Factsheet for GSMUA_Achr1P10390_001

Subcellular Localization

min:

: max

Winner_takes_all: nucleus

Predictor Summary:

nucleus 6
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	nucleus
Any Predictor:	mitochondrion, nucleus
BaCelLo:	nucleus
EpiLoc:	nucleus
MultiLoc:	nucleus
Plant-mPloc:	nucleus
PProwler:	mitochondrion
WoLF PSORT:	nucleus
YLoc:	nucleus

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
GSMUA_Achr2P04490_001	Banana	nucleus	64.66	65.79
GSMUA_Achr7P15910_001	Banana	nucleus	31.9	48.05
GSMUA_Achr10P...	Banana	nucleus	34.48	43.96
Zm00001d038941_P001	Maize	nucleus	14.22	42.31
GSMUA_Achr4P06480_001	Banana	nucleus	27.16	37.95
KRH19131	Soybean	nucleus	34.48	37.56
TraesCS6D01G110400.1	Wheat	nucleus	30.6	36.98
KRH02731	Soybean	nucleus	33.19	36.84
TraesCS6A01G120300.1	Wheat	nucleus	31.9	36.45
KRH12370	Soybean	nucleus	35.34	36.28
GSMUA_Achr3P07740_001	Banana	nucleus	30.17	36.08
GSMUA_Achr7P05000_001	Banana	nucleus	28.88	36.02
PGSC0003DMT400096970	Potato	nucleus	30.6	35.86
TraesCS6B01G148700.1	Wheat	nucleus	31.9	35.41
KRH37372	Soybean	nucleus	35.78	35.02
TraesCS6B01G148800.1	Wheat	nucleus	31.47	34.93
TraesCSU01G087400.1	Wheat	nucleus	31.47	34.93
TraesCS7A01G423800.1	Wheat	nucleus	32.76	34.7
GSMUA_Achr7P27530_001	Banana	nucleus	38.36	34.63
Solyc07g054380.1.1	Tomato	nucleus	30.6	34.3
GSMUA_Achr3P15190_001	Banana	nucleus	34.48	33.76
TraesCS7B01G326300.1	Wheat	nucleus	32.33	33.63
TraesCS6A01G120600.1	Wheat	nucleus	32.76	33.63
GSMUA_AchrUn_...	Banana	nucleus	31.47	33.49
TraesCS7D01G417700.1	Wheat	nucleus	31.9	33.33
TraesCS6B01G149000.1	Wheat	nucleus	31.47	33.18
TraesCS6D01G110600.1	Wheat	nucleus	31.9	32.89
HORVU7Hr1G098230.1	Barley	nucleus	31.47	32.59
HORVU5Hr1G049790.1	Barley	nucleus	31.47	32.59
Zm00001d014629_P001	Maize	nucleus	32.76	32.48
GSMUA_Achr11P...	Banana	nucleus	34.48	32.39
GSMUA_Achr8P26480_001	Banana	nucleus	38.79	32.03
GSMUA_Achr9P09800_001	Banana	nucleus	33.19	31.95
GSMUA_AchrUn_...	Banana	nucleus	37.93	31.88
GSMUA_Achr4P13440_001	Banana	nucleus	31.03	31.72
GSMUA_Achr4P01350_001	Banana	nucleus	34.48	31.37
EER90307	Sorghum	nucleus	31.9	31.36
GSMUA_Achr6P30180_001	Banana	nucleus	34.05	31.35
Zm00001d014628_P001	Maize	nucleus	29.74	31.22
GSMUA_Achr8P05100_001	Banana	nucleus	37.5	30.63
GSMUA_Achr5P13530_001	Banana	nucleus	36.21	30.11
Os06t0698200-00	Rice	nucleus	33.19	30.08
GSMUA_Achr4P21600_001	Banana	nucleus	35.78	29.96
GSMUA_Achr9P26300_001	Banana	nucleus	33.19	29.84
Os02t0149900-00	Rice	nucleus	31.9	29.84
GSMUA_Achr2P10040_001	Banana	nucleus	37.5	29.79
HORVU6Hr1G021870.1	Barley	nucleus, plastid	31.47	29.67
Zm00001d014630_P001	Maize	nucleus	31.47	29.55
GSMUA_Achr7P02380_001	Banana	nucleus	36.64	29.51
GSMUA_Achr6P31710_001	Banana	nucleus	35.78	29.02
GSMUA_Achr8P22800_001	Banana	nucleus	32.76	28.68
GSMUA_Achr1P01670_001	Banana	nucleus	36.64	28.62
GSMUA_Achr9P15710_001	Banana	nucleus	37.93	28.21
GSMUA_Achr7P06950_001	Banana	nucleus	21.55	27.62
Zm00001d036510_P001	Maize	nucleus	29.74	27.17
Zm00001d000303_P001	Maize	nucleus	30.6	26.39
EES04526	Sorghum	nucleus	29.31	26.25
GSMUA_Achr1P04360_001	Banana	nucleus	34.05	26.16
GSMUA_AchrUn_...	Banana	plastid	34.91	25.96
Zm00001d009802_P001	Maize	nucleus, plastid	17.24	22.73
Zm00001d007525_P001	Maize	plasma membrane	21.55	18.12

Protein Annotations

Gene3D:1.10.10.60	MapMan:15.5.3.1	ncoils:Coil	GO:GO:0003674	GO:GO:0003676	GO:GO:0003677
GO:GO:0003700	GO:GO:0005488	GO:GO:0005575	GO:GO:0005622	GO:GO:0005623	GO:GO:0005634
GO:GO:0006139	GO:GO:0006355	GO:GO:0008150	GO:GO:0008152	GO:GO:0009058	GO:GO:0009987
GO:GO:0043565	EnsemblPlantsGene:GSMUA_Achr1G10390_001	EnsemblPlants:GSMUA_Achr1P10390_001	EnsemblPlants:GSMUA_Achr1T10390_001	InterPro:Homeobox-like_sf	InterPro:Homeobox_CS
InterPro:Homeobox_dom	InterPro:IPR001356	InterPro:Leu_zip_homeo	UniProt:M0RYP8	PFAM:PF00046	PFAM:PF02183
ScanProsite:PS00027	PFscan:PS50071	PANTHER:PTHR24326	PANTHER:PTHR24326:SF252	SMART:SM00340	SMART:SM00389
SUPFAM:SSF46689	UniParc:UPI000296C208	SEG:seg	:	:	:

Description

Hypothetical protein [Source:GMGC_GENE;Acc:GSMUA_Achr1G10390_001]

Coordinates

chr1:-:7847346..7848344

Molecular Weight (calculated)

26718.7 Da

IEP (calculated)

6.946

GRAVY (calculated)

-0.864

Length

232 amino acids

Sequence
(BLAST)

001: MEEGDCNTSL SLAIGGGRQF TPSTSLHVLF PHHPKQEEEE EEDTHRHVGS VSRWKELDEE EEEEDGVSGK DDSSNLSDDK PVGTRKKLKL TIEQVRLLED
101: SFRHRSTLNT TQKQDLAHRL NIRPRQVEVW FQNRRARTKL KRIELDYECL RMHCDRLIDE NRRLKKELQE LRSATPASPF YVQLLEAATL IMCPACERIA
201: AAGKRKSSAL EDGMKRPPQL VPVNTALLRL QN

Best Arabidopsis Sequence Match ( AT5G06710.1 )
(BLAST)

001: MELALSLGDN TKKQFSFMEK NSKINNPSVS STSTSEKDLG FCMALDVAFG GHRSLSSSSS PSVEDEKKKP APRAKKSDEF RVSSSVDPPL QLQLHFPNWL
101: PENSKGRQGG RMPLGAATVV EEEEEEEEAV PSMSVSPPDS VTSSFQLDFG IKSYGYERRS NKRDIDDEVE RSASRASNED NDDENGSTRK KLRLSKDQSA
201: FLEDSFKEHS TLNPKQKIAL AKQLNLRPRQ VEVWFQNRRA RTKLKQTEVD CEYLKRCCES LTEENRRLQK EVKELRTLKT STPFYMQLPA TTLTMCPSCE
301: RVATSAAQPS TSAAHNLCLS TSSLIPVKPR PAKQVS

Arabidopsis Description

HAT14Homeobox-leucine zipper protein HAT14 [Source:UniProtKB/Swiss-Prot;Acc:P46665]
SUBAcon: [nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.