Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 6
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
Inferred distinct locusB in Crop
Inferred from Arabidopsis experimental PPI
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Os09t0447000-00 | Rice | nucleus | 28.82 | 92.22 |
| GSMUA_Achr3P07740_001 | Banana | nucleus | 45.83 | 68.04 |
| GSMUA_Achr4P06480_001 | Banana | nucleus | 30.9 | 53.61 |
| GSMUA_Achr9P15710_001 | Banana | nucleus | 57.99 | 53.53 |
| GSMUA_AchrUn_... | Banana | nucleus | 36.81 | 48.62 |
| GSMUA_Achr11P... | Banana | nucleus | 40.62 | 47.37 |
| GSMUA_Achr4P21600_001 | Banana | nucleus | 44.44 | 46.21 |
| KRH67080 | Soybean | nucleus | 46.18 | 46.18 |
| GSMUA_Achr7P15910_001 | Banana | nucleus | 24.65 | 46.1 |
| VIT_08s0007g06670.t01 | Wine grape | nucleus | 52.78 | 45.92 |
| GSMUA_Achr8P22800_001 | Banana | nucleus | 42.01 | 45.66 |
| GSMUA_Achr3P15190_001 | Banana | nucleus | 37.5 | 45.57 |
| KRG95402 | Soybean | nucleus, plastid | 46.18 | 45.55 |
| GSMUA_Achr4P01350_001 | Banana | nucleus | 39.93 | 45.1 |
| GSMUA_Achr4P13440_001 | Banana | nucleus | 35.42 | 44.93 |
| Zm00001d020670_P001 | Maize | nucleus | 51.74 | 44.74 |
| CDX81016 | Canola | nucleus | 40.28 | 44.62 |
| KRH71831 | Soybean | plastid | 50.0 | 43.77 |
| VIT_13s0156g00260.t01 | Wine grape | nucleus | 54.17 | 43.58 |
| GSMUA_Achr9P09800_001 | Banana | nucleus | 36.46 | 43.57 |
| KRH38083 | Soybean | nucleus | 49.31 | 43.43 |
| GSMUA_Achr5P13530_001 | Banana | nucleus | 42.01 | 43.37 |
| TraesCS5D01G235300.1 | Wheat | nucleus | 50.69 | 43.07 |
| GSMUA_Achr7P06950_001 | Banana | nucleus | 26.74 | 42.54 |
| TraesCS5A01G232700.1 | Wheat | nucleus | 50.69 | 41.6 |
| EER98990 | Sorghum | nucleus | 53.12 | 41.46 |
| TraesCS5B01G231300.1 | Wheat | nucleus | 51.04 | 41.41 |
| GSMUA_AchrUn_... | Banana | nucleus | 39.58 | 41.3 |
| Zm00001d005875_P001 | Maize | nucleus | 46.53 | 41.23 |
| GSMUA_Achr1P01670_001 | Banana | nucleus | 42.36 | 41.08 |
| GSMUA_Achr8P26480_001 | Banana | nucleus | 39.58 | 40.57 |
| GSMUA_AchrUn_... | Banana | plastid | 43.75 | 40.38 |
| GSMUA_Achr9P26300_001 | Banana | nucleus | 36.11 | 40.31 |
| Solyc01g073910.2.1 | Tomato | nucleus | 51.04 | 40.27 |
| PGSC0003DMT400016146 | Potato | nucleus | 51.74 | 39.95 |
| Bra005907.1-P | Field mustard | nucleus | 44.44 | 39.75 |
| GSMUA_Achr2P10040_001 | Banana | nucleus | 40.28 | 39.73 |
| PGSC0003DMT400060951 | Potato | nucleus | 48.26 | 39.6 |
| Solyc10g080540.1.1 | Tomato | nucleus | 48.61 | 39.55 |
| GSMUA_Achr8P05100_001 | Banana | nucleus | 38.89 | 39.44 |
| GSMUA_Achr6P30180_001 | Banana | nucleus | 34.38 | 39.29 |
| CDY55775 | Canola | nucleus | 43.75 | 39.13 |
| GSMUA_Achr10P... | Banana | nucleus | 24.65 | 39.01 |
| CDX98948 | Canola | nucleus | 45.83 | 38.94 |
| GSMUA_Achr7P05000_001 | Banana | nucleus | 25.0 | 38.71 |
| GSMUA_Achr7P27530_001 | Banana | nucleus | 34.38 | 38.52 |
| CDX70076 | Canola | nucleus | 45.14 | 38.24 |
| Bra009219.1-P | Field mustard | nucleus | 45.14 | 38.24 |
| KRH43419 | Soybean | nucleus | 50.0 | 38.2 |
| AT5G06710.1 | Thale cress | nucleus | 44.44 | 38.1 |
| KRH13873 | Soybean | nucleus | 50.35 | 37.76 |
| GSMUA_Achr1P04360_001 | Banana | nucleus | 39.58 | 37.75 |
| GSMUA_Achr6P31710_001 | Banana | nucleus | 37.15 | 37.41 |
| KXG25294 | Sorghum | nucleus | 49.31 | 37.17 |
| GSMUA_Achr2P04490_001 | Banana | nucleus | 29.17 | 36.84 |
| GSMUA_Achr1P10390_001 | Banana | nucleus | 29.51 | 36.64 |
| HORVU5Hr1G067010.2 | Barley | nucleus | 49.65 | 36.39 |
| Zm00001d031745_P001 | Maize | plastid | 50.35 | 32.73 |
| CDX78884 | Canola | nucleus | 26.74 | 30.56 |
Protein Annotations
| Gene3D:1.10.10.60 | MapMan:15.5.3.1 | ncoils:Coil | GO:GO:0003674 | GO:GO:0003676 | GO:GO:0003677 |
| GO:GO:0003700 | GO:GO:0005488 | GO:GO:0005575 | GO:GO:0005622 | GO:GO:0005623 | GO:GO:0005634 |
| GO:GO:0006139 | GO:GO:0006355 | GO:GO:0008150 | GO:GO:0008152 | GO:GO:0009058 | GO:GO:0009987 |
| GO:GO:0043565 | EnsemblPlantsGene:GSMUA_Achr7G02380_001 | EnsemblPlants:GSMUA_Achr7P02380_001 | EnsemblPlants:GSMUA_Achr7T02380_001 | InterPro:Homeobox-like_sf | InterPro:Homeobox_CS |
| InterPro:Homeobox_dom | InterPro:IPR001356 | InterPro:Leu_zip_homeo | UniProt:M0TE28 | PFAM:PF00046 | PFAM:PF02183 |
| ScanProsite:PS00027 | PFscan:PS50071 | PANTHER:PTHR24326 | PANTHER:PTHR24326:SF105 | SMART:SM00340 | SMART:SM00389 |
| SUPFAM:SSF46689 | UniParc:UPI000296EC72 | SEG:seg | : | : | : |
Description
Whole genome shotgun sequence of line PN40024, scaffold_7.assembly12x (Fragment) [Source:GMGC_GENE;Acc:GSMUA_Achr7G02380_001]
Coordinates
chr7:-:1864595..1866130
Molecular Weight (calculated)
32052.9 Da
IEP (calculated)
7.883
GRAVY (calculated)
-0.773
Length
288 amino acids
Sequence
(BLAST)
(BLAST)
001: MRLVVGRGGK DEDEERRVEE EEEETEEGRG LAEAPLQLSL LPLLPVPPQQ PSSPQLRLPW TTETSKNPDE KNLDASMRGF DMNHAPSAVA ADEAASSSSS
101: PKREATTVEI GSLRVSDEEE NGLGRKKLRL TKEQSAFLEE SFKEHNTLNP KQKLALAKQL NLRPRQVEVW FQNRRARTKL KQTEVDCEYL RRCCQTLTEE
201: NRRLQKEVAE LRALKTSRPF YMHVPATTLS MCPACERVAS TTTIPTAPAT PSADHRPNSF AALFSKPVAL QSGSRTAPSA PRLPSPAS
101: PKREATTVEI GSLRVSDEEE NGLGRKKLRL TKEQSAFLEE SFKEHNTLNP KQKLALAKQL NLRPRQVEVW FQNRRARTKL KQTEVDCEYL RRCCQTLTEE
201: NRRLQKEVAE LRALKTSRPF YMHVPATTLS MCPACERVAS TTTIPTAPAT PSADHRPNSF AALFSKPVAL QSGSRTAPSA PRLPSPAS
001: MELALSLGDN TKKQFSFMEK NSKINNPSVS STSTSEKDLG FCMALDVAFG GHRSLSSSSS PSVEDEKKKP APRAKKSDEF RVSSSVDPPL QLQLHFPNWL
101: PENSKGRQGG RMPLGAATVV EEEEEEEEAV PSMSVSPPDS VTSSFQLDFG IKSYGYERRS NKRDIDDEVE RSASRASNED NDDENGSTRK KLRLSKDQSA
201: FLEDSFKEHS TLNPKQKIAL AKQLNLRPRQ VEVWFQNRRA RTKLKQTEVD CEYLKRCCES LTEENRRLQK EVKELRTLKT STPFYMQLPA TTLTMCPSCE
301: RVATSAAQPS TSAAHNLCLS TSSLIPVKPR PAKQVS
101: PENSKGRQGG RMPLGAATVV EEEEEEEEAV PSMSVSPPDS VTSSFQLDFG IKSYGYERRS NKRDIDDEVE RSASRASNED NDDENGSTRK KLRLSKDQSA
201: FLEDSFKEHS TLNPKQKIAL AKQLNLRPRQ VEVWFQNRRA RTKLKQTEVD CEYLKRCCES LTEENRRLQK EVKELRTLKT STPFYMQLPA TTLTMCPSCE
301: RVATSAAQPS TSAAHNLCLS TSSLIPVKPR PAKQVS
Arabidopsis Description
HAT14Homeobox-leucine zipper protein HAT14 [Source:UniProtKB/Swiss-Prot;Acc:P46665]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.