Factsheet for HORVU6Hr1G021870.1

Subcellular Localization

min:

: max

Winner_takes_all: plastid, nucleus

Predictor Summary:

plastid 2
mitochondrion 1
nucleus 2

Predictors

GFP

MS/MS

Papers

Winner Takes All:	nucleus, plastid
Any Predictor:	mitochondrion, nucleus, plastid
ChloroP:	plastid
iPSORT:	mitochondrion
MultiLoc:	nucleus
TargetP:	plastid
YLoc:	nucleus

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS6A01G120600.1	Wheat	nucleus	82.52	89.82
TraesCS6D01G110600.1	Wheat	nucleus	81.71	89.33
TraesCS6B01G149000.1	Wheat	nucleus	78.05	87.27
GSMUA_Achr7P15910_001	Banana	nucleus	29.67	47.4
GSMUA_Achr10P...	Banana	nucleus	32.52	43.96
Os02t0149900-00	Rice	nucleus	41.46	41.13
HORVU7Hr1G098230.1	Barley	nucleus	36.18	39.73
HORVU5Hr1G049790.1	Barley	nucleus	36.18	39.73
EES04526	Sorghum	nucleus	40.65	38.61
PGSC0003DMT400096970	Potato	nucleus	30.49	37.88
Zm00001d000303_P001	Maize	nucleus	40.24	36.8
Solyc07g054380.1.1	Tomato	nucleus	30.49	36.23
HORVU3Hr1G000250.1	Barley	nucleus	30.49	35.71
GSMUA_Achr7P05000_001	Banana	nucleus	25.2	33.33
GSMUA_Achr2P04490_001	Banana	nucleus	30.08	32.46
HORVU2Hr1G097940.2	Barley	nucleus	29.27	32.0
GSMUA_Achr1P10390_001	Banana	nucleus	29.67	31.47
KRH19131	Soybean	nucleus	27.24	31.46
KRH12370	Soybean	nucleus	28.46	30.97
KRH02731	Soybean	nucleus	25.61	30.14
KRH37372	Soybean	nucleus	28.46	29.54
HORVU4Hr1G065900.5	Barley	nucleus	31.3	27.4
HORVU1Hr1G082910.2	Barley	nucleus	30.08	23.64
HORVU1Hr1G055930.1	Barley	nucleus	33.74	22.99
HORVU5Hr1G067010.2	Barley	nucleus	34.55	21.63
HORVU7Hr1G018780.2	Barley	nucleus	28.86	20.58

Protein Annotations

Gene3D:1.10.10.60	MapMan:15.5.3.1	UniProt:A0A287TK68	ncoils:Coil	GO:GO:0003674	GO:GO:0003676
GO:GO:0003677	GO:GO:0003700	GO:GO:0005488	GO:GO:0005575	GO:GO:0005622	GO:GO:0005623
GO:GO:0005634	GO:GO:0006139	GO:GO:0006355	GO:GO:0008150	GO:GO:0008152	GO:GO:0009058
GO:GO:0009987	GO:GO:0043565	EnsemblPlantsGene:HORVU6Hr1G021870	EnsemblPlants:HORVU6Hr1G021870.1	InterPro:Homeobox-like_sf	InterPro:Homeobox_CS
InterPro:Homeobox_dom	InterPro:IPR001356	InterPro:Leu_zip_homeo	PFAM:PF00046	ScanProsite:PS00027	PFscan:PS50071
PANTHER:PTHR24326	PANTHER:PTHR24326:SF219	SMART:SM00340	SMART:SM00389	SUPFAM:SSF46689	UniParc:UPI000B47444F
SEG:seg	:	:	:	:	:

Description

No Description!

Coordinates

chrchr6H:+:67890437..67891667

Molecular Weight (calculated)

27032.0 Da

IEP (calculated)

9.613

GRAVY (calculated)

-0.591

Length

246 amino acids

Sequence
(BLAST)

001: GNLGSPSTYS KLTSAPYTAM SSLTTISGGA MEVSQEVVEL VDTRLSLVIG AASRPPPTVL ALLPATSPEN EAVKRVKRKG VKEPENGAGG AVATSREHSK
101: RANTVHDSSD VDDDDGRDAS RGDATRKKLR LTVEQAALLE DSFRAHNVLS HGEKHDLARQ LWLKPRQVEV WFQNRRARTK LKQTELDCEL LRRWCERLSE
201: DNARLRRELA ETLASPPAFL SRLTMTNDKT AVCSSCNKLT SARMPA

Best Arabidopsis Sequence Match ( AT5G06710.1 )
(BLAST)

001: MELALSLGDN TKKQFSFMEK NSKINNPSVS STSTSEKDLG FCMALDVAFG GHRSLSSSSS PSVEDEKKKP APRAKKSDEF RVSSSVDPPL QLQLHFPNWL
101: PENSKGRQGG RMPLGAATVV EEEEEEEEAV PSMSVSPPDS VTSSFQLDFG IKSYGYERRS NKRDIDDEVE RSASRASNED NDDENGSTRK KLRLSKDQSA
201: FLEDSFKEHS TLNPKQKIAL AKQLNLRPRQ VEVWFQNRRA RTKLKQTEVD CEYLKRCCES LTEENRRLQK EVKELRTLKT STPFYMQLPA TTLTMCPSCE
301: RVATSAAQPS TSAAHNLCLS TSSLIPVKPR PAKQVS

Arabidopsis Description

HAT14Homeobox-leucine zipper protein HAT14 [Source:UniProtKB/Swiss-Prot;Acc:P46665]
SUBAcon: [nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.