 | Banana | nucleus | 41.76 | 26.76 |
| GSMUA_Achr8P22800_001 | Banana | nucleus | 37.36 | 25.66 |
| Zm00001d009802_P001 | Maize | nucleus, plastid | 24.73 | 25.57 |
| GSMUA_Achr2P10040_001 | Banana | nucleus | 40.66 | 25.34 |
| GSMUA_Achr4P21600_001 | Banana | nucleus | 38.46 | 25.27 |
| GSMUA_Achr1P01670_001 | Banana | nucleus | 40.66 | 24.92 |
| GSMUA_Achr7P02380_001 | Banana | nucleus | 39.01 | 24.65 |
| GSMUA_Achr6P31710_001 | Banana | nucleus | 38.46 | 24.48 |
| GSMUA_AchrUn_... | Banana | plastid | 41.21 | 24.04 |
| GSMUA_Achr9P15710_001 | Banana | nucleus | 40.66 | 23.72 |
| GSMUA_Achr7P06950_001 | Banana | nucleus | 23.08 | 23.2 |
| GSMUA_Achr1P04360_001 | Banana | nucleus | 37.36 | 22.52 |
| Zm00001d007525_P001 | Maize | plasma membrane | 23.63 | 15.58 |
Protein Annotations
| Gene3D:1.10.10.60 | MapMan:15.5.3.1 | ncoils:Coil | GO:GO:0003674 | GO:GO:0003676 | GO:GO:0003677 |
| GO:GO:0003700 | GO:GO:0005488 | GO:GO:0005575 | GO:GO:0005622 | GO:GO:0005623 | GO:GO:0005634 |
| GO:GO:0006139 | GO:GO:0006355 | GO:GO:0008150 | GO:GO:0008152 | GO:GO:0009058 | GO:GO:0009987 |
| GO:GO:0043565 | EnsemblPlantsGene:GSMUA_Achr10G23440_001 | EnsemblPlants:GSMUA_Achr10P23440_001 | EnsemblPlants:GSMUA_Achr10T23440_001 | InterPro:Homeobox-like_sf | InterPro:Homeobox_CS |
| InterPro:Homeobox_dom | InterPro:IPR001356 | InterPro:Leu_zip_homeo | UniProt:M0RKR9 | PFAM:PF00046 | PFAM:PF02183 |
| ScanProsite:PS00027 | PFscan:PS50071 | PANTHER:PTHR24326 | PANTHER:PTHR24326:SF252 | SMART:SM00340 | SMART:SM00389 |
| SUPFAM:SSF46689 | UniParc:UPI000296408D | : | : | : | : |
Description
Hypothetical protein [Source:GMGC_GENE;Acc:GSMUA_Achr10G23440_001]
Coordinates
chr10:+:28194629..28196770
Molecular Weight (calculated)
20908.2 Da
IEP (calculated)
8.942
GRAVY (calculated)
-0.677
Length
182 amino acids
Sequence
(BLAST)
(BLAST)
001: MLLIITNCFE EECNVSLSLA IGGVGDLPFI KNLNQTSFKE ETEEKRDGGG TRKKLRLSGE QLALLEDSFR AHSTLAPDQK QELAQRLHLQ PRQVEVWFQN
101: RRARTKLKQT EVDCGFLRRC CERLANENRR LKRELMEMRS VVKPGPQLSV EHRKAARLRM CSSCEKMTSD EKESSLLSTI NS
101: RRARTKLKQT EVDCGFLRRC CERLANENRR LKRELMEMRS VVKPGPQLSV EHRKAARLRM CSSCEKMTSD EKESSLLSTI NS
001: MMFEKDDLGL SLGLNFPKKQ INLKSNPSVS VTPSSSSFGL FRRSSWNESF TSSVPNSDSS QKETRTFIRG IDVNRPPSTA EYGDEDAGVS SPNSTVSSST
101: GKRSEREEDT DPQGSRGISD DEDGDNSRKK LRLSKDQSAI LEETFKDHST LNPKQKQALA KQLGLRARQV EVWFQNRRAR TKLKQTEVDC EFLRRCCENL
201: TEENRRLQKE VTELRALKLS PQFYMHMSPP TTLTMCPSCE HVSVPPPQPQ AATSAHHRSL PVNAWAPATR ISHGLTFDAL RPRS
101: GKRSEREEDT DPQGSRGISD DEDGDNSRKK LRLSKDQSAI LEETFKDHST LNPKQKQALA KQLGLRARQV EVWFQNRRAR TKLKQTEVDC EFLRRCCENL
201: TEENRRLQKE VTELRALKLS PQFYMHMSPP TTLTMCPSCE HVSVPPPQPQ AATSAHHRSL PVNAWAPATR ISHGLTFDAL RPRS
Arabidopsis Description
HAT4Homeobox-leucine zipper protein HAT4 [Source:UniProtKB/Swiss-Prot;Acc:Q05466]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.