Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 6
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
Inferred distinct locusB in Crop
| locusB | locations |
|---|---|
| EES01354 |
Inferred from Arabidopsis experimental PPI
| Ath locusA | locusB | Ath locusB | Paper |
|---|---|---|---|
| AT5G06710.1 | EES01354 | AT4G26100.1 | 21798944 |
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Os09t0447000-00 | Rice | nucleus | 24.12 | 98.89 |
| Zm00001d020670_P001 | Maize | nucleus | 76.69 | 84.98 |
| TraesCS5D01G235300.1 | Wheat | nucleus | 69.11 | 75.22 |
| GSMUA_Achr3P07740_001 | Banana | nucleus | 38.48 | 73.2 |
| TraesCS5A01G232700.1 | Wheat | nucleus | 68.56 | 72.08 |
| TraesCS5B01G231300.1 | Wheat | nucleus | 69.11 | 71.83 |
| HORVU5Hr1G067010.2 | Barley | nucleus | 67.21 | 63.1 |
| Zm00001d005875_P001 | Maize | nucleus | 51.76 | 58.77 |
| GSMUA_Achr9P15710_001 | Banana | nucleus | 49.32 | 58.33 |
| KXG25294 | Sorghum | nucleus | 58.81 | 56.81 |
| GSMUA_Achr7P02380_001 | Banana | nucleus | 41.46 | 53.12 |
| EES12613 | Sorghum | nucleus | 33.33 | 52.79 |
| KRH67080 | Soybean | nucleus | 40.92 | 52.43 |
| VIT_08s0007g06670.t01 | Wine grape | nucleus | 46.88 | 52.27 |
| KRG95402 | Soybean | nucleus, plastid | 41.19 | 52.05 |
| VIT_13s0156g00260.t01 | Wine grape | nucleus | 48.51 | 50.0 |
| KRH71831 | Soybean | plastid | 43.09 | 48.33 |
| KRH38083 | Soybean | nucleus | 42.28 | 47.71 |
| CDX81016 | Canola | nucleus | 33.6 | 47.69 |
| EER91838 | Sorghum | nucleus | 31.98 | 46.46 |
| GSMUA_Achr8P22800_001 | Banana | nucleus | 33.33 | 46.42 |
| KRH43419 | Soybean | nucleus | 47.15 | 46.15 |
| Solyc01g073910.2.1 | Tomato | nucleus | 45.53 | 46.03 |
| PGSC0003DMT400016146 | Potato | nucleus | 46.07 | 45.58 |
| KRH13873 | Soybean | nucleus | 47.43 | 45.57 |
| EER92607 | Sorghum | nucleus | 36.04 | 44.48 |
| EES03343 | Sorghum | nucleus | 27.1 | 43.48 |
| CDX98948 | Canola | nucleus | 39.57 | 43.07 |
| CDX70076 | Canola | nucleus | 39.57 | 42.94 |
| Bra009219.1-P | Field mustard | nucleus | 39.57 | 42.94 |
| Bra005907.1-P | Field mustard | nucleus | 37.4 | 42.86 |
| AT5G06710.1 | Thale cress | nucleus | 39.02 | 42.86 |
| PGSC0003DMT400060951 | Potato | nucleus | 40.65 | 42.73 |
| Solyc10g080540.1.1 | Tomato | nucleus | 40.38 | 42.09 |
| EER90307 | Sorghum | nucleus | 26.83 | 41.95 |
| EER87812 | Sorghum | nucleus | 32.25 | 41.75 |
| CDY55775 | Canola | nucleus | 36.31 | 41.61 |
| EER94486 | Sorghum | nucleus | 37.13 | 39.6 |
| CDX78884 | Canola | nucleus | 24.12 | 35.32 |
| EER87813 | Sorghum | plastid | 30.35 | 35.22 |
| OQU85171 | Sorghum | nucleus | 28.73 | 32.82 |
| EES04526 | Sorghum | nucleus | 21.41 | 30.5 |
Protein Annotations
| Gene3D:1.10.10.60 | MapMan:15.5.3.1 | EntrezGene:8081019 | UniProt:C5X256 | ncoils:Coil | EnsemblPlants:EER98990 |
| ProteinID:EER98990 | ProteinID:EER98990.1 | GO:GO:0003674 | GO:GO:0003676 | GO:GO:0003677 | GO:GO:0003700 |
| GO:GO:0005488 | GO:GO:0005575 | GO:GO:0005622 | GO:GO:0005623 | GO:GO:0005634 | GO:GO:0006139 |
| GO:GO:0006355 | GO:GO:0008150 | GO:GO:0008152 | GO:GO:0009058 | GO:GO:0009987 | GO:GO:0043565 |
| InterPro:Homeobox-like_sf | InterPro:Homeobox_CS | InterPro:Homeobox_dom | InterPro:IPR001356 | InterPro:Leu_zip_homeo | PFAM:PF00046 |
| PFAM:PF02183 | ScanProsite:PS00027 | PFscan:PS50071 | PANTHER:PTHR24326 | PANTHER:PTHR24326:SF514 | SMART:SM00340 |
| SMART:SM00389 | EnsemblPlantsGene:SORBI_3002G220300 | SUPFAM:SSF46689 | UniParc:UPI0001A84120 | RefSeq:XP_002462469.1 | SEG:seg |
Description
hypothetical protein
Coordinates
chr2:-:61161894..61164206
Molecular Weight (calculated)
39126.8 Da
IEP (calculated)
7.398
GRAVY (calculated)
-0.571
Length
369 amino acids
Sequence
(BLAST)
(BLAST)
001: MELGLSLGET MADAGRDLVL GLGMGVVGVR REEEAAERGS RRDRDARREL EFGTTGWCGA RSSPEPPAVR LTLLPGLVPR LGGLPWPPPP PPPPPSSETN
101: RHLEASTTRG FDVNRAPSLS VAGAAAAEED EEHDEAGAAA ASSSPNNSAG SFPTDFSAQG GQVAPGGGGD RGACSRASDD DDGGSARKKL RLSKEQSAFL
201: EESFKEHATL NPKQKLALAK QLNLRPRQVE VWFQNRRART KLKQTEVDCE YLKRCCETLT EENRRLQKEL AELRALKTVH PFYMHLPATT LSMCPSCERV
301: ASNSSAPAVA PVAPASSPSP AATGIAASSA PSEQQRPSSF AALFSSPLNR PLVAAQAQPQ PRPQAPASS
101: RHLEASTTRG FDVNRAPSLS VAGAAAAEED EEHDEAGAAA ASSSPNNSAG SFPTDFSAQG GQVAPGGGGD RGACSRASDD DDGGSARKKL RLSKEQSAFL
201: EESFKEHATL NPKQKLALAK QLNLRPRQVE VWFQNRRART KLKQTEVDCE YLKRCCETLT EENRRLQKEL AELRALKTVH PFYMHLPATT LSMCPSCERV
301: ASNSSAPAVA PVAPASSPSP AATGIAASSA PSEQQRPSSF AALFSSPLNR PLVAAQAQPQ PRPQAPASS
001: MELALSLGDN TKKQFSFMEK NSKINNPSVS STSTSEKDLG FCMALDVAFG GHRSLSSSSS PSVEDEKKKP APRAKKSDEF RVSSSVDPPL QLQLHFPNWL
101: PENSKGRQGG RMPLGAATVV EEEEEEEEAV PSMSVSPPDS VTSSFQLDFG IKSYGYERRS NKRDIDDEVE RSASRASNED NDDENGSTRK KLRLSKDQSA
201: FLEDSFKEHS TLNPKQKIAL AKQLNLRPRQ VEVWFQNRRA RTKLKQTEVD CEYLKRCCES LTEENRRLQK EVKELRTLKT STPFYMQLPA TTLTMCPSCE
301: RVATSAAQPS TSAAHNLCLS TSSLIPVKPR PAKQVS
101: PENSKGRQGG RMPLGAATVV EEEEEEEEAV PSMSVSPPDS VTSSFQLDFG IKSYGYERRS NKRDIDDEVE RSASRASNED NDDENGSTRK KLRLSKDQSA
201: FLEDSFKEHS TLNPKQKIAL AKQLNLRPRQ VEVWFQNRRA RTKLKQTEVD CEYLKRCCES LTEENRRLQK EVKELRTLKT STPFYMQLPA TTLTMCPSCE
301: RVATSAAQPS TSAAHNLCLS TSSLIPVKPR PAKQVS
Arabidopsis Description
HAT14Homeobox-leucine zipper protein HAT14 [Source:UniProtKB/Swiss-Prot;Acc:P46665]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.