CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: nucleus

Predictor Summary:

nucleus 6
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	nucleus
Any Predictor:	mitochondrion, nucleus
BaCelLo:	nucleus
EpiLoc:	nucleus
MultiLoc:	nucleus
Plant-mPloc:	nucleus
PProwler:	mitochondrion
WoLF PSORT:	nucleus
YLoc:	nucleus

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Zm00001d014630_P001	Maize	nucleus	81.36	77.73
Zm00001d014628_P001	Maize	nucleus	71.61	76.47
Zm00001d038941_P001	Maize	nucleus	24.58	74.36
Zm00001d014629_P001	Maize	nucleus	72.03	72.65
Zm00001d036510_P001	Maize	nucleus	68.64	63.78
TraesCS7A01G423800.1	Wheat	nucleus	48.73	52.51
TraesCS7D01G417700.1	Wheat	nucleus	48.73	51.8
HORVU7Hr1G098230.1	Barley	nucleus	49.15	51.79
HORVU5Hr1G049790.1	Barley	nucleus	49.15	51.79
TraesCS7B01G326300.1	Wheat	nucleus	48.73	51.57
Os06t0698200-00	Rice	nucleus	55.93	51.56
GSMUA_Achr7P15910_001	Banana	nucleus	32.2	49.35
Zm00001d009802_P001	Maize	nucleus, plastid	33.9	45.45
GSMUA_Achr10P...	Banana	nucleus	33.9	43.96
PGSC0003DMT400096970	Potato	nucleus	35.59	42.42
Solyc07g054380.1.1	Tomato	nucleus	36.44	41.55
EES04526	Sorghum	nucleus	41.95	38.22
KRH12370	Soybean	nucleus	36.44	38.05
KRH19131	Soybean	nucleus	33.47	37.09
GSMUA_Achr2P04490_001	Banana	nucleus	35.59	36.84
KRH37372	Soybean	nucleus	36.44	36.29
KRH02731	Soybean	nucleus	30.93	34.93
EER91838	Sorghum	nucleus	37.29	34.65
EES12613	Sorghum	nucleus	33.9	34.33
GSMUA_Achr7P05000_001	Banana	nucleus	25.85	32.8
GSMUA_Achr1P10390_001	Banana	nucleus	31.36	31.9
EER92607	Sorghum	nucleus	38.56	30.43
EES03343	Sorghum	nucleus	28.39	29.13
EER87812	Sorghum	nucleus	33.05	27.37
EER98990	Sorghum	nucleus	41.95	26.83
OQU85171	Sorghum	nucleus	36.44	26.63
EER94486	Sorghum	nucleus	37.29	25.43
KXG25294	Sorghum	nucleus	40.68	25.13
EER87813	Sorghum	plastid	32.2	23.9
Zm00001d007525_P001	Maize	plasma membrane	27.54	23.55

Protein Annotations

Gene3D:1.10.10.60	MapMan:15.5.3.1	EntrezGene:8065137	UniProt:C5Z8U0	ncoils:Coil	EnsemblPlants:EER90307
ProteinID:EER90307	ProteinID:EER90307.1	GO:GO:0003674	GO:GO:0003676	GO:GO:0003677	GO:GO:0003700
GO:GO:0005488	GO:GO:0005575	GO:GO:0005622	GO:GO:0005623	GO:GO:0005634	GO:GO:0006139
GO:GO:0006355	GO:GO:0008150	GO:GO:0008152	GO:GO:0009058	GO:GO:0009987	GO:GO:0043565
InterPro:Homeobox-like_sf	InterPro:Homeobox_CS	InterPro:Homeobox_dom	InterPro:IPR001356	InterPro:Leu_zip_homeo	PFAM:PF00046
PFAM:PF02183	ScanProsite:PS00027	PFscan:PS50071	PANTHER:PTHR24326	PANTHER:PTHR24326:SF252	SMART:SM00340
SMART:SM00389	EnsemblPlantsGene:SORBI_3010G247500	SUPFAM:SSF46689	UniParc:UPI0001A89769	RefSeq:XP_002438940.1	SEG:seg

Description

hypothetical protein

Coordinates

chr10:-:58751560..58753232

Molecular Weight (calculated)

25490.1 Da

IEP (calculated)

9.747

GRAVY (calculated)

-0.594

Length

236 amino acids

Sequence
(BLAST)

001: MSYSTRAMEE EGFGKSWLGL GIGGGDLMKR SRSPAPVQFD LMLFPRSVKE EAAATASKKA EKGARKRSKT TITDDDGQSS HGGPSPSDDD VAVGAGARKK
101: LRLTKEQSTL LEDTFRAHNI LSHAQKQELA RQVNLSTRQV EVWFQNRRAR TKLKQTEVDC EILKRCCESL TGENQRLRLE LAQLQRSAAA AAGLYVQSFP
201: APATAMASAI CPSCDKVTVT SGGGETSGKS STSYSS

Best Arabidopsis Sequence Match ( AT5G06710.1 )
(BLAST)

001: MELALSLGDN TKKQFSFMEK NSKINNPSVS STSTSEKDLG FCMALDVAFG GHRSLSSSSS PSVEDEKKKP APRAKKSDEF RVSSSVDPPL QLQLHFPNWL
101: PENSKGRQGG RMPLGAATVV EEEEEEEEAV PSMSVSPPDS VTSSFQLDFG IKSYGYERRS NKRDIDDEVE RSASRASNED NDDENGSTRK KLRLSKDQSA
201: FLEDSFKEHS TLNPKQKIAL AKQLNLRPRQ VEVWFQNRRA RTKLKQTEVD CEYLKRCCES LTEENRRLQK EVKELRTLKT STPFYMQLPA TTLTMCPSCE
301: RVATSAAQPS TSAAHNLCLS TSSLIPVKPR PAKQVS

Arabidopsis Description

HAT14Homeobox-leucine zipper protein HAT14 [Source:UniProtKB/Swiss-Prot;Acc:P46665]
SUBAcon: [nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.