Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 6
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| GSMUA_Achr3P15190_001 | Banana | nucleus | 48.24 | 51.9 |
| GSMUA_Achr9P09800_001 | Banana | nucleus | 47.84 | 50.62 |
| GSMUA_Achr8P26480_001 | Banana | nucleus | 52.55 | 47.69 |
| GSMUA_AchrUn_... | Banana | nucleus | 51.37 | 47.46 |
| GSMUA_Achr6P30180_001 | Banana | nucleus | 45.1 | 45.63 |
| GSMUA_Achr3P07740_001 | Banana | nucleus | 34.51 | 45.36 |
| VIT_18s0001g08410.t01 | Wine grape | nucleus | 47.45 | 44.81 |
| GSMUA_Achr4P06480_001 | Banana | nucleus | 29.02 | 44.58 |
| GSMUA_Achr9P26300_001 | Banana | nucleus | 44.71 | 44.19 |
| GSMUA_Achr6P31710_001 | Banana | nucleus | 49.02 | 43.71 |
| GSMUA_Achr7P15910_001 | Banana | nucleus | 26.27 | 43.51 |
| GSMUA_Achr7P27530_001 | Banana | nucleus | 43.53 | 43.19 |
| GSMUA_Achr11P... | Banana | nucleus | 41.18 | 42.51 |
| GSMUA_Achr10P... | Banana | nucleus | 29.8 | 41.76 |
| GSMUA_Achr8P05100_001 | Banana | nucleus | 44.71 | 40.14 |
| GSMUA_Achr7P02380_001 | Banana | nucleus | 45.1 | 39.93 |
| GSMUA_AchrUn_... | Banana | nucleus | 33.73 | 39.45 |
| GSMUA_Achr5P13530_001 | Banana | nucleus | 42.75 | 39.07 |
| GSMUA_Achr7P05000_001 | Banana | nucleus | 28.24 | 38.71 |
| GSMUA_Achr7P06950_001 | Banana | nucleus | 27.06 | 38.12 |
| GSMUA_Achr4P21600_001 | Banana | nucleus | 41.18 | 37.91 |
| GSMUA_Achr4P13440_001 | Banana | nucleus | 33.33 | 37.44 |
| GSMUA_Achr2P04490_001 | Banana | nucleus | 32.55 | 36.4 |
| GSMUA_Achr1P01670_001 | Banana | nucleus | 41.96 | 36.03 |
| GSMUA_Achr2P10040_001 | Banana | nucleus | 41.18 | 35.96 |
| KRH61469 | Soybean | nucleus | 40.78 | 35.86 |
| KRH15480 | Soybean | nucleus | 42.35 | 35.41 |
| GSMUA_Achr1P04360_001 | Banana | nucleus | 41.57 | 35.1 |
| KRG88660 | Soybean | nucleus | 42.35 | 34.95 |
| GSMUA_Achr1P10390_001 | Banana | nucleus | 31.37 | 34.48 |
| GSMUA_Achr8P22800_001 | Banana | nucleus | 35.29 | 33.96 |
| GSMUA_Achr9P15710_001 | Banana | nucleus | 40.0 | 32.69 |
| GSMUA_AchrUn_... | Banana | plastid | 40.0 | 32.69 |
Protein Annotations
| Gene3D:1.10.10.60 | MapMan:15.5.3.1 | ncoils:Coil | GO:GO:0003674 | GO:GO:0003676 | GO:GO:0003677 |
| GO:GO:0003700 | GO:GO:0005488 | GO:GO:0005575 | GO:GO:0005622 | GO:GO:0005623 | GO:GO:0005634 |
| GO:GO:0006139 | GO:GO:0006355 | GO:GO:0008150 | GO:GO:0008152 | GO:GO:0009058 | GO:GO:0009987 |
| GO:GO:0043565 | EnsemblPlantsGene:GSMUA_Achr4G01350_001 | EnsemblPlants:GSMUA_Achr4P01350_001 | EnsemblPlants:GSMUA_Achr4T01350_001 | InterPro:Homeobox-like_sf | InterPro:Homeobox_CS |
| InterPro:Homeobox_dom | InterPro:IPR001356 | InterPro:Leu_zip_homeo | UniProt:M0SK52 | PFAM:PF00046 | PFAM:PF02183 |
| ScanProsite:PS00027 | PFscan:PS50071 | PANTHER:PTHR24326 | PANTHER:PTHR24326:SF271 | SMART:SM00340 | SMART:SM00389 |
| SUPFAM:SSF46689 | UniParc:UPI000294EFFF | SEG:seg | : | : | : |
Description
Homeobox-leucine zipper protein HOX19 [Source:GMGC_GENE;Acc:GSMUA_Achr4G01350_001]
Coordinates
chr4:+:1097010..1098116
Molecular Weight (calculated)
28227.4 Da
IEP (calculated)
8.284
GRAVY (calculated)
-0.697
Length
255 amino acids
Sequence
(BLAST)
(BLAST)
001: MDINNSQDIR ETALSLGLGV GPTTTTSAEH LRPREPCSPL TNLASDQPSL ALSLSTDAYA ETAKAKEESR PAPASSSRSA VSSFSSPHAT IVLREKDVGS
101: DEAEEDEEDN GCVRKKLRLT KEQSAMLENR FKEHTSLNPK QKQALAKQLN LRPRQVEVWF QNRRARTKLK QTEVDCEILR RCYEKLTAEN QRLRKELQEM
201: KSLRFSAPSP LYMQIPAATL ALCPSCQRIN GSEAGSDAAP KPGLFLNPIT HPAPC
101: DEAEEDEEDN GCVRKKLRLT KEQSAMLENR FKEHTSLNPK QKQALAKQLN LRPRQVEVWF QNRRARTKLK QTEVDCEILR RCYEKLTAEN QRLRKELQEM
201: KSLRFSAPSP LYMQIPAATL ALCPSCQRIN GSEAGSDAAP KPGLFLNPIT HPAPC
001: MGFDDTCNTG LVLGLGPSPI PNNYNSTIRQ SSVYKLEPSL TLCLSGDPSV TVVTGADQLC RQTSSHSGVS SFSSGRVVKR ERDGGEESPE EEEMTERVIS
101: DYHEDEEGIS ARKKLRLTKQ QSALLEESFK DHSTLNPKQK QVLARQLNLR PRQVEVWFQN RRARTKLKQT EVDCEFLKKC CETLADENIR LQKEIQELKT
201: LKLTQPFYMH MPASTLTKCP SCERIGGGGG GNGGGGGGSG ATAVIVDGST AKGAFSISSK PHFFNPFTNP SAAC
101: DYHEDEEGIS ARKKLRLTKQ QSALLEESFK DHSTLNPKQK QVLARQLNLR PRQVEVWFQN RRARTKLKQT EVDCEFLKKC CETLADENIR LQKEIQELKT
201: LKLTQPFYMH MPASTLTKCP SCERIGGGGG GNGGGGGGSG ATAVIVDGST AKGAFSISSK PHFFNPFTNP SAAC
Arabidopsis Description
HAT9HAT9 [Source:UniProtKB/TrEMBL;Acc:A0A178VZE8]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.