Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 6
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
Inferred distinct locusB in Crop
Inferred from Arabidopsis experimental PPI
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Os09t0447000-00 | Rice | nucleus | 43.81 | 94.44 |
| GSMUA_Achr9P15710_001 | Banana | nucleus | 86.6 | 53.85 |
| GSMUA_Achr4P06480_001 | Banana | nucleus | 42.78 | 50.0 |
| GSMUA_Achr7P02380_001 | Banana | nucleus | 68.04 | 45.83 |
| GSMUA_Achr7P15910_001 | Banana | nucleus | 36.08 | 45.45 |
| GSMUA_AchrUn_... | Banana | nucleus | 48.45 | 43.12 |
| GSMUA_Achr8P22800_001 | Banana | nucleus | 58.25 | 42.64 |
| GSMUA_Achr11P... | Banana | nucleus | 53.61 | 42.11 |
| Zm00001d020670_P001 | Maize | nucleus | 72.16 | 42.04 |
| GSMUA_Achr4P13440_001 | Banana | nucleus | 47.42 | 40.53 |
| GSMUA_Achr3P15190_001 | Banana | nucleus | 48.97 | 40.08 |
| CDX81016 | Canola | nucleus | 53.61 | 40.0 |
| TraesCS5D01G235300.1 | Wheat | nucleus | 68.56 | 39.23 |
| GSMUA_Achr10P... | Banana | nucleus | 36.6 | 39.01 |
| KRH67080 | Soybean | nucleus | 57.73 | 38.89 |
| EER98990 | Sorghum | nucleus | 73.2 | 38.48 |
| KRG95402 | Soybean | nucleus, plastid | 57.73 | 38.36 |
| TraesCS5A01G232700.1 | Wheat | nucleus | 68.04 | 37.61 |
| TraesCS5B01G231300.1 | Wheat | nucleus | 68.56 | 37.46 |
| GSMUA_Achr9P09800_001 | Banana | nucleus | 46.39 | 37.34 |
| GSMUA_Achr4P21600_001 | Banana | nucleus | 51.55 | 36.1 |
| GSMUA_Achr5P13530_001 | Banana | nucleus | 51.03 | 35.48 |
| GSMUA_Achr7P05000_001 | Banana | nucleus | 34.02 | 35.48 |
| VIT_08s0007g06670.t01 | Wine grape | nucleus | 60.31 | 35.35 |
| GSMUA_AchrUn_... | Banana | nucleus | 50.0 | 35.14 |
| GSMUA_AchrUn_... | Banana | plastid | 55.67 | 34.62 |
| KRH38083 | Soybean | nucleus | 58.25 | 34.56 |
| GSMUA_Achr4P01350_001 | Banana | nucleus | 45.36 | 34.51 |
| VIT_13s0156g00260.t01 | Wine grape | nucleus | 63.4 | 34.36 |
| KRH71831 | Soybean | plastid | 58.25 | 34.35 |
| GSMUA_Achr1P01670_001 | Banana | nucleus | 52.58 | 34.34 |
| GSMUA_Achr7P27530_001 | Banana | nucleus | 45.36 | 34.24 |
| GSMUA_Achr2P10040_001 | Banana | nucleus | 51.03 | 33.9 |
| Zm00001d005875_P001 | Maize | nucleus | 56.7 | 33.85 |
| GSMUA_Achr8P26480_001 | Banana | nucleus | 48.97 | 33.81 |
| GSMUA_Achr2P04490_001 | Banana | nucleus | 39.69 | 33.77 |
| KXG25294 | Sorghum | nucleus | 66.49 | 33.77 |
| Bra005907.1-P | Field mustard | nucleus | 55.67 | 33.54 |
| GSMUA_Achr6P30180_001 | Banana | nucleus | 43.3 | 33.33 |
| GSMUA_Achr9P26300_001 | Banana | nucleus | 44.33 | 33.33 |
| GSMUA_Achr8P05100_001 | Banana | nucleus | 48.45 | 33.1 |
| HORVU5Hr1G067010.2 | Barley | nucleus | 67.01 | 33.08 |
| CDY55775 | Canola | nucleus | 54.12 | 32.61 |
| CDX98948 | Canola | nucleus | 56.7 | 32.45 |
| AT5G06710.1 | Thale cress | nucleus | 56.19 | 32.44 |
| Bra009219.1-P | Field mustard | nucleus | 56.7 | 32.35 |
| CDX70076 | Canola | nucleus | 56.7 | 32.35 |
| PGSC0003DMT400060951 | Potato | nucleus | 57.73 | 31.91 |
| Solyc01g073910.2.1 | Tomato | nucleus | 59.79 | 31.78 |
| GSMUA_Achr6P31710_001 | Banana | nucleus | 46.39 | 31.47 |
| PGSC0003DMT400016146 | Potato | nucleus | 60.31 | 31.37 |
| Solyc10g080540.1.1 | Tomato | nucleus | 57.22 | 31.36 |
| KRH43419 | Soybean | nucleus | 60.31 | 31.03 |
| GSMUA_Achr1P04360_001 | Banana | nucleus | 47.94 | 30.79 |
| GSMUA_Achr7P06950_001 | Banana | nucleus | 28.35 | 30.39 |
| KRH13873 | Soybean | nucleus | 59.79 | 30.21 |
| GSMUA_Achr1P10390_001 | Banana | nucleus | 36.08 | 30.17 |
| Zm00001d031745_P001 | Maize | plastid | 67.53 | 29.57 |
| CDX78884 | Canola | nucleus | 28.35 | 21.83 |
Protein Annotations
| Gene3D:1.10.10.60 | MapMan:15.5.3.1 | ncoils:Coil | GO:GO:0003674 | GO:GO:0003676 | GO:GO:0003677 |
| GO:GO:0003700 | GO:GO:0005488 | GO:GO:0005575 | GO:GO:0005622 | GO:GO:0005623 | GO:GO:0005634 |
| GO:GO:0006139 | GO:GO:0006355 | GO:GO:0008150 | GO:GO:0008152 | GO:GO:0009058 | GO:GO:0009987 |
| GO:GO:0043565 | EnsemblPlantsGene:GSMUA_Achr3G07740_001 | EnsemblPlants:GSMUA_Achr3P07740_001 | EnsemblPlants:GSMUA_Achr3T07740_001 | InterPro:Homeobox-like_sf | InterPro:Homeobox_CS |
| InterPro:Homeobox_dom | InterPro:IPR001356 | InterPro:Leu_zip_homeo | UniProt:M0SCP1 | PFAM:PF00046 | PFAM:PF02183 |
| ScanProsite:PS00027 | PFscan:PS50071 | PANTHER:PTHR24326 | PANTHER:PTHR24326:SF105 | SMART:SM00340 | SMART:SM00389 |
| SUPFAM:SSF46689 | UniParc:UPI0002966424 | SEG:seg | : | : | : |
Description
Homeobox-leucine zipper protein HOX11 [Source:GMGC_GENE;Acc:GSMUA_Achr3G07740_001]
Coordinates
chr3:+:5328650..5330036
Molecular Weight (calculated)
21926.9 Da
IEP (calculated)
7.023
GRAVY (calculated)
-0.917
Length
194 amino acids
Sequence
(BLAST)
(BLAST)
001: MGLDVGRREE EEEEAASGDE EEGGKEDGEV RRGGVVERAS SIVSDEEENG LAKKKLRLSK EQSAFLEESF KEHNTLNPKQ KLALAKQLNL QPRQVEVWFQ
101: NRRARTKLKQ TEVDCEYLKR CCQTLTEENR RLQKEVAELR ALKTTHPFHM HLPATTLSMC PSCERVASTA ADHRPSSFAA LFSKPTPAAP RQPP
101: NRRARTKLKQ TEVDCEYLKR CCQTLTEENR RLQKEVAELR ALKTTHPFHM HLPATTLSMC PSCERVASTA ADHRPSSFAA LFSKPTPAAP RQPP
001: MELALSLGDN TKKQFSFMEK NSKINNPSVS STSTSEKDLG FCMALDVAFG GHRSLSSSSS PSVEDEKKKP APRAKKSDEF RVSSSVDPPL QLQLHFPNWL
101: PENSKGRQGG RMPLGAATVV EEEEEEEEAV PSMSVSPPDS VTSSFQLDFG IKSYGYERRS NKRDIDDEVE RSASRASNED NDDENGSTRK KLRLSKDQSA
201: FLEDSFKEHS TLNPKQKIAL AKQLNLRPRQ VEVWFQNRRA RTKLKQTEVD CEYLKRCCES LTEENRRLQK EVKELRTLKT STPFYMQLPA TTLTMCPSCE
301: RVATSAAQPS TSAAHNLCLS TSSLIPVKPR PAKQVS
101: PENSKGRQGG RMPLGAATVV EEEEEEEEAV PSMSVSPPDS VTSSFQLDFG IKSYGYERRS NKRDIDDEVE RSASRASNED NDDENGSTRK KLRLSKDQSA
201: FLEDSFKEHS TLNPKQKIAL AKQLNLRPRQ VEVWFQNRRA RTKLKQTEVD CEYLKRCCES LTEENRRLQK EVKELRTLKT STPFYMQLPA TTLTMCPSCE
301: RVATSAAQPS TSAAHNLCLS TSSLIPVKPR PAKQVS
Arabidopsis Description
HAT14Homeobox-leucine zipper protein HAT14 [Source:UniProtKB/Swiss-Prot;Acc:P46665]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.